miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: ACGTCATCATCATCATCTTCG
species: Cichorium intybus
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|218988057|gb|FL679843.1|FL679843 CIROL012H08 CiRO Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
|||| ||||||||| |||||.
TGCAATAGTAGTAGCAGAAGT

EST sequence (targeted fragment marked with yellow):
GGAACTTGAAGCATTAACGGATCCAATGAAAAAAGAAGTTTCCAGTTGTCCCGTAAAAAGATCGATTCTGTCAACAAAGAGTTGAAGCCCCTTGGACAAACCTGTCAGAAGAAGGAGAGGGAGTACAAGGAAGCCCTGGACGCTTTTAATGAAAAAAACAAAGAAAAAGTACAACTCATCACAAGATTGATGGAGCTGGTGAGCGAAAGTGAGAAGATGAGGATGAAGAAACTTGAAGAACTGAGCAAAAGCGTTGAAACAATACAATAAATTTGAAGACGATGATGATAACGTGATGTTGATGGGTTTAAGCTAATTAGGGTTTGTGTGATGTATTAAAAAAAAAGAAGAAATTTTCTCTTCTTTTTACTACGTGTTTTATATATTGGTTTGGTTTTAAATTTGTACGCGTTTTGACAGTATGTATTTTGCTGATCTAGGTTTGGAATACATTTGTAAAAACAGGTCTGTAACTAAAATCATGTCAAAGAACCTCTTTATTTCCGGTT



gi|218982299|gb|FL681016.1|FL681016 CIRQL005B05 CiRQ Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
| |||||||||||||| ||.
GGAAGTAGTAGTAGTAGTAGT

EST sequence (targeted fragment marked with yellow):
CCCGAGGGTTAGGGTAAAGAGTTCAATGTGGATGAAGTATATGGAACCCGAATCTTCATATATTGGCAGCCTTAAATCTGTAATCGAATTTAATCCCTGTTGAGATTCCCTCCAAGTGACCCTTTTCCTATTGACCAATCCCATGCTTGAGGATGACAAACAACCAGAAATATACTGAAAAAGAAAATCCCATTAGAGACAGCCGAAGAACGATGGTGAAGACCAAGCCATGGCAGAAGTCAAGGAACAAGTAGTCACCAGACAAGAAATAAAGAAAGTGGAAAAGAAGAGAAGTAAAAAACCCGAAAAATCGGCTGCAATGGACGAAGATGAGTCAGTGGAAGGTGATTATGACTTCAAAGTGGATTATATGAAGAAGGGATTTTGCATGTGATGATGATGATGATGAAGGAAACGAGAAATTGCATAATAGAGGCAAAATCAATGGCTTAGTTTGAGTGAGTATCGGTTGAAATGAACTTTTGGAGTTCCATCTTGTGAACCCTTGTTATGAATGATTGGAATTAAACGATCCACTTATTCATTCGGACATCTTTTGGTTAACCAAAAGTTGTTTTTCTTTTTGTTTGAATGAGTTTATAAATTATATTTCCTTGTCAAAAAAAA



gi|218982958|gb|FL673687.1|FL673687 CIRCL002H07 CiRC Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
||||||| |||||||| ||.
AGCAGTAGAAGTAGTAGTAGT

EST sequence (targeted fragment marked with yellow):
CGAAATGCTGCTGCTCGTGCTCGGTACATGAAACCAGCAGCACCTATTACATGTGCTACTTTTGCTCAAGATGTTTTGGAGGGGCGAGCCAAGGTCTCACAATCACACCATCACAAACACCAACCTCTCATGTTTGGACCCGCCAGTCTCGTGGGTGGAAGCCTCACAAGCGACAGGGAAAGGATTGCTGCACAGGTTTTCCAACCTGGTCACAGATTGCCAACGATGAGCATAGAAGAAGCTGGGTTGAAGGAGATGGAGATGATGAATAAGTTTCAGGAGAGTACTGCTAAGATGATACAAGAAGCCAATACTTCATGGCACAATGACAAGTGGAAGCCCAGAGCAGGTGGGGCCGATAATGATGATGATGAAGATGACGAGGCTGCACAGGACAAGGCACGCGCGTTTGATGACTGGAAAGATGAGAATCCTCGCGGTGCTGGAAATTCAAAGCTCACTCCTTGTGGCTGATCTGTCTTGTCTTTTTTGCTCTTCTAAATACTCTGCTTCTTCATGCCGTGATGCTGTACAAATCATGTCATTTGAGGATATATCATATATCATATATATATATGTACGATTCAGCTTATTTTTGTGTAGAATGGTGAATCAGTAAACATTATAACAACAGATTGTTTTGGGATT



gi|218977060|gb|FL680848.1|FL680848 CIRQL002E12 CiRQ Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
||||||||||||||| |.|.
AGCAGTAGTAGTAGTATAGGT

EST sequence (targeted fragment marked with yellow):
AACCCCCTTAAGCCAGCCCAGGGGGTGGGAATATTCCCCCCCCCCGGCGAAAAAACATCCCCCGCTATACGCCGGAGGTGAAGCCCCAAGGTGGCTATAGGGCTTGCCGGTTTAAAAGCCCCAAAGTTCTATGGGGCCCCCCCGATGGGGCCCTGAATCCGCTAAAAAGCCCCTTGTAGTTTAATAAGCAGTGAGCGAAGGAGATGCAGGCAGGGTCGCGTTGACGGGCGGCGCGTAGGTCCGGCGACGGTGGCGGAGAGGAGAGAGGCATCGGAGGAGAAGGTGTTGAGGAAGAGATCGTAGAGGAGCGTTGAGAGGAGAGTGGAGGAGCAGAGTTTGTTTCCTAAATGGAAAGATAGAGAACGTGTGAGCGATGAGTGAGAGATGATGGTGGAGTAGAGGTAACTGGCGAGGGCGGGTTCTGATTCGGCGTCGCGGCGAGCTTCGGCTTTGATTTCATTCCAGACCCAGTCGCTTTCGTTTTCTCCCCGTTGGCGATGGTTTGTGGATATGATGATGATGACGACATCGTGGACTGCGATGTGGCGGGGCGGTCTTGAACCGGCATCTTGGAAAAAGTTGAAAGCGTGTGTGCCTGTGTGGATATCGGTGGTGCACAAAATAGTTTATTTCCGAATATAATATATAGTACAAATTAGGTTCTTTTACCATAATGCCCTTTGTACAAAATTTTCTTGTGCCTAGCTTATTCTACGAATAAAACATATGCCATAAATCAGGTATTGTTCTTTTATCAT



gi|218987617|gb|FL671217.1|FL671217 CIFCL010E03 CiFC Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
|||| ||||||.||.||||.
AGCAGAAGTAGTGGTGGAAGT

EST sequence (targeted fragment marked with yellow):
GTCTTTTTGTTTGGAACGATCCGAGAGGTAGCTTCCAATCATGTTGGTTTATCAGGATTTGCTTACAGGCGATGAGCTTCTTTCGGACTCCTTTCCTTACAAGGAGATTTTAAACGGGATTCTTTGGGAAGTCGAAGGAAAGTGGGTTGTTCAAGGAGCTGTTGATGTTAACATAGGCGCAAACCCTTCTGCTGAAGGTGGTGATGAAGACGAAGGTGTTGATGATCAAGCTGTAAAAGTTGTCGACATTGTTGACACCTTTAGACTCCAGGAACAACCTCCTTTCGATAAGAAGCAGTTTGTTGGATATATAAAAAAATACATCAAACAACTCACCCCAAAACTTGACCAAGAGCAACAAGACTTTTTCAAGAAAAACATTGAGGCAGCCACAAAGTACCTCCTTTCAAAGCTCAGTGACCTTCAATTTTTTGTTGGAGAGAGTATGCATGATGACAGCAGCATTGTGTTTGCTTATTACAAAGAAGGTGCAACTGATCCAACATTTTTGTACTTTGGTGTTGGGTTAAAGGAGGTCAAGTGTTAAAGAGTTTTTATTATTATGTATTTTTAAAACAAGTATTCTAGGGTTAAGTTAAACAGTTAAAGTTTGGATTGTT



gi|218984468|gb|FL681755.1|FL681755 CIRSL001B11 CiRS Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
|| ||||||||||| |||| |
TGAAGTAGTAGTAGGAGAACC

EST sequence (targeted fragment marked with yellow):
TCCCGGGAATTTCAATCAGCTTGGACCAGATAACTTGGATAACTTGGAAAATTAGCAGAGCAGTTCCAGAAGCAGGTGCCAGGGGCAGTGAAGCTGCAGCCGCCCGTCAGCCAAGAGGATGATGATGAAGTCCCGGAACTCGGGCAGGTGAGACTTTTGAGGCTGCTGCAGAGGAAGGACAAAAGTCATAGGGTTTTGAAATGCCCTTATATATGCATTAATTTTAAAGCTTAAGATAATATTCTAGGTATGCAATTTGATATTTGCTTGCATAACTTGTAGGAATATGTATGTTGTTTCTGTCAAATTTTCCGGTGTATTTTGGTTC



gi|218972581|gb|FL682351.1|FL682351 CIRSL008F01 CiRS Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
|||| ||||||||||| ||.
AGCAGCAGTAGTAGTAGTAGT

EST sequence (targeted fragment marked with yellow):
CTAGCCAATACTTTCGTTTTTGGGGTCATCAAGGCTCTAACAACAACCAATGGCGGAATGCTGGCGTCGGAAATGATGCAGTGGTTGAACGGAAACCCAAGAAGCAATGGCAGCAGCGTATTCAGGATTGCAATTGAAAGCGGAAGAAGAGAACAAAGAAGAAATGCAGCTCAATTCTTTGTATAACTACACTACTTCCACCACTTCACAACAAACTCCGGCACATATGTCCGCCACGGCACTATTACAGAAGGCGGCTCAAATGGGTTCAACTAGAAGCAGCAATCAAGGGGACGCTAACGGGTTCGGACTCATGAGCACGGGTCTTCCAACTTCACTTCTTCAAAACAAGACAACAATGACGGATTGATGATGATGATGACGACGACAGGGCCAAAACAGTCCAAAGGAAACGGAGCAAATGAGACTAATGATGGGAAATTGACTAGAGATTTTCTTGGTGTGGGACGGAACGAAAGAAGATCGTTCAATTTGCATCAAGAACTGTTGAAGTTCACTTCTTCAATGGACGATTCAAGTATATGAACGTGGGTAATCAGATGTCATGTATCAGTTCAATGCATGAAAATACACATGATAATGTAAGAAGGGAAAAGGACAAAGGGAGTCACAAGAGGGGAATAATATTGATAGTACAAAGAGGTGGAATATGTTTGCAAAAAA



gi|218978876|gb|FL673007.1|FL673007 CIRBL007A07 CiRB Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
||.|||||||||||||| ||
TGTAGTAGTAGTAGTAGTAGG

EST sequence (targeted fragment marked with yellow):
ATCGGCCTCACAGAAAGGGAATTCATGTTAGAGGCAACTTCAAGGCATCGTGCCTTTCCTCATCTTAGAGTTCTCCCTGAAGATGGAGTTGCGATCCTTGATATTTCTGGTTATCTTGAAGTAGGACATTCAATTGATCATCATAGAGACATGCGCTTGGATATCGATCATATGTCATATGAGGAACTTCTTGCACTTGGTGAACAAATAGGAAGTGTTGGTTCACGTTTATCGGATGATTTCGTTGTACAACATCTAAAAACACGAGTATTTACTTCATCCATTTCCCAAGATGCATCTTCCAATGACCAACAACTTACCTCTTGCGTTATTTGTCAGACTAACTATGATGACCAAGAACAAATCGGGGTGTTAGATTGTGGGCATGAGTACCATGTGGAATGTGTGAAAAAGTGGTTGGTTGTGAAGAACACGTGCCCGGTTTGCAAATCAACAGCGCTTGCTGGAAAAGGAAAGGAATCATGAAAATGGAAGAAATGGGAAGGGAGACATGAGAGCTTGAAAAAGATTTGGGCACCGTGTTTCTTTTTCCTTAGTAAGTAAATGAGAGAAAGAATGGTGTTTGTTGTTTCTCTTGTTATAAATTATGGTAAATATTGAAACCTGGTTTTGTTAACCTTGGTGGGTTGGGCGTTTTGTTGAACCTTTCTGTACAGACTTTTTTTCCTGTTGGTTCACTGGTGGATTGGATGATGATGATGATGATGTGTTTGGGGTATGTACTTATGAATGTT



gi|218977671|gb|FL677216.1|FL677216 CIRKN001B06 CiRK Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
| |||||||||||||| ||.
GGAAGTAGTAGTAGTAGTAGT

EST sequence (targeted fragment marked with yellow):
AAGACATAAGGGGGGTGCAGAATTGTACTGCGGTATGGAATGGAGGGTAAATTGAATACTATACAATGCCTCCAACTAGGAACGAAAAGGGAGAGGTTATGGATGCAAGTATTGTATCAGAATTAGGTAAAGAGTTCAATGTGGATGAAGTATATGGAACCGAATTTTCATATATTGGCAGCCTTAAATCTGTAATCGAATTTAATCCTGTTGAGATTCCTCCAAGTGACCTTCTTCCTATTGACCAATCCATGCTTGAGGATGACAAACAACCAGAAATAACTACTGAAAAAGAAAATCCATTAGAGAACAGCACGAAGAACGATGGTGAAGACCAAGCCATGGCAGAAGTCAAGGAAACAAGTAGTCAACAGAACAAGAAACTAAAGAAAGTGGAAAAGAAGAGAAGTAAAAAAACCGAAAAATCGGCTGCAATGGACGAAGATGAGTCAGTGGAAGGTGATTATGACTTCAAAGTGGATTATATGAAGAAGGGATCTTCTGACATGTGATGATGATGATGATGAAGGAAACGAGAAATCTGCATAATAGAGGCAAAATCAATGGCTTAGTTTGAGTGAGTATCGGTTGAAATGAACTTTTGGAGTTCCATCTTGTGAACCCTTGTTATGAATGATTGGAATTAAACGATCCACTTATTCAATCGGACATCTTTTGGTTAACCAAAAGTTGTTTTTCTTTTTGTTTGAATGCGTTTATGTATTATATCATAGGGGGGGTCCGGTACCCAATGCTCCTATGTCATACTATATTTACTGTC



gi|218987145|gb|FL678641.1|FL678641 CIRNG002A12 CiRN Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
|.|||||||| ||||| |||
CGTAGTAGTAGAAGTAGCAGC

EST sequence (targeted fragment marked with yellow):
AAATTGAGCAATAACAAAAAGCGATCCGTGAGGTTCTTTCCAGTGAGTATCGTCGATGAAGACTGTCAACCGTTGACACAAATCTCTGTACGGAGAAGAATCAAATCTACCGACAATCAAATTTGTCAAAAATCCTATCACCGAAGAGTTTAAATTACTCTCAAGTGAGAAAACCGCCGCATTGAAGAAGCCGCAAGGGAATTGTTGAGGAATTACCAGAAAAAAGTCGAATGCGAGTTCGATTGATCAAGAACAATGTTGAAGGGAGCACCGATATAAACATGAACTACGACGACGATGAAGATGATGATGCCCCACCATACCAGCCCGATCTATTTGAGCTCGAGAACTTTCGCAATCGGAATGAAAAATATCGAGATGAATGCCGGTATACGAAACAACTCATTTTGATACGAATCTACCATGGGTAAATGGTAATGGCTCCCTCATTTAAAGAAATGATTACTAAATTAGGTTATTGTTAGTTATTTGGTGTGGGGTTTTACATGAAGATAAATTAGAAGTGAAATAATTCTCTTTTTGTTATATAGTAGAAGATTGGGTAAAATCGTTTGTCAATGGATGGAAGTTGTGTCTCCTTTCAATTTCGCTGTAAAATGAATTAATACTCGGCAAT



gi|218983465|gb|FL673738.1|FL673738 CIRCL003E06 CiRC Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
| ||||||||||||.||||.
AGAAGTAGTAGTAGTGGAAGT

EST sequence (targeted fragment marked with yellow):
AAATGCGACCCGCGTCACGGCAAATACATGGCCTGTTGTCTAATGTACCGCGGTGACGTGGCGCCCAAAGACGTGAACGCGGCCGTGGGGACCATCAAAACCAAACGAACAATCCAATTCGTCGACTGGTGTCCAACCGGATTCAAATGCGGGATCAACTACCAGTCCCCGACCGTGGTCCCCGGTGGCGATTTGGCTAAAGTGCAACGCGCGGTGTGTATGATTAGTAACTCGACAAGTGTCGCTGAGGTGTTCTCGAGGATTGACCATAAGTTTGACTTGATGTACGCGAAGAGGGCGTTTGTGCATTGGTATGTGGGTGAGGGGATGGAGGAAGGGGAGTTTAGTGAGGCGAGAGAGGATTTGGCGGCTCTTGAGAAGGATTATGAGGAGGTCGGGCTTGAGTCTGGTGAAGGTGATGATGATGAAGAGGAGGAATATTGAGATACTCTGAGTAAGGGTTTAATTTCTTGTTTGACCTGTTTTTCCTCCGTTGACTTTTTTTTAGTATTACTATTGTGTTAGTTGTTGGTCTATTCTGATGTTTTGTTGGGTATGTTTTTAATGTTGTAGTCGAGTTGGTCTTTTGGACTGTTAAGCTGTTTTGAACTCTTTTACTTTGGAGTCGGTGATATCGCAATATGCTGTTTTTTGTTTGTT



gi|218982365|gb|FL673348.1|FL673348 CIRBN002E01 CiRB Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
|.|||||||||||||||||
AGTAGTAGTAGTAGTAGAAGA

EST sequence (targeted fragment marked with yellow):
GGTGAGTAAGGATGGATAGAGATGTGAACTCGGTTCCATGTGATGACTCTGAGGTAACTTTGAATGTATGCTTGGGCAAGCAGTTTACTGGTGGGGAGTTGTTTTTTAGAGGTGTGAGATGTGAGAAACATGTGAATACTGAAACACACCCAGAGGAAATTTATGATCATGCACATTTGCCTGGACGCGCGATTATCCACCGCGGGCGCCATCGACACGGTGCCAGAGCCACCACATCAGGCCATAGAATTAATTTACTGCTGTGGTGCAGAAGTTCGGTGTTTAGAGAGCTGAAGAAACATCAAAAGGAGTTTTTGAATTGGTGTGGAGAGTGTAAAAGGGAGAAGCAAGCGAGGCTTCTTCAGTCCGTGGCTGCGAAGAAAATGGAGTTGCTTGTGGGGCAAGGAGATGGTGGTGCTTTTAATCTTCGTTAGAAGATGATGATGATGATGAATGTGGTTTGTTATTTCAGCGTGTTGCAACATCGTTGTAAATTCAGGTTTCTTTCTCTTTAAGTTGAAGCAGTTGGTTGGACCACATTTCTGCCATTTGGACTTTGATCTTGAAAAGGTCGTTGTGGTGGAATGTTGTTTGTTAGAACTTTTATAGATTATGTGTCTTTTGTGATTCTTGTTGTCATGGAATGTTGTTTGTTAGAATGTGAAATGTATGTTATGTGCTT



gi|218985626|gb|FL680201.1|FL680201 CIROLOO8D06 CiRO Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
|.|||||||| ||||||.|.
AGTAGTAGTAGAAGTAGAGGT

EST sequence (targeted fragment marked with yellow):
TTTGAAAGGAAAAACGGGGCCCCCCAAAAAAGGAAGTTTCAAGACTTCCCTGTTGCTGTAGAAGGAATGGTGAAAACAAACCAGGCATCAGGAATTTGAACCAAAGTGAAATGAAATCCGAGACTAGTACAAGAATGGAATCAGTATTCCGGTTCCGGTCAAGTGGTTCAGTCATCATCCAATGGAATGATGCCCCTCCACCAAGGACCATGCCCCCCCTCCCCCAAAATTCAAGGGCAATAACGTAAATACATCAGAAACCAAACCGGTACCTGAAACTTTAATCAGTTTATGGAATATGGAGATGAAGATGATGATGATATTGAGGAGACAACTGAAGAAACTTTAACAAATAATTCAAAATCAAAACCTTTTTGGGCCGTGTGAAATTGAAGCTGTTGGATTGTAATGTAACTTTTATCCTTCTGTTTTATTTCAATTTGTTTTAGTTTATTTAGGTTATATCGATTGCATGTAAAAGTAATACAGTTATAGTCGGTTTATATTTTAAAGAATGTAGTTCCAATTCAATGCTTAAATAACAGTTAATTTTCGGTATTT



gi|218979597|gb|FL676559.1|FL676559 CIRKL001A09 CiRK Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
||.|||.|||| ||||||||.
TGTAGTGGTAGAAGTAGAAGT

EST sequence (targeted fragment marked with yellow):
GTTACAGGTAGTGCAGAAACTTCGAATAATGATGAGAATGGAGTGAAGAATGCTGTTGAGAAAGGTGGTGATGATTTGGAAGAGTCTGAGGATTCGGATTCAGGTTCAGAGGAGGATTCATCATCATCTTCATCGTCTTCTAGTAGCAGTAGTGAAGGGGGTAAAGAAAGTGAAAGGTGAGGTGGAAATGGAAGAAGGTGAAATACGAGATTTTGAGATTGAGGATGAAGATGAAGATGGTGATGTTGTGAAAGGCCCAATTCGTTCAAAAAATGAGGTTCAGGATCTACCTCCTGTCCCTCCGGTGACTGTAACGATAGAACCACATCACAAGACACTTCCGGTTGGAGTTGTATTATCGATAATGGGTGCACAAGTCATTGTAGAAGGTGTCGAGAATCATAATCCATTAAGCGAGGGTTCAATTTTATGGATCACTGAAAGTAGATTACCATTAGGAGTAGTTGACGAAATATTCGGACCCGTAAAGAACCCGTATTATATAGTCCGATACAACTCAGAAACCGATGTCCCAACCGTGATCCAACAAGGCAGCGCGATCTCTTTTGTACCCGAATTCGCCGATTACGTTCTAAATAACAACAATCTTTACAAAAAAGGTTACGATGCCTCCGGGGAAAATGACGAGGAATTATCCGATGAAATGGAGTTTTCCGATGACGAAAAGGAAGCCGAGTACAAGAAAATG



gi|218973346|gb|FL676774.1|FL676774 CIRKL003G09 CiRK Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
| ||||||||||||.||||.
AGAAGTAGTAGTAGTGGAAGT

EST sequence (targeted fragment marked with yellow):
TGGTGTCCAACCGGATTCAAATGCGGGATCAACTACCAGTCCCCGACCGTGGTCCCCGGTGGCGATTTGGCTAAAGTGCAACGCGCGGTGTGTATGATTAGTAACTCGACAAGTGTCGCTGAGGTGTTCTCGAGGATTGACCATAAGTTTGACTTGATGTACGCGAAGAGGGCGTTTGTGCATTGGTATGTGGGTGAGGGGATGGAGGAAGGGGAGTTTAGTGAGGCGAGAGAGGATTTGGCGGCTCTTGAGAAGGATTATGAGGAGGTCGGGCTTGAGTCTGGTGAAGGTGATGATGATGAAGAGGAGGAATATTGAGATACTTTGAGTAAGGGTTTAATTTCTTGTTTGACCTGTTTTTCCTCCGTTGACTTTTTTTTAGTATTACTATTGTGTTAGTTGTTGGTCTATTTTGATGTTTTGTTGGGTATGTTTTTAATGTTGTAGTCGAGTTGGTCTTTTGGACTGTTAAGCTGTTTTGAACTCTTTTACTTTGGAGTCGGTGATATCGCAATATGCTGTTAAATGGTTGTGTCTTTTTATAACTTGAAGAAGTTGAAATAAAGATGCTTTCCAAGGATTTT



gi|218986697|gb|FL671910.1|FL671910 CINOG04F09 CiNO Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
|..||||||||||||||| .
CGTGGTAGTAGTAGTAGAACT

EST sequence (targeted fragment marked with yellow):
AAACTATCAATAATTCCAGTTGCAGGGTTGTATACCAATTATACAGAGATGAAGTTGTAGCAGAATGGAGGAAAGTGAAAGGGAATATGTCTCTTCATGTTCATTGCCACATAAGCGGTGGCCATTTTCTTCTTGATTTGTGTGCTCGCCTCAGGTTCTTCATCTTCACCAAAGAACTCCCTCTGGTATTGAAGGCATTCGCCCATGGAGATGGGAATTTGCTAAAGAGCTCCCGGAGTTGCGACATCAGTTTGGGTTACTTTCACTCGAACCTTCAAGAATTTAATAGGGTCGAATGTTGGGGCCCACTGAGAGACGCAGTGGCCCTTTCCCCTCATCATCAACATCTGGATCCGCCATTGTTGAAGCTGAAGAAGAATCAACAATTGGGAGGTCCCAAAGCCATGTGTAGAGGCATGCGTATGCTGCTTTCCACCAATGAGTTCAATCCCATGGTCGCATGATCTTGTGAAGAATCAAGATGATGATGATGGTGCCACCCAACAAGGGTTGCAAAAAAAGTTGATGAAAGCTTTTCTTGATGGGGGTTTCCCCCTGTATGTATGTAATGAGATGATGATAAAATATGTAGTGCATTTGTATATATGATTTTTATTGATACCAAGTCCATAATATTTTTAGTTTAAATGGT



gi|218973019|gb|FL672832.1|FL672832 CIRBL004G09 CiRB Cichorium intybus cDNA 3', mRNA sequence

ACGTCATCATCATCATCTTCG
| |||||||||||||||| |
AGAAGTAGTAGTAGTAGAAAC

EST sequence (targeted fragment marked with yellow):
CAACTATAGATTCATGATGAATCAAATCCCATTGCCAAAGGTAGACTACAAAGATGATGATGATGAAGAAACACAAGACTAATAAGGTTGACTTTTAGAAAGTTGATATTAATGTAGATAGATATCTCCATAATTTGTAACATATAAATGCTTAAAGATTTTACTTTGCCTTAAAAAACAATCTCGTACATAAACTTCATTGGTATTTATGAAGCAAAAATATTTGCTTGGCCACCTTTTCGAATATTACAAAAAGCAATTATAACACC