mature miRNA: ACGGAAAATCATGGCTGCACTTAA species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|117228294|gb|CT859695.1|CT859695 CT859695 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD ACGGAAAATCATGGCTGCACTTAA EST sequence (targeted fragment marked with yellow): AAGATATCCTCTGCTCGGCTCACAATTACAATTATTTTCACAAAGCTAGCTAGAGCCTCCAACCATATAACTGTACATTCTATTACATCGTTAACCAAAACGGTTTGGTCCAACAAATTAGGCAACGCATTACAACTCTCAAGAAGATCGAGAGCTCGTTTAAAGCCGTCCGATCGTTCGGGAGCCGGTTCCTTGCAACAGACGTCGACTACTAGCAAGCACTGCGATTGATCTCGACAACTCAACCACTTCGTACTAGCCAGCAGAGTGTACTAGGCTCTGCTCGTTCATGCCAATGGCCTCATGGCTGTGAGCAACTGCTACCTCCGTACTGAAATAAATGCAGCCATGAGTTTCCGTGTCCAACTTTGATAGTCCGTTTTATTTGAAATTTTTTTATAATTAATATTTTTATTGTTATAAGATGAATAAACATGAATAGTACTTTACTCGTGACTTATGTTTTTAATTTTTTTAAATTTTTTTTAAATAAAACAAATGGTTAAAGTTGGACGCGGAAAACCATGGTATTTTGGGACGGAGGGAGTACTACAGATTAAAACATACTATGAACCCCACAGCAAAATGGCAGGGTCCCTCTGGGGGGTACCAAGTGCTAATGAATGCCCGCGGGAAAGGCATGGGACAAGGAAAAGGGTCTGCCGTTTCAGGGCCCCAATTGGCCTCCACTCTGTTTTGGCGCAAAATGTGGCAAAACCTACGGGTAACTGGAACCCCCCCAAAATAAAAACCAGGTTTAAAATAAAAGCCAAACTGGCTAGCTCCAAATTTATTTAAATCCCAAACCTAAAAACTATACGGATCCCCCCCTGGGAAATAAATCCTTTGGAAGTTCGGAAAAAAAAAAAGGAAGAAAAAATTCCGGGTACCCCCACTGGCCCTTTCCCCTCCCCCCTTTTATTTTATTCTTTTCTTAAAAAAAAAGAGTTTTGTGCGGGCCGGGGGGTTTTAAAAACACCCCGGGGTTATTTGTGAAACCCCGGTGTCTCTATAAAGGAGAAAAAAAAGGAAAAAAACCCTCACCCCACCCCGGATAATGGGCGGCGGGGGGGGGTTTTTTCTATTTATATGTAGTTGGGGCCCCCCGCCGCCCAGTCTCTCCCCCGTATCTATTTTTGTGCGGCGCCCCCCCCCCCCCCCAATAAAATTATTAATTCTCCCCCGGCGGGGGGCCCACCTTTATCTCTCGCGACGATACGCATTATATACGAGG |