mature_miRNA miRNA* pre-miRNA EST_contig mismatches bulges arm species source_database RFAM_best_hit RFAM_lowest_evalue miRBase_best_hit miRBase_lowest_evalue folding_energy secondary_structure AGTTCTTCAGTGGCAAGCTTT AGCTGCCAGTTGAAGAACTGT CTCTCACACCCTCACCTGGCTGAGCCGCAGTAGTTCTTCAGTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTCTGCCCCTGGCTTCGAGGAGGA TTGGCGCGGTGATTTGCTCCCCTCTGCGCAGCAACCCCCACACCCAGCACCAGGCCCCCAGAACTCTCCTTCCAGCTGAACTCCCTGGGAACAAGTCATTTGGGCTGATGACTGAACTCATATTTCTGGACCTGAGGAGCCTGTTCCTCTCACACCCTCACCTGGCTGAGCCGCAGTAGTTCTTCAGTGGCAAGCTTTATGTCCTGACCCAGCTAAAGCTGCCAGTTGAAGAACTGTTGCCCTCTGCCCCTGGCTTCGAGGAGGAGGAGGAGCTGCTTTCCCCATCATCTGGAAGGCTGGCCCAGACTCTCGATTCCTGGCCGCTTACCTGTGTCTGAGACCCTTAGGCCTCCTGTCTCAGTTTCTCCACCTGTGAGATGAGCAGCCAGACAGATGAGTGTACGTGAGGGAGTCAGAAGCCCACCTGGGCTCTCGCGCCGCTGTGGGTGGGAACACACACTTTTCACATAAGCTGTTGTCCCTCCCCCATCCCTGACACCATCACCCAGGAGCTGGGCGGGGTAATGGGAAGCTGGAGGAGGGGGTTAGAGTTAGACCAATGCAAGGAGCTAGGAGGAGCTCGCCTCTCCACGATGTCCCCCCATGCAAGGGTGGCCCAAGGCTTCCCCTGATATCCAAAGCAGGACAGCAGCCCCTTGGTGGGATTCTAACTGCCGCTGCCCTGTTTCTTTCCTCACTTTGCTTTCCAAGGTGGTGTGTGATCCCCAGCTCAGGCCTGTGCAGACAGGAAATTCTCCCCTGCAGCAAGCAGGGGAGGTGGGGTGTGGGAAGGGACCCCCTTCTGGATATCAGGCAGTGTAAACCTGCCCCTTCCAGCCCTGAACCCTTCTCACCCCAGCGGCTACAGGGAACTTGGCCGGTTCGAATTTGTGGGGAAGAAAAGGGGCAGGGAACTGTATCTTTATCCTCCCGCTTGG 0 2 5' arm Macaca_mulatta mirnest mir-22 1e-41 mmu-mir-22 6e-49 -41.3 .........((((.((.(((.(((..((((((((((((((((((((.((((((....(((...))).))))))))))).))))))))))))))).))).)))...))....)))).... (-41.3)