| mature miRNA: ACCGGCATTGCTTGGCCGGT species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|163920080|gb|EG712022.1|EG712022 Os5MPREST3482 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-M4A12SA, mRNA ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): GAGATAGAGAGAGCTGTACTAACTGATGAACTGCTCTCATGCAAGCCAGATTACCATAAAGATTGGGTCATAAGCACTGTTGTTAGGTTATCAATGGGAAATAGTTTTCATGGACGTTATTGGCCGTGAATCCCAAGTGGTGTGGCTAATCTCTCCAAACTAATAAAAGTTCATGGTTTCTTTCATGTAGGGAAAGGAAAGGTGATTTCAGTTGCCTGACTGCTGCCAGAATCTGCGAAGCATCTACAAGCGACGCCGTCGTTCAGGCAGCCGGCACGGCAATGCCGGTTCCCCTTGCTCCATACCCAACCCCGCCTGTGCCATTTACACCTCCCAATGGGGCTCAAAGCCAGCTCGTGTGCTCTGGGTGCCGTAATCTGCTCATGTATCCAGCCGGAGCAACGTCGGTTTGCTGCGCAGTTTGCAGTACCGTGACTGCTGTGCCTGCTCCTGGAACCGAGATGGCGCAGTTAGTTTGCGGAGGATGCCACACTCTCCTGATGTATATACGCGGTGCGACGAGTGTGCAATGTTCTTGCTGTCACACTGTCAACCTGGCTATGGAAGCAAATCAAGTTGCGCATGTAAACTGCGGGAACTGCCGTATGCTGCTCATGTACCAGTATGGCGCAAGGTCTGTCAAATGCGCAGT | |||||||||
gi|66919312|gb|CX106160.1|CX106160 BI125E09 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): ACATGGACACAACAACACAATCTGCCACTGCTCTCTGATTGGAACCCTCTCTGCCACACACACAACGTCCCCAATCCACCTGACACCTGACTCCCTTCCGTACCACACCTATCCAACACAACTGACAACTGCACCGTTCACTGATCCTAGTTATGGTCTTGCTTGTGACTCTGTCTGCATCTCAGCACACATGGCAAGTGTGTTGCATGTGCATGCAGCAGTGCAGCTGGCCTCCCATTGGCTGGCAGCATGCAAGCAGTCAAGCAATGCCTGTGACTACTGTACTCTCCATCAGCATTTGTTGGTTGCTGTGACCACAATGTGCAGTCTTGCACTGGACTCATGGCACATGCCTGCCCACCATGTGTTGTGTGCCTCCGCTATGCACGCCAGCCGCCTGCCACATGCTCACGTGGGGCCAGCATGATATCACCAAGTTGGCCATCATTGCCATGCTCCGTCGGCTCATCTCCTCACGCAACGTGCATCCACAGTACTCAACTCTCTTGCCTGCGTCCGCATGAACACTGGCTCGTCCTGTCCCCCCTGCGTACCCTACACCATCTACGCTGCATTCCGCTGGCACACACCCTGTGCTCACCGACGGCGCTGCGCTGCCCACGATGTACCCCATACCGCCTGCATCGGCGCCCCGCGTGAACGCACACTGCCCTGTCCTGCATGCCTTGTCACCTGTGCGACCCTCCTCCGTTCATACCGTGCGCGTCCGCCGGAGTGCACGCCACCACCGCCGAGTGAGATACAGAAGAGGTAGTCACACATCAAAACTACACATACGGCGCGCGCTCGATCTCTTATGACTGCTGAAGTGTCGCTATACGCTGGTCCTTACTCGCTTGAACTTCAACATATGAGCCTTGACAGCAACCACAGTACACGCTTGAGCGTCATCCATCTAGGAGCATCACATCCCCCCCTCGCCCGCCCCACCTACTGTTCCGTCGAGCTCTCCTTATGTCTCTACAACTGCCTGACTGCAGTACTCACCTCGACTCCACTCGCCAAAGCCGTCTCTCCCTCAGTGATGTGGCTGGCTGTCAGTCGCTCTCTGTGCGAGCCCACAACTTGGCTTGTGCACCCTTCGCAGCTCCGCCCCGCAAGCGGCTGCGCTCCGCTAGCGACATCACCTGTGTCTGCGTCACTCTTGAGGCGTCGCCCACTCCGACTGCTACGCTGTCGTGATTTGGCACGTAGTACCGCATGCCTGCCCTGTCTTCCTGTCCTTGATGTACATGCTGACTGCGCACGCTCGCGGCGCCACGGTCCGTGCGGTTCTCCTCAGCGTCCCCCTCGTCTCACGTGTCCACGCGACTAGGTCTCACCACCGTCTCACCGCACATCCGCCCGCGCCCCC | |||||||||
gi|58612567|gb|CK040279.1|CK040279 35813rsiceg_4880.y1 Oryza sativa cv. 93-11 tillering whole plant cDNA library Oryza sativa cD ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): ACTAGTGGATCCCCGGGCTGCAGGTAGGGTCTCTTCTACAGCGATTCTTCCCCTCCCACCGTCCAAGCAGTGCCGGCGAGATGTCCTCCCCCGACGAGGACCCGCCGACGGAGCCCGAGCGGTGGAGTGGATCTGGACATGCTCCTCTCCCGCCCCGGCAACCTCGTCCACGCCGACTTCAACCCCAGCCCCGGGCTGCGGGACTCGCTGGGGAGCCTCGTGGAGGTGCTGGTGGTGGGCGCGGGCGGGCTGGGGTGCGAGCTCCTCAAGGACCTGGCGCTCTCCGGATTCAAGAACATCCACGTCATCGACATGGACACCATCGACGTCTCCAACCTCAACCGCCAGTTCCTCTTCAGGGTTCAAGATGTTGGGAAGTCCAAGGCTGAAGTTGCTGCAAAGAGGGTTATGGAGCGAGTTAGTGGAGTGAACATTGTTCCACATTTCTGTAGGATTGAAGATAAAGAGATAGAGTTCTACAGTCAATTCTCGATAATTGTTCTTGGTCTAGATTCAATTGAAGCTCGAAGCTATATCAATTCCGTGGCGTGTG | |||||||||
gi|58653478|gb|CK042158.1|CK042158 42904siceh_0573.z1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gro ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): TTAATGTAACGTGCCCCCAGTCTCCTGTCTGGGATCGGTCAGACCGGCCACGCAATGCCGGTCAGACCGCCCTGTGTGCCTGGTCAGACCGGCCATGCAGAGCCGGTCAGACCGCGGGTACCACCGGTCAGACCGGCCGTGCAATGCCGGTCAGACCACCCCTGGTCTATGACTTTGCCAATTTCGTCCAAACTTTTGAAATCAAGCATCGGCCTTTAGTATATGATTTTTTTTTACATAATAGCCAGATGCTTGGTATATCAAATTATTAGACCAAAATTCCTTCTCTCTAGACATATGAAAAATTATAACATTCAACTAATATGTCTAGATGAATACTAATTCAATTGGCTTTTGAAACAATAATTATCATGACATCCAAACACTTAGCCAGTTGAAGCATAATCAATAATGAATCACCAAAGTCATATATGTCACATGTATAGATTTCAATAAACTACAAATGTAAGTAATCGGCTCGGCTTGAGCATGCATGCAAAATATTAACAATGCCAATGTTCGTAAAGGAAACAACTCTAGATCAAATCATCACATTGACCATTGACATTA | |||||||||
gi|29669846|gb|CB666121.1|CB666121 OSJNEd12O02.f OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd12O02 5', mRNA sequence ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): GTGATTTCAGTTGCCTGACTGTTGCTGGAATCTGTGAAGCATCTACAAGCGATGCCATCGGATCAGGCAGCTGGCACAGCAATGCCGGTTCCCCTTGCCCCATATCCAACTCCTGTGCCATTTACACCTCCCAATGGTATGGATTCCAACTTGGCACTGCAAGAACACAGCTACATTTTGAGTTTTTTTTCCCTGATGTTGGTTGGTCACCTAGAAATGTTGGTACATGCCATAGTGTTCGCCCTGATGCATTCTTTTGGACTAGAAATCTTATGAACTGAATTTCAATAGACAGCTTTTTCTTGAATCAGATGTTACTGTTCCTGGTTCAGAGGTTGCAGTTTATTCTGCTCATACAAATCCTGAAAGTTTAGAGAGAACTCCTTGTTGAGAAAATGGAAGCTTTTTTACTGCTGAGTTTCGTTGTCTGAAATGAAAATGATGCATGGAAGATGCTTTTGTTGACTGAAAATGAAAATGTTAGCTGCTGAAATGCGACATTCAGTCAGTCTCTGAATTTCAGGGGCCCAAAGCCAGCTCGTTTGCTCTGGGTGCCGCAATCTGCTCATGTATCCAGCCGGAGCAACGTCGATTTGCTGCGCAGTCTGCAGTACCGTGACCGAGGTGCCTGCCCCCGAAATCTAGCTGCTATGATCACGAAAATAAAGAGAGATTAAAGGGGAATACAAATGGCTGCAGGGCTCCGCAACAGTGCACGTGTCGCGTTGATGGAGTGCCTGCACTCACGTCGCTCGAGAAGAAGT | |||||||||
gi|33691535|gb|CF319774.1|CF319774 HD--10-G13.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA library (HD) Oryza sativa J ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): AATAAATTTGCCAAGCTCTATCTCACACTGTAAGAGAGAGGAGATAGAGAGAGCTGTACTAACTGATGAACTGCCCTCATGCAAGCCAGATTACCATAAAGATTGGGTCATAAGCACTGTTGTTAGGGTTTCTTTCATGTAGGGAAAGGAAAGGTGATTTCAGTTGCCTGACTGCTGCCAGAATCTGCGAAGCATCTACAAGCGAACGCCGTCGTTCAGGCAGCCGGCACGGCAATGCCGGTTCCCCTTG | |||||||||
gi|218485614|gb|FG965779.1|FG965779 MA_LYP9_04563 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): CCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAATTCGTTTGCTACTACAATTGTTGGGGTAAATGAACTTCTATATTTTGTTTGATAGAAAAGAGTTTCTGGCTCCCCTAATACCCTTTTTAGGGGTGCATCTCGGTGCTGCCACCATTATCCTCACGCGTCGCCGGTTGTCTGCCTCTATCCTCGCGCGAGCGGATCCATTGCTGCCGTGGATCAGGAAGCCATGGCCTCGTTGATGGTGGGCATCGGCAACGGCACCACCTCCACGCCCATAAGGAGCGAGAGTGTCACGATGGTGCAGAGCATATCCCAGATTGGCCGTATGGCGAGCAAATGGATAGATGGGTTTCTTTCATGTAGGGAAAGGAAATGTGATTTCAGTTACCTGATTGCTGCCGCAATCTGCGAAGCATCTACAAGCGACGCCATCGGTTCAGGCAGCTGGCACGGCAATGCCGGTTCCCCTTGCCTCCATATCCAACTCCTCTTGTGCCATTTACAGCTCCCAATGGGGCCCAAAGCCAGCTCGTCTGCTTTGGGTGCCGTCCAGCCAGAGCAACGTCGGTTTGCTGCGCGGTTTGCAGTACCGTGACCGCTGTGCCTGCTCCCGAGCAGA | |||||||||
gi|66914096|gb|CX100944.1|CX100944 RECm1870 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): TTTTATGTTCCAATCAAATTATGTAAGAATCATATTCCTTTATTCTTTCATATTGGTGAAGCCGTACCGTGTCAGTATAGGCTGATTTGTTTACATTAAAGCAAAAAAAAATGTCTATGTTCACAAGGTAGAGGGTGATTCATGTGTCCTTTTACTCTTCAGTAACACCGGTCAACCGATGATAGACTCTGAAGCGTACAAGGCTTTGATATCCTCCACGTCATCATAGCTCCCCAGGAATATTGGAGATCTATCATGAATCTTTCTGGGAACAAGTTCAAGGGCCCGTTGTTTGCCTGTGAAAGCTTGTCCTCCAGCTTGCTCCATCAAGAATGACATTGGGAACACTTCGTACAGAACACGAAGTTTTCCGTTGGGGCTCTTCTGATCCGCAGGGTACAAAAATATGCCTCCATATAGCAAAGTACGGTGGACATCAGCAACCATACTTCCGATGTATCTCAAGGATTTAGAAGGCGAACCATCCTGGGGAAATTTACATTTCTCCACAAACTTCGCTGTAGGAGCATCCCAATTTTTCGCATCCCTTCGTCACTGAATAGATCTTCCTCTATTTGGTATCTTGATGTTCGGATGAGTCAAATGAACTCCCAAGGGAAGGTCACGGTGAACCGTTATCCATTCAGTGTCACCACGGTGCTACTCCCGACAGCGACCAGAGAGCTGTGGCCACTGCGGACCGCCAGGCAATGCCGCTTAACATGAACCAAACTCGGGGACCCCAATGAGCCCGGAAAAACGAATCGGGGAGGGAGAGCCGCCCAACAAAGCGCAAAAAACAACAACATACAACAGAACAACGCACACCCACCGCGCCGGGGGAA | |||||||||
gi|58693225|gb|CK081912.1|CK081912 85372rsicen_27484.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indi ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): GAAGAGCTGAGGCATACTCCGAACCCAGCCAGAGAGCTAGCTCAGTGAGCAGTACACAGTACACTCCCCGGGTTATCTCTCCCAGCACGCCAGCTAGCTTTTGCTTGCAATGGCGGACTGCATGCAGGAGTGGCCGGAGCCCGTGGTCCGCGTGCAGGCGCTCGCCGATAGCGGCCTGGAGGCCATCCCGCGCTGCTACGTCAAACCACCGTGCGACCGCCCCGCCCCCGAGGCGGACGACGCGTCCTCCGGCGCCAGCATTCCGGTGGTCGACCTCGGCAACGGCGGCGACGACGAGGGCGGCCAGCTCGCGGAGGCCGTGGCGGCGGCGTGCCGGGGCTGGGGCTTCTTCCAGGTGGTAAACCACGGGGTGCGGCCGGAGCTGATGCGCGCGGCGCGGGAGGCGTGGCACGGCTTCTTCCGCCTGCCGCTCCAGGAGAAGCAGAAGTACGCCAACTCGCCGCGGACGTACGAGGGGTACGGCAGCCGGCTCGGCGTCGAGAAGGGCGCCATCCTCGACTGGGGAGACTACTACTTCCTCGTCCTCTCGCCGGACGCCGCCAAGAGCCCGGCCAAATACTGGCCGGGCAATCCCGGCATCTGCAAGGAGGTGTCCGAGGAG | |||||||||
gi|44678570|gb|CR292004.1|CR292004 CR292004 Oryza sativa library (Han B) Oryza sativa cDNA clone p728e02p5, mRNA sequence ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): AGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATTGTAAACAACACCCTGTGCCCTCCGGTGCCCGAGTCATGCGACCTCGGTGGAGGTCACTGATTGAGCAATGCTGGTCGTCGGAACCGTCAGAAAGAGCGAGCTTCACGGATGTTGGCAAGAGGCTACGGGCCATGGCAAACCCCTCTAACAAGGCGCAACCTCAGAAATAAAATTTTTTTTTTTGCCCCTCAAGCTCCTGTTCTGCGGCCTGTCTCCTGTACAAAATCTTGTGAAGGGAGCCATGGCTTGCTCTGTACTAGTCTGTACATGAATAAGGGGAAAACTAAATAAACCAATACAAAAACAGAAACACATGTTCGGACGGCCTCGGGCCATGTGAAATCTTAGACTCGAAGGCAAGCCTAATGCCATTCGGACTGCAATTCGAGTCTCAATTGGGCCAAATTCGTCCCAATAAGTGGAGTCCGTATTACCAAATTCCACATTGGCGATCGTTTTACAAATGATCTGGACTGGTGAAAACCCTTGTGTTATGCAAGTTAATCGGCGTATAAGGAGATTCGCCATTATGCGAGTTTGGGTAAAAATGAAGAAAGGGGTAGAAAGTGATTTGGGTTTACAAAAGGTTTGACAGGCCTGTAATTGGGAAAGTGGACTTTAGTAGAGGTTAAAATATGGTGTAAAATCGGTAAAATATGGT | |||||||||
gi|38469810|gb|CF953941.1|CF953941 2727rsiceb_9003.y1 Oryza sativa cv. PA64s leaf cDNA library Oryza sativa Indica Group cDNA 5' ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): ACGGCACGAGGGCCTCCTATCATATGAGCTCCTCCTTTTTTCTTCTCCCCTATAATTGCCAAGCTCTATCTCACACTGTAAGAGAGAGGAGATAGAGAGAGCTGTACTAACTGATGAACTGCTCTCATGCAAGCCAGATTACCATAAAGATTGGGTCATAAGCACTGTTGTTAGGTTATCAATGGGAAATAGTTTTCATGGACGTTATTGGCCGTGAATCCCAAGTGGTGTGGCTAATCTCTCCAAACTAATAAAAGTTCATAATCTGAACACAAGATTTGATGAGAGATTCAACCAAGAAGCTGAAATTTTTTGCACCTGATGTGCATAGCTGAACCAATTTTCTGTTGCATAAAGAGTCCTGAAACTTCATGTTGCAAACTGAAGCGGTTTCTTTCATGTAGGGAAAGGAAAGGTGATTTCAGTTGCCTGACTGCTGCCAGAATCTGCGAAGCATCTACNAGCGACGCCGTCGTTCAGGCAGCCGGCACGGCAATGCCGGTTCCCCTTGCTCCATACCCAACCCCGCCTGTGCCATTTACACCTCCCAATGGGGCTCAAAGCCAGCTCGTGTGCTCTGGGTGCCGTAATCTGCTCATGTA | |||||||||
gi|88223066|gb|CI222915.1|CI222915 CI222915 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): ACTGCCAAACACTACCTTTATAACTTGACTTCAATTTATCTGTAAAATAGCGTCGTCCAGTTCATACACACTGGCCTAAATAACCAAAAGACCTTAAAACATTCAGCGCCACACGCCCAACGATCCAAAAACTGACACGGGCCGTGCAATGCCGCTAAGCCGTTTCATCATTTCCTAACAAGACACCCCAATGCTAAGCTAAGCTGATTGGCTTCTCTACCTACATAAAAGGCTTTCCCTCCTCCTCTACACGCCCCCCCCCCTCCTACCACTACCACTACCACCATGGCCACTGCCCTCTACTCCAAGTCGCCGTCGTCATCGTCGTCGTCCTGGAAGAGGCGCCTGCGCTTCGACGCCAGCTGAGACACCTGCGCGTCCATGGCCGACCTCTTCTCCTCCATGGTGGCCGCCTCCTCCTTCATGTCGTGCATGACCAGGCCTCGGTTCCTGCAGAGCTTCCTGATCGCCGTGCTGTGTGCAGGGGCTGCAGGCGTCTCGGTCTCAGGACCTTCATTCGCTCCTCCGGTGGTGGTGGTGGTGGTGG | |||||||||
gi|58653478|gb|CK042158.1|CK042158 42904siceh_0573.z1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gro ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): TTAATGTAACGTGCCCCCAGTCTCCTGTCTGGGATCGGTCAGACCGGCCACGCAATGCCGGTCAGACCGCCCTGTGTGCCTGGTCAGACCGGCCATGCAGAGCCGGTCAGACCGCGGGTACCACCGGTCAGACCGGCCGTGCAATGCCGGTCAGACCACCCCTGGTCTATGACTTTGCCAATTTCGTCCAAACTTTTGAAATCAAGCATCGGCCTTTAGTATATGATTTTTTTTTACATAATAGCCAGATGCTTGGTATATCAAATTATTAGACCAAAATTCCTTCTCTCTAGACATATGAAAAATTATAACATTCAACTAATATGTCTAGATGAATACTAATTCAATTGGCTTTTGAAACAATAATTATCATGACATCCAAACACTTAGCCAGTTGAAGCATAATCAATAATGAATCACCAAAGTCATATATGTCACATGTATAGATTTCAATAAACTACAAATGTAAGTAATCGGCTCGGCTTGAGCATGCATGCAAAATATTAACAATGCCAATGTTCGTAAAGGAAACAACTCTAGATCAAATCATCACATTGACCATTGACATTA | |||||||||
gi|58692566|gb|CK081253.1|CK081253 80221rsicen_4837.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indic ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): CCCTCCTCATCCTCTCCCTCACGCAGCTACAAGATTGGAATCACTCCGGTTAACGAGAAAGGCGTCCAGCCAACCACTTCTCCTCGGTGACTATTTTTCTCTTCCCTCCAGCCCTGGCAGCAATAGAGCAAGCTCATGTCACCGTAGTCGCATGCTCTTGGGGGAGGAGATACTAGCAGCCGGCCTAAGGAAATCTTCAATTCTTCATCGCCGTCGCTTCCTCAAGTTCAAGAACTGGTGTAATAGTTGATAGAGCTATACTTGCAGAAGATAAAAAACATGGTGGCTTCAAGAGCTCCAAGGAGTGAATCTCCATGGCTAAAGAAGCCCATGCATGGAGTTTCAGGCTCAACTGCCATGGCTAGCACCCCATGGAGCTCGATGCCACCAAGCAGCCATTCCCTGGGTTTCTTTCCTGTAGGGAAAGGAAAGGTGATTTCAGTTGCCTGACTGTTGCTGGAATCTGTGAAGCATCTACAAGCGATGCCATCGGTTCAGGCAGCTGGCACAGCAATGCTGGT | |||||||||
gi|58596435|gb|CK006963.1|CK006963 32051rsicef_14140.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): ACGAGGTCCATTCCTTCTTTCGCGCGCGCGCGCGCACGGCCGCCGCCGGCCGCCGTCAATCTCGGGCAGCGTGTGGACTCCGACGGCTGTGGCCTCCTCTGCTCATGCTCATGCTCATTCTCATTCTCCATTGATGGGTTTCTTTCATGTAGGGAAAGGAAAGGTGATTTCAGTTGCCTGACTGCTGCCAGAATCTGCGAAGCATCTACAGGCGACGCCGTCGTTCAGGCAGCCGGCACGGCAATGCCGGTTCCCCTTGCTCCATACCCAACCCCGCCTGTGCCATTTACACCTCCCAATGGGGCTCAAAGCCAGCTCGTGTGCTCTGGGTGCCGTAATCTGCTCATGTATCCAGCCGGAGCAACGTCGGTTTGCTGCGCAGTTTGCAGTACCGTGACTGCTGTGCCTGCTCCTGGAACCGAGATGGCGCAGTTAGTTTGCGGAGGATGCCACACTCTCCTGATGTATATACGCGGCGCGACGAGTGTGCAATGTTCTTGCTGTCACACTGTCAACCTGGCTATGGAAGCAAATCAAGTTGCGCATGTAAACTGCGGG | |||||||||
gi|88832891|gb|CI369781.1|CI369781 CI369781 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): CTGGCCTGCATAACAACTTCAATTTATTCATAATTCAAGAAGAAAGGGGAGCACAGATTGCGATAGATAAAACTACACCATATCTTCTACATGTCTTGACAGATCACGCAATGCCGGTGTGAAGGGAGCTTCCATCGTCGCGGCGTGAGCTGGTCAGAAGTCGGAGCAGCGGCCGCCGCGCTCCCAGTCGCCGTACCGCGTCGGCTCGGGCCCGCGCGGGCCGCCGATCTCGCCGGTGTCCTTGTTCACGTACTCACCGCCGCCGCCGCCGCCGTCTTCCCCTTCCTTCCTCGCGTTAACAGGGTCG | |||||||||
gi|88233037|gb|CI232886.1|CI232886 CI232886 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): TTTTTTTTACACCAACTCCATTGGGATGCAAATTAATCATAATGAAGTGATTAACAATCAATCAATCCAAAAATTAGCCAATCCATGCATGCAAACCAATCCTTACTGTACCACTCCAACCATCAGTATCCTCAATCACCATCCGATCGATGCCGCGATCACACCGACGCGGCGGCGGGGCGGGCAATGCCGGTGTGCGTGACGAGCGCCCAGAGCACGGTGACGAACTCGCCGCCGCGCGCCAGCGCCTCGCCGTGCGCCCTCACCTGCTCGGCGTCCCTCGCCGGCGCCACGTACACGACGATCTCCGTCCACACGTCGGCCACCAGCTTCCACACCGCCGCCTCGTCGCCGCCGGCCGCCTCGTCCATCAGCGCCTTCCCCAGCCTCGCCCCCTTGCGCACCACCGTCGTCTCCTCCGCCGCCGCCTCGTCGTCTTCTTGGCCGCCGGCGATAGCCATCATCTTCCCGTACCGGGTGGCGTCCGTCGAGAAGTAGTAGCCCTTGAGGCCCAGCTCCCGCTTGAGCTCC | |||||||||
gi|29673239|gb|CB669514.1|CB669514 OSJNEe02B06.r OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe02B06 3', mRNA sequence ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): TGCCACCAAGCAGCCATTCCCTGGATCCCCACGAGCTCACAAGTTAGTGAACTTATTTCCAACTGTGGTTCAGCTCTCCATGAATTGGCAGCTGTGCTTGCTAGCTCTTCCTGTCCCCTTCCTAGCAGAACAGATGGCGGTGCTGTACGTCACCTTCTTGAGGTTGATTGACTAAAAACCTTGAAAATACTCCCTCCGTTTCACAATATAAGTCATTCTAGCATTTCCCATATTCATATTGATGTTAATGAATCTATACATATATATATATCTAGATTCATTAACATCAATATGAATATGAAAAATGCTAGAATGACTTACATTATGAAACGGAGGAAGTAGTTGGCAAGGGAGGTGGATGTGGGGAGGGGTTGAGTTGCTCTATGTGCTCACTGGTTGAAGCTGATTGTTGCGCTCCTATCTACCTCACTTATTTACCAGGAGGTGTTAAGCTCATTCGGTTTCTTTCCTGTAGGGAAAGGAAAGGTGATTTCAGTTGCCTGACTGTTGCTGGAATCTGTGAAGCATCTACAAGCGATGCCATCGGTTCAGGCAGCTGGCACAGCAATGCCGGTTCCCCTTGCCCCATATCCAACTCCTGTGCCATTTACACCTCCCAATGGGGCCCAAAGCCAGCTCGTTTGCTCTGGGTGCCGTAATCTGCTCATGTATCCAGCCGGAGCAACGTCGATTTGCTGCGCAGTCTGCAGTACCGTGACCGTGGTGCCTGCCCCCGAAATCTAGCTGCAATGTTCACGAAAATAAAGAGAGATTAAAGGGGAATACAAATGGCTTCAGGGCTCCGCAACAGTGCGCGTGTCGCGTTGATGGTG | |||||||||
gi|88346700|gb|CI657251.1|CI657251 CI657251 Oryza sativa (japonica cultivar-group) 4th leaf leaf 3mM SA(salicylic acid) for 1 da ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): TGATGAACTGCTCTCATGCAAGCCAGATTACCATAAAGATTGGGTCATAAGCACTGTTGTTAGGGTTTCTTTCATGTAGGGAAAGGAAAGGTGATTTCAGTTGCCTGACTGCTGCCAGAATCTGCGAAGCATCTACAAGCGAAGCCGTCGTTCAGGCAGCCGGCACGGCAATGCCGGTTCCCCTTGCTCCATACCCAACCCCGCCTGTGCCATTTACACCTCCCAATGGGGCTCAAAGCCAGCTCGTGTGCTCTGGGTGCCGTAATCTGCTCATGTATCCAGCCGGAGCAACGTCGGTTTGCTGCGCAGTTTGCAGTACCGTGACTGCTGTGCCTGCTCCTGGAACCGAGATGGCGCAGTTAGTTTGCGGAGGATGCCACACTCTCCTGAT | |||||||||
gi|87011178|gb|CI287855.1|CI287855 CI287855 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): AAACACGGTGCAAAGTGTGCAGCGAACTCGATAAACATTAAACAAGCTGTGTGAACTTCTTTTTTCGTGACAAGTTTAATTCTTTCTCGATCGATCGTCGTGATGGCTGACGAGTACGGCCGCGGCGGCTACGGCAGGTCCGGCGCCGGCGCCGGCGACGACTACGAGAGCGGCGGCTACAACAGGTCCAGCTCCGGCGGCGCCGACGAGTACGGCCGCCGGCCGGGCAGGCGGTGCCGGTGGCTACAACAAGCCCGGTGGCACCGACGACTACGACAGCGGCTACAACAAGT | |||||||||
gi|58656951|gb|CK045631.1|CK045631 51773rsiceh_25105.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): CGGGCTGCAGGAATCGGCACGAGGTCTCTCTCTCTCAATCTCATCTCCAGCCGCGCTTTCTCTCTCTCTAGCTCCCAGCCTCGACTTCACCCAAACCCTAGCCCTATTGCGCGCGGGAGACCCGCCGGCGAGGCGCGCGCACGGAGCGAGCCGGGGGGCGGGAGGGCCAGCCGCCGCCGCCGCCGCCTGCAGCAGCGAGGATGCCGTCGGGGTCGGCGACGCAGTGCCGGTACACGCAGACGCCGTCCAAGGTGCTCCACCTCCGGAACATGCCGTGGGAGTGCACCGAGGAGGAGCTCGTCGAGCTCTGCAAGCCCTTCGGCAGGGTCGTCAACACCATGTGCAACGTCGGCGCCAACCGCAACCAGGCCTTCGTCGAGTTCGCAGATCAAAACCAGGCAATTTCAATGGTTTCATATTATGCTTCTTCTTCAGAACCTGCTCAAGTTCGTGGCAAAACTGTATATATCCAGTACTCAAACAGACAAGAAATTACCAACAATAAAGGAACTGGTGATTCCTCTGGCAATGTTCTTCTTGTCACTTTAGAAGGTGTCCAGCCTAATGATATTAGCATAGATGT | |||||||||
gi|29657773|gb|CB654048.1|CB654048 OSJNEc05K06.r OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc05K06 3', mRNA sequence ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): AGCAGCCATTCCCTGGGTTTCTTTCCTGTAGAGAAAGGAAAGGTGATTTCAGTTGCCTGACTGTTGCTGGAATCTGTGAAGCATCTACAAGCGATACCATCGGTTCAGGCAGCTGGCACAGCAATGCTGGTTCCCCTTGCCCCATATCCAACTCCTGTGCCATTTACACCTCCCAATGGGGCCCAAAGCCAGCTCGTCTGCTCTGGGTGCCGTAACCTGCTCATGTATCCAGCCGGAGCAACGTCGATTTGCTGCGCAGTCTGCGGTACCGTGACCGCGGTGCCTGCCCCCGAGCAGAAATCTAGCTGCAATGTTCACGAAAATAAAGAGAGATTAAAGGGGAATACAAATGGCTTCAGGGCTCCGCAACGGTGCGCGCGTCGCGTTGATGGTGCCTGCACTCAGGTCGCTCGAGAAGTACACACTGAAGTTGCTCTGGTCATATTTACATTGTTGTGTGTAACTCTTCCTGGTTTGCTTTTCAGTCTAGGATAGAGATTTACATGTCAAAGAGTCAGTGCACTTTTGAAAGTGTAATGCGATGCAAGTAAAAACAGTTTTGGACAAGATCGAAAGGATCCATGTCATTTGCTGTCAGAATAGTAATGTTTGTTACTTAATGAGGTTTGTTACAAACCTTAATTACAGGAATAGCATTGTAGTAGTTCTTAACTTTTTACACTCCTATTTGTAGATGTACAATTATCAGATGGACTATTTTATACACTACTTTCTCCCTCTCTATATAGCATTTACATTTATTTATGTATAATTATCAGATGGATGATGAGTTGATGACAATACCTTCTATTTATGCTGTCCTTTCTCT | |||||||||
gi|117236721|gb|CT855592.1|CT855592 CT855592 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): AACATCCGAATAGACAACGAATCCACTCTCAGCGACCACAAACCCAATCCCAAGAACCCGTTCGATCGATGGCTGCTTCCGACGTGCACCACGGCGGCGCCACGCCGGCGGCCGCGGCGACCGCCGTGCCGTGCGTCACGCTCAACTCGGGCCACGCGATGCCGGTGCTGGGCTTCGGCACCGGCTCGTCGACCCCGCCGGCCGACCTGGCGGCGACCATCGCGCACGCCGTGCGCCTCGGCTATCGCCACCTCGACACCGCGGCGGTGTACGGCACCGAGGGCGCGGTCGGCGCCGCCGTCGCCGAGGCAGTGCGCTGCGGCGCCGTGGCGTCCCGCGGCGAGCTGTTCGTCACCACCAAGCTCTCCATGGCCGACGCGCACCCGCCGCGCGTGGTCGCCGCGCTCCGGGAGTCGCTGTCCCGGCTCGGCCTCGACTACGTCGACCTCTTCCTCATCCACTGGCCCGTCGCCATCGGCAAGAAGGACGCCGCCGGCGAGCTGACGTGGGACGACCTGAGCCGCGGCCTGGTGCCGTTCGACATGGAGGGCGTGTGGCGCGGCATGGAGGAGTGCCACCGGCTGGGCCTCGCGAGGTCCATCGGCGTCAGCAACTTCTCCGCCGCCAAGATGTCGCGGCTGCTCGCGCTCGCCGCCGTGCCGCCGGCGGTGAACCAGGTGGAGATGAACGTCGGGTGGCGGCAGGAGAAGGTGCGGGAGGTGTGTGGGCGAGGAGCGCGGTCTTTCCCCCCACCCTTAAGTTCAAGGTTTTGCCGACCCTCAAAAGAGGGGGAAACCACGAGTCTCTCGCCTCCCCCCTAGTTCTATAAAATTAAGGAATCACAAAAATTATTTTTTTTTCCGCGAAATTTTCCATCTTTTAAATGTAAAAAATTTCTGGATTTTCTTGTTCCCTCCGGGTGTAGGGGCCACACATTAGCGGCCGCAATTTCTTTAATAAAAGAGAAAAAATTGCGCCCCATCCTTCCGCGGGCCGTCTTATTTCTCTTAACTTTTCTATTAACGGCATTGATCGTACCCCTCCGCTTTGATTGTCTCCTTTATCTCAACATACAACACCATAATTGTCTCTTATTGATATCTATGTCTCCGTATATTTCTCTGAAAAAACAATCGTCCCGCCCTCCTCCGACAAAAGAATATAATAACATCATTGCTTCACTGGCCCTATTACTAATCACTGGCTGTGATGACATAAATAACGACGCTCAAATTGATTGCTCCTCTTACGACCCTTTATGCTCATATACCTCTATCTTATTCCTCTCCCCATCTGCTACGCTCGCCGCGCGCCGGCCTCAATCTCTTTGTCTATC | |||||||||
gi|87007265|gb|CI277340.1|CI277340 CI277340 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTCCACATGAGATGGAAATTAAACCGAACAAGACATGGCCGGGAAGAGCAATGTCGTCCAAACCACAGGGCACACGTAGACGTAAGCATCCGAGTACACCGCATTAATTACTTGGTGTTCGCGCCAATGCGCGCAATGCAAGCGAGCTCCGCTATGCCGGCGCCGCCGGCTGGTCGATTTCGCCGTCGTGGTCCGGGCGGGCGATGCCGGTGTGCGTTGCGAGCACCCAGAGCAGCGTCACGAGTTCGCTGCCCTGCGCCAGCGCCGCCTCGTGCCCCCTGGCGTGCTCCTCCGCGCGCGACGGCGACACGTACACGACGAGCTCAACCCACACGTCGGCCAGCATCTCCCACACCGCGCCCTCGCCGGCTTCGTCGTCCTCCACCAGGTGCTTCCCCAGCACGGGGCCCCTCTCGAGCACCGTCATGTCGGCGGCGGCGGAGGCGTCCACCCGGAGCGCACGGATCGTCTCGTGCCGGCTCCGCTCCGACGAGAGGTAGTATCCCCGTGCGCCGCCGAGCGCCGCCTTGATGCCCTTCTTCAGGTCCTTGTAGATGCGCTCCGTGCCTTCCCGGTCGTCCGGCAGCAGCTCCGGCCGGAAGGCGACGAGGTAGGCGCAGTATCTGGACAGCCTCGCC | |||||||||
gi|117211495|gb|CT851602.1|CT851602 CT851602 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD ACCGGCATTGCTTGGCCGGT EST sequence (targeted fragment marked with yellow): GATAACGCACGGCGCACTTCGAAACCCCTCCTAAACCACGGCGTGACCCAATCGCAATGGCGACGCCGCCGGAATCCCTCTCGCCGGCGGCGGCGGCGGTGGAGGATGATTGGGAGGAGGCGCGGGGGCTGCTGTACGAGGCCTACAACGAGCTGCAGGGCCTGGCGGCGGAGCTGGGCGGCGCGGCGGCGCCCGCGCCAGCGGTGGTGGTCGTCGGCCACCAGACGGACGGCAAGAGCGCGCTGGTCGAGGCGCTGATGGGGTTCCAGTTCAACCACGTCGGCGGCGGCACCAAGACGCGCCGCCCCGTCGCGCTCCACCTCCGCTTCAACCCGCGCTGCCACGTCCCGCGCTGCCGCCTCCTCGCCGGCTCGGGCGCGGGGGACGACGAGGACGAAGAGGCCGGCGTCGCCGGCCGCGCAATGCCGCTCGCCGACATCCAGGCATACATAGAAGCCGAAAACATGAGGCTGGAGAATGATCCTTCCCAATTTTCAGAAAAAGAAATTATAATAAGGATAGAATACAAGCATTGCCCTAATCTCACCATTATTGACACTCCAGGCCTCATCCTACCAGCTCCTGGCCGTAAAAACCGAGTTTTGCAGAGCCAAGCTTGTGCTGTAGAGACCCTTGTTCGTGCGAAAATAAAGCATAAGGAAACCATAATACTTTGCCTTGAAGATTGTAGTGACTGGAGCAATGCAACTACAAGGAGAGTGGTGATGCAGGTTGATCCTGATCTTGCCAGGACTGTTCTAATCTCCCCAAAACTGGGACACTAAAATTTTACAGTTTGCACGAACCCTCTGATTGTGAAGTCTTTCTTCACCCCCCGACCTGTGTTCTAAAATGGGTTCCTTACTGGGGGGGAATTATCCCCTTTTTTCACATCCAGTGGCCTTCCGGGAAAAGGTTGGGGTCCCGGGCCTTGAAACCTTGTATTTTCAAATCAAAATGGAAGAAAGTTCAAAAAAAGGGCCCTTCTCCATTTTGAAAAAAAAGTTTGGAAAAAAATGTTTTGCCACCCTCCCTTTGGGGGGGAACAAAATTTTGGGGGGAAAGGGGGGGGAACTTTTAACAAAAAAGGGAGAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGAGAGGGGGGAGAGGGAAAAAAACTTTTGTGGGAGAAAGAAAAACTATTTATTTTTTTTTTGTTTTGTGGGGGGAAGAGAAAAAAGAAAAAAA | |||||||||