mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GGGCGCCTGTAATCCCAGCTA GCAGGGGTTGCAGTGAGCCA AAATGAGCCAGGCGTGGTGGCGGGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATCACTTGAACCCGAGAGGCAGGGGTTGCAGTGAGCCAAGATCACGCCATTGCACT GGTGGCTCACGCCTGTTTCCCAGCACTTTGGGAGGCCGAGGGGGGCGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCAGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAAATAAAAATGAGCCAGGCGTGGTGGCGGGCGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAAGAGAATCACTTGAACCCGAGAGGCAGGGGTTGCAGTGAGCCAAGATCACGCCATTGCACTCCAGCCTGGGGGACAAGAGCGAGACTTAGTCTGAAAGAAAAAAAAAAAATCAGGGATATAGTTCATATCCCACTTCTTTGTTTACACCAATGTCCCTGGATATCAGCCTGTAGCTAATGGACTTGGATTTCTGGTCTAAGTGGGCATCCTAGGGATGGGGTGGAACACTGAGCTTCTAAGCCTCAATGTAGTGTAGAAAGGTGCTGGGGCCTGTCTGGCAAGCCTTGTTGAAATGCTCTGTCATTCAGTATTGCCTTAATAAACTTCACCCACAACTG 5 1 5' arm Macaca_mulatta mirnest Metazoa_SRP 2e-36 hsa-mir-566 3e-20 -49.3 ......((..(((((((((((...(((.(((((((((.(((.((((((.((.(((..........))).))...)))))).))).)))))))))))).))))...)))))))...))... (-49.3)