mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TTGAAGATGATTTTGGTGTCA GCACCAGGTCCATCGCAAGA GGCACCAGGTCCATCGCAAGAAAGAAAAACACTCACGAAGGAGGTCAAGATCTCGGTCACGTTCCCATAGCTCGGACTCTTCGTTTGAAGATGATTTTGGTGTCAAGAAGGAGA GGCACCAGGTCCATCGCAAGAAAGAAAAACACTCACGAAGGAGGTCAAGATCTCGGTCACGTTCCCATAGCTCGGACTCTTCGTTTGAAGATGATTTTGGTGTCAAGAAGGAGACCCTCCTGCATGGATCCTACGCAGATTACATCAAAGAGTACACATCTCGTTCTGGAGGAGGTGGAGCTTCGGCGTCTGGTGGGCAGAGTCAAGGTGGGTCTGGCAGTAGTGGAAAAGCAATGCCATCAATG 4 1 3' arm Suberites_domuncula mirnest 100 100 -26.6 (((((((((..((((.(((...............((((((..((((..((.((.((........))..)).)).)))))))))))))..))))..))))))))).......... (-26.6)