| mature miRNA: AATCAGCCAAACACGGCAGA species: Chlamydomonas reinhardtii database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|23363324|gb|BU651144.1|BU651144 1112091F04.x1 C. reinhardtii CC-1690 (mt+), CC-1691 (mt-), Gamete (normalized), Lambda Zap II AATCAGCCAAACACGGCAGA EST sequence (targeted fragment marked with yellow): CTAGTCTCTCCGGAAGCTGGAGTATGAGATTCACCGGCTTGTGGTGAACCGTGACCCCAAGCACACAAACTTTCTGGAGTTCCGCAACTACAAGGTCGTGTATCGGCGATACGCGGGCCTGTTTTTCTCCATGTGCATTGACCAGTCGGACAATGAGCTGACCTGCCTTGAGGCGATCCACCTGTTCGTGGAGATCCTGGACCACTACTTCAGCAACGTGTGCGAGCTGGACCTGGTGTTCAACTTCCACAAGGTTTACCTCATCCTGGACGAGTTCATCTGCGGCGGGGAAATCCAGGAGACGGCCAAGAAGGTGATCCTTGAACGGCTTGCAGAGCTGGACAAGATTGACACGTGAGCAGAGCAGGCGTTGAAGGATGTGAGAGACGCACACGGAGGAGCAGGCGGCACGCAAGGAGGCAGGGGAGTATGAAAGGGATAGGATCGCGTGACGGGGTTGGGGATGGGGGCAAATGTGGCATGCGGAGGTAAAGGATAGCACGTGCAACTGGCACGTTCCAGCAGCGAAGGGTGTCTCTCCATACGCGTGTGCAACGGATTCGAGTTGATACTGAGAAATGTGGGTGATTACAAGGTATTTGCTGGCAAGATAACACAGCACAGTATGTGGTACGCCGCAGCAGTGAGGCGCATTGTGGCTAGGGGATTTCCTCTGTTTGGTTGATTGGCTGTGTTTGTGCTTGGCAGCAGGACGTGGCTGGACGCATGGCGGGCCGTGC | |||||||||
gi|14236235|gb|BG855051.1|BG855051 1024041F06.y1 C. reinhardtii CC-1690, normalized, Lambda Zap II Chlamydomonas reinhardtii cDN AATCAGCCAAACACGGCAGA EST sequence (targeted fragment marked with yellow): TTTGGGAATATCAAGAGAGCTGTAGAGCATGAGGTTCAGACACGGTATAGAGGCCATGAGAGGCGAGATGCAGACGAGCAGTAGCGAGGGAGAGGAGCTAGCGAGAGAGGAAGTAGCATGTTTAGCTCGAAGATGCAGGCCGTNAGACTGTTTCAATTGAATGCAGGGAAGGTAGACCATGCCCTGTGATGTAGGTTTCCCGATGAACTGGTGGTGATGCCGCCGCGTCCCACCTTCGCGCGATGTGGGATGCAGTTGCGGAGGTGGTGAGGTTTGGGCGGCAGGGATTGGTCTCTGTCGCTTTGGGGATAGTGGGGGACGGTTGGTGGGGNGNGTGGNTTNGTTGTTGTGTGGGGTTGTGTGGTGTTTTGTGTGTGTTTTGTTTTGTTTTTTGTTTGGTTTTGTGTTTTTTTTGTGTTGTTTTTGTTGGTTTGTGGGTGGTTTTTTGTGTTGTGTTTTTTGTGTGGTGGTGTGGTGGTGGGTTGTTTGTGGTGTGGGTTGTTGTTTGTTTTGTTTGGTTGGTTGGGTTGGTTGTGGTTGTGTTTGGTTTTGTTTTTTGTTTTTGGGTGTTGGTGTTGGGGGTGTGGTGTGTTTGTTTTTGTGTGTTGGGTTTTGTTTTGTGGTGTGTTTGTGTTGTTTGTTTTGTTGGTGGGNGTTGTGGTTATAAAA | |||||||||