mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AACATTCATTGCTGTCGGTGG ACCGATGGATGAATGTCAC CCTAAAACAAAGGTCACAATCAACATTCATTGCTGTCGGTGGGTTGTGAGATGTGAGGCANAACTCACCGATGGATGAATGTCACTGTGGCTGGGCCAGACTT GTGGTGCTTCTCCCCCTCCAGCATGGTCATGGAGCTATTACCTTAACTCCCCTGGGTTCCTGTGCAGCCTGGTGTCCTGTCCCAGAGGCTGCTTTCAACTCAGAGGAGTGATGGGGAAAGGGAGCCAGAGTAGGGAGGGTGTTTGGGACTCTCACCACCAGCCCTCTCTTTCTGCCTTCAAGGAGCCTGCATCCCATGAGATGCCAAAGGTTTGGGGGAACATTCAACGCTGTCGGTGAGTTTGAGCAGCTGAAGGCAAACCATCGACCGTTGAGTGGACCCTGCAACCTTAAACTACCACCTGATGCCTTCCAGGGAGCCCAGGTCACTGACAAGGTGCAGACCTTTCCTCTTATACCACAGGCCATATGTTACCTGGAATTTTCTGGATTCCTTGTCTCAATTTTGACCTTCAGAACATTTTTCCCACCCCTCAAATGTCATCTGCCTATGGTAGACTACACTATTGCCTTAACTGGATGAATCCAGGCTAAATCTCCAGGCTTCGAGCCATACTTCCCAATCCTAGGTCGTTTTGCCCACCTAAAACAAAGGTCACAATCAACATTCATTGCTGTCGGTGGGTTGTGAGATGTGAGGCANAACTCACCGATGGATGAATGTCACTGTGGCTGGGCCAGACTTGGACCTGNAGAGACAAGGATTGGACATCANAGGGAGGAAAAGAGACTGCACCAGCTNTGATCGAGCTCCATTGGGTCAAGGAGACCACANAGCANTAGGGGAG 1 2 5' arm Macropus_eugenii mirnest mir-181 2e-30 hsa-mir-181d 2e-23 -34.9 ...........(((((((....((((((((..(((((((((((((.((..........)).)))))))))))))))))))))...)))))))........... (-34.9)