mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure CGGGTGTGGTGGTGGGCGGAG CTGTTCAGATACTATTCTGAG TTGGTCTGGCCCTCATGTTGTCGGGTGTGGTGGTGGGCGGAGTTTATCTGTTCAGATACTATTCTGAGAACGGTGAGGTGTTTGTG GGGGAGTAAGAGAGGGACAGAGACAAACAAAACAACACGCAGGACCCTCTTTTCGGATTCGCTTGTCTTTATTACTTCAGTTTTAAGAGTTGCGGACCACAGTCACCATGGTGAAAGTGTCTTTCAGCTCTGCGTTGACACAGAAAGAAGTGAAATGGGACGCGAAAAGTCTTCTTCCTGAGAACACAGATCCTGAAGCAGCCAAACCCGCTGTGGTTCCTGTTTCTCATCAGCAAAACCAAGCCTGGTGCTGGTGCATGTGTCTTGGTCTGGCCCTCATGTTGTCGGGTGTGGTGGTGGGCGGAGTTTATCTGTTCAGATACTATTCTGAGAACGGTGAGGTGTTTGTGTGTGGACTCCAATACCGTGAAGAAGACTATATGATCAGAGACGAAGAGGAGGAGGTGCACGTGGAGTTTTCCAGCTCTCACCACCTCTACCTGCTGGAGGAGAAGATCAGAATCCTGC 3 2 5' arm Cynoglossus_semilaevis mirnest 100 100 -28.5 .......(((((((.((((.((((..((((((.((((((((.....))))))))..)))))).)))).))))..)))).))).... (-28.5)