| mature miRNA: AAGTCATCAAAATAAAAGTTG species: Sorghum bicolor database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|34440257|gb|CF427556.1|CF427556 PH1_16_C03.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor cDNA clone PH1_16_C03_A002 AAGTCATCAAAATAAAAGTTG EST sequence (targeted fragment marked with yellow): CCGGCGGGGGGACAGGCCGGATCATGTGGGGTGCCGCCGCTTCCCGCCGCGCCTCAATCAAAAAGCGTGTTTTTGAAAGGCTGCCCCCCAAACAAAAAGGAAGGCACCCCCCCCTCTGTGTGTGTTCACCCACCCCGTGTTGCCCCCCGGTTTTTGTTTTGATGATTGGTT | |||||||||
gi|31376556|gb|CD461454.1|CD461454 SA1_32_C11.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor cDNA clone SA1_32_C11_A00 AAGTCATCAAAATAAAAGTTG EST sequence (targeted fragment marked with yellow): CGCAGCAGTTGTATTATTAGATATTAATTATCTCCATCCCGGGTATCAGACAAGAAAAACAAGAAGCAACGACGCGGGCAACTCGACTCGTCAAAGTCGAGAGCCCATTCAACTTTTTTTTGGTGATTTTCGGACATCCATCAGATATCTCTTTTGTTCAACATCCTCCTCTCCTCCGTCATATTCAGTAACTTAGCTATGGAAATTGGTATCAGTGAGCAGTCTCGACAGGGTATCTCGGTATCTTGTGAAGAAATGCAGTTCCATCCTTCCATTCCCAAACCCTCTCAATGCGCGTGTTGTATGGTGTTGGGGTTGTTTCATTGTGAATTCAGTCGTAAATCTCAACGCTCAGAGCCCGTGCAACCATCTAGGCAGCGGCGGTGACAACGGGAGCGGGGGCAGCGTCCTTGGGCTTGTCCTCAGTCTCGGGCTCAGCGGGCTCCTCAATCTTGGGAGCCTCACCGGTCTTGTTCTCCTCGGCCTTGGCGTCAGTGGGCTCCTCCCGGACGGTCTCCTCCTTGTTCTCCTCGGCTCGCTTCTCAGCAGGCTTGGGGGACTTGCCGCGAATGGTGTTACGGAGCTTCGAGAAAGGAGACTCCTTCTTCTCTCCCTCAGCGGGG | |||||||||