mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure TATGTGTGTATGTATGTCGAT CCGAAAATACAAGCACGGTACA GATCGACGGCCGAAAATACAAGCACGGTACAGACTCGTATGTATGTGTGTATGTATGTCGATGTGACC TAATGATCGACGGCCGAAAATACAAGCACGGTACAGACTCGTATGTATGTGTGTATGTATGTCGATGTGACCTTTCGATATTACTCGAGTAAGGCTTCGAGGTAAAGGCCTTAAAAAAAAACTATCCTGCCCCCTCGAATTTATTTTCATCCCCCCCTCCCTCGGACAGACGCCATTGGATCAGGAAAATTTCGGATCCGAAACTCGAAATATCTCTCGAATTCGTACAGACGTATATACATATATATATATATATATATATGTGTGTGTCTACAATTTGGAAGAAAGCGAGGAAAAGGTAATAAAAATTTATCGTATATAGGATGATATCGATGGCGACGACCAACCAACGAAAATATGGCCCGATGTACCGTCGTCGACAATGTAAACTCGAGTCCAACGTCCCCCGCCCTGCCGATCAATTTTGAAGGAACAATGTGCAATGTCGCCAGCGATCCAAAA 3 2 3' arm Apis_mellifera mirnest 100 100 -17.7 .....(((..(((..(((((.((((((((((........))))).))))).))))).))).))).... (-17.7)