mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure GGAGGCTGAGGCAGGAGAATG TCCTCACGCCTCAGCCTCCTG GGTGGCAGGCGCCCGTAGTCCTAGCTATTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGTGCCACTGCACTCCAGATTCAAGAGATCCTCACGCCTCAGCCTCCTGAGTAGCCAGGACTATAGGCACGTGGGGC GGCGCGGTGGCTCACGCCTGTAATCCCAACACATTGGGAGGCCGAGGCAGGTGAATCACAAGGTCAGGCGATCGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGGCAGGCGTGGTGGCAGGCGCCCGTAGTCCTAGCTATTCGGGAGGCTGAGGCAGGAGAATGGTGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATTGTGCCACTGCACTCCAGATTCAAGAGATCCTCACGCCTCAGCCTCCTGAGTAGCCAGGACTATAGGCACGTGGGGCCTGTGCCACCATGCCTGGATGATTTTGTGTAGAAAGGTCTATGTTGCCCAGGCTGCCCTCCATCAAGGCTCTTCTTAAACTAGTCCTTCCTATCTTTTCAGATCCATCTTCCAGATCTGTGGCATGCACCCTGAGTCTGAATCANGAGGTGAGGGGCCTGGGAATCTGTGCTTTTGGCAAGATCCCCAGGAGACCTTTATTGGCAGAAATTTTGGAAAACATTTCCATCCTGTTCATGGCCCATTCACAGACAATGGTAACTCTGACCCTCCTGGGGCAACTCACCATCTTACAGGCACATTTACCTACTCTCTCAACTTTTCCGCCAGGGCTCATGCCCCCTTCTCCAGCCTGGAAATGTATGTTCTCAATGCCTTTCCTTCCCAAGGCCTGGGCTCAAAAGGTCTTCCTTTTTGGAAAGCCTTTCCTTGGCTGGGCTTCTGTTTAAAAAATTTGGTCATGGGTCCCCCCCTGCCC 4 0 5' arm Macaca_mulatta mirnest Metazoa_SRP 2e-41 hsa-mir-1273 0.0000000000001 -80.3 ..........(((.((((((((.((((((((((((((((((((..(((.((....((((.(((((.(((...)))(((((((.((((....)).))))))))).))))).))))....)).)))..)))))))))))))))))))).)))))))).)))......... (-80.3)