mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTTGTGTTTTATTTTGTTTTA TAGCATATAAAGCCAGAAC GGGGAGGACACTTTTAGTCATTTTGTGTTTTATTTTGTTTTACAGCATAGCATATAAAGCCAGAACAGGACAAAGGGAGTGCGA GTGTGCGGTGCGCGCTCGAGCTATTGAACAGTTTTCGCTAAAGGAGACACACCTCGAGCCGAAGAAGTGTTCCGGAGACGCACTAATGGTGCTCGAACCACTTTGTCATTTTAAATAATAAACGAGCAGAGTTGGGAAAGTCGCGTCGGGTTCTACTTTGAGATCCGTGTGGTCCTGGAAGGAGTGTCATGGCAGAACCGGACTACCTGGAGGGAGACTGTGATGAGCTCATCCAACCCAAAAAGCTGATTAATCCAGTCAAGAGCTCCCGAAACCACCAGGACCTACACAGAGAGCTTATTATGAACCAAAAGAGGGGCCTTGCTCCTCAGAACAAGCCAGAGCTCCAGAAGGTTCTAGAGAAGAGGAAGAGAGAACAAGTTATCAAGGCCCAAAAGGAGGAGCAGGAGGCTCACAAGAAGAGAAGCGACCTGGAAATAGAGCTCATGAAAAGACAACAGAAACTAGAGCAGCTTGAACTGGAGCAGCAGAAAATTCAGGAGGAGCAGGAAAACACCCCTGAGTTTGTGAAGATGAAGGGCAACCTGCGCCGCACCAAGCAGGAAGCCGGCGGTGAGGAGCAAGCCACCTAAAATCCAGCCAGGGTGTCTGGGTCTGGCTGACTGAGAAGCCAAGGAGTGTGTGTTGTGTCTATGGTAACACGGTGGTGACCTGACCAAGATGAGCCTCTTGGCGTTCCTTTACCCAGCTGTTCCTTCCTGCAGCGAGGAGAGAGACTTTAGAGACTAAAGACCCCCCACCCAACCCCTTCTTTCTCCCTGCAATGGACCGCCAGCACTCGCACCTGTCCAGCAGTACGCAGCACCCCCACTCACAGGAGGCACCTAACAGACATGTTACACGCTTTTCAACACGGGCCACCAAGCTTCCAATGAGCTTTAGTGGAGGAAATGAACCAAACCCAATCTGTCTTTGCTCTTTTTTTCCTTTGCGAGCTGTCGTTTTTATTTCCTGTTATCAGTGTTGTCATTATTGTTTTTGTTGCTCATATTCACAATCATAGAAAAAAATCAAAAAGTGGACACTGGATGGACTTTTAAAGCTGTGTAAAATAAAAGCCAAACAAATGTGCTTTTTGTTATTTATGTTGGTAGCTTTTAGCCCAGGTGTAGGGGAGGACACTTTTAGTCATTTTGTGTTTTATTTTGTTTTACAGCATAGCATATAAAGCCAGAACAGGACAAAGGGAGTGCGAGGTTGTGTGAAAATATGCTTTGTTTTATTTTATTTTATTTTTTTAAATGTACATGATATTTCCTCAGCTAATGCAATTTTAAGCAATAGTAGAACTCCCAGGCATGAGAGGGATTTTTTCTTTATATATTTTATTGTTTTGTATGAAAAAATGTGTTACTTAATAAATAATTTACATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4 2 5' arm Poecilia_reticulata mirnest 100 100 -16 ........(((((((.(((.(((((.(((((((..((((.........)))).))))))))))))...)))...)))))))... (-16)