mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGTGATAGGAGACTTTTACCC GTGCAAGAACTCTTATCATTGA GAGTTATATTAAGTGATAGGAGACTTTTACCCAAATAGTAGTCCTCCTGATTTCTGTACGTCAGAACTTTGGTGCAAGAACTCTTATCATTGAATTTTTGT TTTTTTTTTTTTTTTTTTTTTTTCCCTTTTCAACAGTTTTATTCAGAAAAATATAAAAATATAATAATTGGACGGAATTATCACAACCTTAGTTATAATCTAAATACTCTTCGCGTTTCATGTGGCGGGCGAACGAAGTCGGGTCGTCGACGATGTTTTCCCAGATCTTGTAATACTGCTCGGGGGAGATGTGCTCCGAGATGTCGCGCTCCTTCAGGAAAGTTTTCCAAATCTGGTCGTCTTCTGTTGTTTTAGGGGGCGCCCTGTTCCCCAACTCGCCGTAATGGAACACCTGGAGCGTGTACAAGAGGTAGTAATACGTGTACATCTTGTCACCTTCAATCGACTGAAAAGCAACCGTATGGGGGCTGCAACACCTATGGGGGAAGACGCTCAACTTGTGTTTCTCCTCGGGGAAAAACACGTGGTGGAGATTATATGGGTGAAAAGTTGACAAACCATTGGAGTCCCTAGTATCCACTGGAGTTATATTAAGTGATAGGAGACTTTTACCCAAATAGTAGTCCTCCTGATTTCTGTACGTCAGAACTTTGGTGCAAGAACTCTTATCATTGAATTTTTGTTTAAAACTACGGACTGCCCCTTGACTCAGGACATACCCAGCCTGGCCCATATTGTACACAGTGCTCCAAAACTGCCCAGCGTGCCCCAAATAATGCTTATCAAGGGGCTCAAGCCCCCCCAGAAATAATCTCAAATTCCCCACCCAACACAAAAGTGTAGTCCGTAAACGAACCAAAACCCCCCCAAACGGTCCGGGTACTGTTTTTCAAAAGCCCGCACAGTGGAAACCCAGGACAATTCCCGTCGGGTTTCCCAATGCCTGGGCTTTTTTTGGGTTCCCTTGGCCATATTAGGAATTTGAAATTGGGTGCAAATGCCCCCCCCTGTTCCCCTGGAAGCCTTCCCATTTTTCCGGGCGTTTCCCNCGAAAATACCCCAAAAATGGGCATTTG 3 1 5' arm Tribolium_castaneum mirnest 100 100 -19.6 (((....(((.(((((((((((.(((.((((........(((....(((((........))))).)))..)))).)))..))))))))))).))).))).. (-19.6)