mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTGGTCCCCAGCACCCAGCAG TGCTGAGGCTGGTGCTGGAG TTCGCAACGTAACCATCAACTTTGGTCCCCAGCACCCAGCAGCCCACGGTGTGCTGAGGCTGGTGCTGGAGCTGGATGGTGAGACTGTG CCGGGCAAGATGGCTGCGGGTGTACTGGGCGGCTTCGGCCAAAAACTGCTTACTGCTGCCTTCTGCGGCGGCTCTCGTGGCTTCATAAAGAACGCTGCTGCTGGTTACTATGCCAACCGTGGAGGAGCCACTTGGGCACCAGATTATGAATGGATCAAGCAGTTTGAGGGTCCAATTCTTCTGCCCCCGGAAGAGCAGGACAATCTTCCACCACCTCTTTGGATGCAGAGGAAACCCCCGTTTGAGAAAAAGATTCGCAACGTAACCATCAACTTTGGTCCCCAGCACCCAGCAGCCCACGGTGTGCTGAGGCTGGTGCTGGAGCTGGATGGTGAGACTGTGATGCGTGCAGATCCCCACATTGGGCTGCTGCACCGAGGAACAGAGAAGCTCATTGAATACAAGACATACACGCAGGCTCTTCCATACTTTGACCGTCTTGACTATGTGTCCATGATGTGCAATGAACAGGCATATTCGCTGGCTGTGGAGAAACTGCTCGGCCTGGAGGCTCCCATCAGGGCCAAGTACATCCGTACCATGTTTGCTGAGGTTACACGCATCTTGAATCACTGCATGTTCTTGGGGGCTCACGCTATGGATGTGGGCGCCCTCACTCCTTTCCTGTGGCTCTTTGAGGAACGTGAGAAGATGATGGAGTTCTATGAGAGAGCTTCTGGTGCTCGCCTTCATGCAGCCTACGTTCGTCCTGGTGGAGTGGCCATTGACATCCCATTGGCCTC 4 2 5' arm Carcinus_maenas mirnest 100 100 -31.2 ...(((..((.((((((..(((((((..(((((...((((.(((...)))..))))..))))).)))))))...))))))...))))). (-31.2)