mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GCTGCTGCTGCTGCTGCTGCT CTGCTGCGCCAGCGACCGGTAC CTTCTCGCCCTGCTGCTGCTGCTGCTGCTGCTGCTGAGACGGGGGCTGCTGCTGCGCCAGCGACCGGTACAAGGGCGA TGATTCCAGTGTGTCGATTATTAGTGTACTATAATTGGGGTACATGGGTGGTGGTGCAAGTAGAATGAGGGCAGGGCTGACCGCCGTGGTCGAGTCGCTACGTAGTTATATCACATCTTCATATTGTAAGTCGCGGCGAGCGGCGGCGGGATGGGGTGGGTTGACTAGTGAGACAAGTAGCCCTTATTATTACTTAATCTTATGCCACATTATCCTAATCCTAGAAGTGAGATGAACCATAACTTCGTTATTACACAACACTAATATTTAAGAAGTGAGCGACGAGTGACGTCCAAGTCTGATTGCTATGAAATGCACGCGGTAACAAAATAACGGTTTGTAACGTCACTGTCCCGATCCGGGATTGGTCCGTTGACGACACCGGTCCACGGTCGCACTTTTGGAACTGACGGTGCATCGGTGTCGGAGCGAGGAATGATCCGAAGAGGCGCCTGGCCGTAGCCGCCGCCTTCCGACTTCCGAGTTATTGTCGACTGTCGAGTCTAGGTCTCGTTAGGCCGCCGTCAAAGGCCGGAAGAACGCTACCCGTGGGGTCCTGGCCCGTCCTGATCCACGCTATCGACGAGCGCTCGTCCTTCTCGCCCTGCTGCTGCTGCTGCTGCTGCTGCTGAGACGGGGGCTGCTGCTGCGCCAGCGACCGGTACAAGGGCGAATTCACAAAACGGGGGTAGCTATCTCGATGCATCAATGTGTAAATCTGCAGCTGAGCGTCGTCGAACGTGTGCGGGGTCGGCTCCACCATGTTCCGGTTCACGATCTCGCGAACGCGGGCGTCCAAAGACACCCTCTTTAGGTGATAGAATCNAAATGTANTCTTCGTATATGATTCTTGCCTTCTCTTCAACAGCTTCGGGGATTGTTTTCNTTTTTTNAAATCTTCCCAANGCCCAGCCCAGAAANAANATATTTTTCCTTCCNAAGTATTCCNCACCCGTANGAAAATCTCTNAAAAAACTTTTCCGTCCNGGCGGGGGCTTTCC 5 1 5' arm Tribolium_castaneum mirnest 100 100 -32.4 ....(((((((((((.(((((.(((.((.((.(((........))).)).)).))).)))))..))))...))))))) (-32.4)