mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGTTCTTCAGTGGCAAGCTTT AGCTGCCAGTTGAAGAACTGT CCAGCACCAGGAGCCTGTTCCTCTCACGCCCTCACCTGGCTGAGCCGCAGTAGTTCTTCAGTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTCTGCCCCTGGCTTCGAGGAGGAGGAGGAGCTGCTTTCCCCAT AAGAGACAGCGCCGCCGGCCGTGGGGAGCGGACGCAGTGATTTGCTCCCCCTCGTGCAGCAACCCCCACACCCAGCACCAGGAGCCTGTTCCTCTCACGCCCTCACCTGGCTGAGCCGCAGTAGTTCTTCAGTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTCTGCCCCTGGCTTCGAGGAGGAGGAGGAGCTGCTTTCCCCATCATCTGGAAGGTGACAGAAATGGGCTGGGAAGGTCCGGACAGCAGGGTGGATGATAACATTTTGGGCAAGTTGGAGAGCCTTTGCCCAGATTGGCCCGGCAAGGAGCGGTTTTAGATTAGAGACACTGGCTGGATTGAGGAGTAGAAGGCTCAAACAACCCAAGGTTAGTTGGTCTTTGTGTGACAGTGCGAAGAAGTGGAGAGAACACTCTGTCTCCCCGACTTCCTTCTTGACCCTCCTTCCGTATCTTTCATTCTTCCCCACTGGCCTTTCCAGATGAGG 0 2 5' arm Pan_troglodytes_verus mirnest mir-22 1e-41 mmu-mir-22 9e-49 -55.6 .........(((((..((((((((.....((((.((.(((.(((..((((((((((((((((((((.((((((....(((...))).))))))))))).))))))))))))))).))).)))...))....))))....)))))))).)))))...... (-55.6)