| mature miRNA: AATGGTCCGGCCCAAGCCAG species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|52494835|gb|CV241860.1|CV241860 WS02513.B21_H05 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02513_H05 3', mRNA sequence AATGGTCCGGCCCAAGCCAG EST sequence (targeted fragment marked with yellow): AGGAGATATGGGAGGTTCTCGGAAAGTGTCAGCTTCAAGAGGCTGTACAGGAGAAAGAGCAGGGTCTAGATTCTTTAGTTGTGGAAGATGGATCGAATTGGAGCATGGGGCAGAGACAATTATTTTGCTTGGGCCGTACCATTTTGAGTAGGAGTAGGGTACTGGTGCTTGATGAAGCAACCGCATCAATTGATAATGCAACTGACTTGGTTTTGCAAAAGACTATTCGGACTGAATTTTCAGATTGCACTGTAATCACAGTAGCTCACAGGATACCAACAGTGATGGATTGCACAATGGTACTTTCCATTAGCGATGGAAAACTAGTCGAGTTCGACGAGCCGGAGAAGTTAATGAAGATGGAAGGTTCACTTTTTGGACAACTTGTGAAGGAGTACTGGTCTCATTTACACGCTGCAGAATCACATTGAAGCTAAATATTATTTATCGTGTATCCCACTTCTAATTTCACCCTACCTTTTCAGCAAGGAAAAGGATGCTAGGACCAGGTAGGAAGTATGATGTATGATATTGCAACAATATTACAGGGCTAGAGAGGAAAAATGGAGAAGAGGAATATCAGTTCCTATCCTTAGTTTTGCACCTGTATTCAAACATCAAGCTTGCTAATATCTACTGGGAAATTGACTTGTAACCAGGATGATGGATGCATGTAAATTAGTGGATGCAAATTATTTTAATAGCAATAATTTTTTTTGCCAAAAAAAAAAAAAAAAAA | |||||||||