| mature miRNA: ACACTCTCTCCATTTCTCTAC species: Physcomitrella patens database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|208391310|gb|DC938200.1|DC938200 DC938200 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten ACACTCTCTCCATTTCTCTAC EST sequence (targeted fragment marked with yellow): ATTAACGGATGCCGTGTTGCATAATTCTATTGCAAATCCGGAGATTTTAACCCTTTTGGATATTTCCTCCTCGGTGGCTTGGACTGTAGCCTCCTGATGGATATCTTGTTGTGGGGCGATTAGATTCAGCTCCAGCACACGCAATTTGGCAGGAGCTTGGGATGATGCGAAGGGTAGACCAAGGGGGAGAGAGACGGAGAGAGTGAAAAAGCTGGCATTTGTTGTTCAATGATCGGGCTGCTGGCAGAGGGTTGTAGAGCAATTGAGGTTTGGGGTTGTTGGGGTGAGGAGGGCTCCCTGAATCCATAGCCGGGTGGAGCATGACAGGGAGTGGTACAAACATGGCGTGCAGGGAGGCTTTTCATGCGGGCACTTGGTATACTGACGATGCTGAGGAGTTGACCCAGGAACTGGATCAGTGGCTTCGTTCATCAGGGCTACCCAAGCTCGCTAATGCTCGTGCCGTCATAGCTCCGCACGCTGGCTATCGATACTCGGGACATTGCGCAGCTTACGCTTTTGCTAATATTGATCCGCAACGTGTACAGCGGGTATTTCTTCTAGGGCCTTCTCATCATCACTTCACAAGGAAGTGCTGCTTGTCAAAAGTTTCCGTTTACAAGACCCCACTCGGAGACCTTCCAATCGACAATGAAGTTTACGAANAACTTCNAGCAAGCGGCAGGTTCGAGGATATGGACGTTAGTGTTGATGAACCGGAACACANCATGGANATGCATTTGCCT | |||||||||