mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GTGTGCGGAAATGCTTCTGC AGAATCCTTTCTGCACAAACTA GTCTGCCCCCCCATCAGTCTAACAGAATCCTTTCTGCACAAACTAGGACGCTTTGACACTCAGTGTGCGGAAATGCTTCTGCTCCACTGGTGGGGTTTCACC CGCTGAGAGACGTCAAGGACTTCTTTGCAACAACAGGTATTTGAGAAAGCTGAAAAAATGAGTGGATTTTTCCAGCTGTTGAGAAAGAGAAAGGAGCTGATCCCTCTGGTCGGGTTCATGGCTTTTGCTGCAACAGGAGCTACCTCTGCTGCGATCTACTTTCTATTTACTAAACCTGATGTAATTTTGAATAAGACCAGAAACCCAGAACCATGGGAGAGAATAGACCCAACAAAACCCCAAAAGCTCATCACCATAAATCAGCAGTGGAAACCAGTGGAGGAGCTGGAGCTGGTGAGGAAGCTCACCAAGTAAAGAAAAGGCGGGCATCTGCTAGAAAGGTCCACAGTCTGACTACCTGTCTGCCCCCCCATCAGTCTAACAGAATCCTTTCTGCACAAACTAGGACGCTTTGACACTCAGTGTGCGGAAATGCTTCTGCTCCACTGGTGGGGTTTCACCCTGCTAAGCCCAAGGACGCCCATCCACAGCAGTAGAAACCGGTGGTAACAGATATAACTCATACTGTCATGAAGTCAAGGNGAAAAAAGACTTAGTCTGGATTTGTGTGCGTAGANTTATATTGAATAAACTGCATTAATGTGACA 4 2 3' arm Lates_calcarifer mirnest mir-147 7e-30 gga-mir-147-1 0.000001 -30.9 ........((((((((((....(((((...(((((((((..(((.((...........)).))))))))))))...)))))....))))))))))....... (-30.9)