| mature miRNA: AAGATCCAATGTTGTTGGGTCC species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|52376564|gb|CV226791.1|CV226791 WS0165.B21_E21 PT-DX-A-7 Populus trichocarpa cDNA clone WS0165_E21 3', mRNA sequence AAGATCCAATGTTGTTGGGTCC EST sequence (targeted fragment marked with yellow): AGTCACCTCATTACGTCACAGCACCGCTTGATTTCCTCCACTGCGCCAGTGAGTTCATGGATGGACACCATCAAAGGTGTCTTCACTGGAAAAAAGGCAGAAACTGAAGACACCCCAGAGTCATTCACGTTACTCAGCTTTGCAGATGGGATGAAGAATGCGAGGAGGGTTGGATCGCTAAAGCAATTCGTCGTTGGTAGAAGCAGCGAAGCGACTTTTTCTAGTGCCTTTGAAAAGCAGGAAGCAATAATTCGATATCTAGGTGCACTTGATCCCACTGGAGAGAACCTCCAAACAAGTCAAAAACAAGAAGCAGCGAAGCACTGTAATTGCACAATAGCAGATGTTGAGATTACACTTTCTAAGTTTATATGGGCTAAAGAAGCACAGAATAAGTTGCAAAAATTAAAGGAAGAAGGGAAACCAATGCCGAAGACCATGGCTGAGGTCCAGAAGTTGATGGGATCGACACCATTGGATCTTGCTCGGTCTAATTTGGGTAAGAGTGGGCAGATCAGCAAAAATGCACCCTGTCCATGTGGTTCCAAGAAGAAATACAAACGGTGCTGTGGAAAGGATTGAGGAGAGTGGAAGGTCAAATGGAAGAGGTGCACTCAAAGCATGTGGCCGATATGGTCGGTCCTCGAAAGATTGGAGAAAAGATTTGCAGTCCCAAATTTTGATTCATTTTTTACTAGCTAGAGGAGTTCGCCTAGATTGAGCTCCTAATTTTGTTTGCCATTAGCGGTATGTTCTCCGGACGGGTTGTTAAGCCGAAATTGGCTGCTTGTAATTGCACCTTGAACGAGTCAGATTGCCATTGAATAAATAAAGAAGAGCAACTTTTAACCAAAAAAAAAAAAAAAAAA | |||||||||