| mature miRNA: AGAATCTTGATGATGCTGCAT species: Manihot esculenta database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|164400158|gb|DB951894.1|DB951894 DB951894 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_041_N1 AGAATCTTGATGATGCTGCAT EST sequence (targeted fragment marked with yellow): AATGACAATGTTCTCTACCGCAGCATCATCAGGATTCACTTTTTCAGCTACACCTCCCTCTGCTGCCACTCTTCCAGCGAAAACTCTCAACCAAGCAGCCCAAAATTTATGTTTTACGCCACCTGCTACCATGACTCCTAGTAGCTCTCACTTCTATTATCCAGAGAAGCGTCCACGGGCTCCACCATAACTATTCCCTCTGCACTGG | |||||||||
gi|56920704|gb|CK645041.1|CK645041 si.04.I16.5 MCol1522 cassava lambda zap Manihot esculenta cDNA 5', mRNA sequence AGAATCTTGATGATGCTGCAT EST sequence (targeted fragment marked with yellow): GTGGGTTTCCTTTGGTTCAAGGTGGGTAATGGTATTCTTCTAGGGTTGGGGTTTGGCGATCTGGTTGCTTGATGAGATCTCAGAAAAACCATTGATCAGTCAGTATTGGCGGATGCGTCACCATCAAGATTCACAAAACTATGAAGGCTTCATCGGGACGGTGAGTGTACGGCCGGCGGCGGTGGCTCTTCTTACTTAAAAGGTTTCCTTTTTCGTATGAGAATCTTGATGATGCTGCATCGGCAAATATCTGACTACAATATGGGGACTTGTTTACTTACCTTATCAAAAGATCATAATTCGCCAGGGATACGGAGGAAATGAGTTCCGGGTTTGCTGGATCAAGGTATTAAAGAACTACTTTAAGTTGCTCGATTATTACAATGAAGGTGATGCCTCTTTTTCTTTAACTTGTCCATAATTTCATGCTTTTTCTTCACAGTGCTTAATTTCAGATTACTGTATCTAAGATTGAATAAACAGC | |||||||||