| mature miRNA: ACCAAGGGAATCATCAACGGA species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|52494602|gb|CV241627.1|CV241627 WS02512.B21_M08 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02512_M08 3', mRNA sequence ACCAAGGGAATCATCAACGGA EST sequence (targeted fragment marked with yellow): AAGGAGTAGAGTGCTCAAACACTGCCAAACCAAGTTCTGAGGCAAATGGAGATCATAAAAGAAAACAATATGAATTAGCATCTGAAATACAACATCAAAATAAATCACCGAAAATGGTTCAAGATGGTCACCAATCATCACCGAATAGCAGTAAAGGCTCCTTCAAGCAGCCAAAGCGTGGCAAGCTGGACTGGAATGTTCTTAGACCAAAAAGTCAACACAATCAAAATAAAAGAGGGTGAGCATTAGTTGGTCATTCCCTTGGTAAAAATGAAATTTCTTGTCTCATTAATGTCAGGTTGAGCATTTGCTTCTGTAACTGGGTGTACTTCTTTTCTAGCCCTTCAGCTTTCTCTTTTAGCGAGTATTGACTTATACAAAATGAATTAAGAGATTGTGCAAACTTGTTGTCATGATTCATATCATTAATGGCCAGATTTTCTTATTGAGCCTTCCAAAAAAAAAAAAAAAAAA | |||||||||