| mature miRNA: ACTTAGTTTATATGACCTAC species: Medicago truncatula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|209562495|gb|GE344987.1|GE344987 MEUAJ14TF JCVI-MT2 Medicago truncatula cDNA 5', mRNA sequence ACTTAGTTTATATGACCTAC EST sequence (targeted fragment marked with yellow): GCAAGTTTTTCTGCTGCAGGCGCTGTATCAGGTCGTATAAGTTACTCAGGGTCTATACCTTATTCTGGAAGCATCTCTATCCGATCAGATAGCAGCACTACCAGCACGCGGTCCTTCGCTTTTCCCATACTGCAATCTGAATGGAATAGCAGCCCAGTGAGAATGGAGAAACCTGATAGGAGCCACTACCGGAAGCAACGCAAATGGAAGAATGGCCTTCTTTGCTGTAAATTTTAAGAGATTAATATTTTCTCTTATAATAGGTTTAAATTTATATATACCATTTAAATTTTACTTGCATAGAGTTTCACAGTGTGCAGTAGGTTTAGTTTGCCTATTGCACAGTCAAAATGCTCAGTGGTGGTGATTTAGAATTACCAATCAATGATCTTATATCTCTGCTGCAAGCAAAGAGTATTGATTTTAGCTTTGCTTGCATCTGATCTACATTTTCTCTTTGATTGGTTATACATGGTTTTATTGATTTTTTCATTTAAAATTTCAACAGCAATCTATTCGTAGTTGATATAAATTGAGTCAGTTTGTG | |||||||||
gi|148767052|gb|ES613746.1|ES613746 MTGland_B014_2007-05-07/MTGlandB014_B05_023_1 Medicago truncatula A17 glandular trichome Med ACTTAGTTTATATGA-CCTAC EST sequence (targeted fragment marked with yellow): TTACGGCCGGGCANCCCAAAACCCTTCTTCCAAAACCATAATTCTCCAACCGATCGATTGTGTTCTGNGAAGATTTTCAAAACCATACTTTCTCACGTTCATTCATGATTTCAAAGAAAATTCGGAGCAAATCAGGTTAGCAAGTGTTGTTCTTCAATAGATTGTGTTTTTCTTGTTATGGGTTCTCAGTTCTGATTTTGTGTTTTCCTTGTTCTGCGATTCACAGTTCTGCGATTTTGTAAACTCAGTTTAAGTAGGTTCATGTAAACTCAGTTTAAGTAGGTTCATATAAACTCAGTTTAAGTA | |||||||||
gi|11899022|gb|BF634864.1|BF634864 NF075D02DT1F1025 Drought Medicago truncatula cDNA clone NF075D02DT 5', mRNA sequence ACTTAGTTTATA-TGACCTAC EST sequence (targeted fragment marked with yellow): GTTGGACTTGGCTGTGGATTACATCAAAGACCTTCAAAAGCAAGCTCAGAAGCTTCAAGATTGTCAAGCAAAGTGTACGGTGCCCACACAAGCAGCAGCAACAACAATAACGGCAAAGAGTGAATTAATTAATTAGTCCAATGTACAGATTTGTAATAATTTGGTATCACCAAGTTTAAAAAATCTAGCTAGATTAGCTTTTATTTGTTAATGCACTTAATTCCAAAGATAAATTCATTCAGCCCTTGATGTACATAATGAAGATAAATTTGTAGGGTTGCACTTGTTCAACAATTATGAGAGAACTAGCTGGGGAAGAAAAGTGGGTTATTATAAATTAAGTTGAGTGTAATTGAGGGTGTACAAAAAGTCCATGTGGTAAGTAGATGCAATTTAAGCATTTATTAGGACCCATATTTGGTGATGAAAAAAAAAAAAAAAAAAAAAA | |||||||||