| mature miRNA: ACGGATTTATTCCGTCGGTA species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73893935|gb|DT496673.1|DT496673 WS01124.BR_B21 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01124_B21 5', mRNA sequence ACGGATTTATTCCGTCGGTA EST sequence (targeted fragment marked with yellow): AAAAAAAAAAATCAAGAAATCTAGAGTGAAAAAAGAAGAGGAAAAAATGTCAGGGAGAGGAAAAGGAGGAAAGGGACTGGGAAAAGGAGGAGCCAAGAGGCATCGTAAGGTTCTTCGAGATAACATTCAGGGCATCACCAAGCCTGCGATTCGTCGACTGGCTAGGCGTGGCGGAGTCAAGCGTATCAGTGGGCTTATCTATGAAGAAACCAGAGGTGTCCTCAAGATCTTCTTGGAGAATGTGATTCGTGATGCAGTCACCTACACAGAGCATGCTCGCCGCAAGACAGTGACTGCAATGGATGTTGTATATGCTTTGAAGAGACAGGGCCGTACTTTATATGGTTTTGGTGGTTGATTCAGTGATTCATGTACTGGGCTGATTGAGTTTTAGGTCTTTTAGAACTGGGTTGTGGATAGCTGTATCTCTTGCTACCCAAGTGTCATGTATCTATGTGTTTCTGTTTTAATGCTTGAATGAATGGCTCTTAATTTGTGTTTCTGTTTCCTTTCTGCTTCTTATGATTCGCTTCAATTCTGTGAGCCCTCAATGTCTCGAAACAAGGTCGCGAGCCGATCTGTTTGGCTTCATGATACATATAGGGAAGGAGATCCTGCCAAGGGAGATTAAGCATATATTGGCCGAATAAATCAGTGTGATTGAGCCAAAAACTTGGCGGAGCTCAAAAGGACAGAGGCAAGTCTGTCCAGTGTTTGCTTAGACCCTGTTTGAATTTGATATTTTTTTGCCCTTTAATTTTTTTTTTTTGTGATTTTGGATGTTAATATTAAAAATAAATAAATAAATCTAAAAAAAAAAAAAAAACTCG | |||||||||