| mature miRNA: AGAGAATTGGAGAGAGTGCAT species: Physcomitrella patens database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|208393353|gb|DC904013.1|DC904013 DC904013 ppaa full-length cDNA library; antheridia and archgonia Physcomitrella patens subsp AGAGAATTGGAGAGAGTGCAT EST sequence (targeted fragment marked with yellow): AAAGGTTCTTGGTATTTCTTCGAAGACATGAGGAGAATATTTGGCCTTCAAATCAAGCTGATGTACGCACTCCAATTCTATAGCCGAGCCACGGATAGCGTCTAACACTGGTGTGGAGGCAAGGCTTCACTTATCGAGTTTTTCTCACGGAGTTTATNGT | |||||||||
gi|208392006|gb|DC941854.1|DC941854 DC941854 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten AGAGAATTGGAGAGAGTGCAT EST sequence (targeted fragment marked with yellow): AAGCTGATGTACGCACTCCAATTCTATAGCCGAGCCACGGATAGCGTCTAACACTGGTGTGGAGGCAAGGCTTCACTTATCGAGTTTTTCTCACGGTGTTTATTGTCCAGAGCGGTGGGGGTTCAAGTTGGAAGGGATTTTGAGACAATATCGTTTATCAGATGGCTGCACCATGGGGACTGTTTCCGCAACCCGACAGCGGCATTCTCTCTGTTGTTCCCCTGGTGATTCTAGGTATAGGAATTCTTATGATGTTGAGTGAGTTGACAGGAAACCAGCTGCAATACTCCAAAGTTGCTACCGGGAATGACAGCAAGACGAGGACTCTTTCGGGCAAAACAGGAATGTTTTTGAGCTATTTGCCTTCAGGTGTGGTGGCCAGTGTCTTGGTCGCATACATGCTCGGTGTTTTGCCCATGCTCCCTTCATTGCTGCAGTCCTGTGGAGCTTCCAGCGCTGCGTCTCTCATTGAGCAGGCCGTGTCTAACGACTCCGACAACCGTCTTCTGCTCGTGGCTCTAGCTTTGAGCCTTCTATTCGACAAACGACTCCTGGAGGTTCTGTTCGTCCAGAAGTTCTCCGGAACAACCACCGCCAACACCGTCGCATTTATAACTAACGCCTATTTCTCAAACACGATAATTCTCTTGTACGCGCAACTATGGGTAACGGCGCAAGGTTTTGCAGCACCGACACCTAACCTGAAGTGGCCAGGGTTAGCACTTTTTCTGGTGGCGATCAC | |||||||||
gi|208391216|gb|DC933505.1|DC933505 DC933505 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten AGAGAATTGGAGAGAGTGCAT EST sequence (targeted fragment marked with yellow): GATGTACGCACTCCAATTCTATAGCCGAGCCACGGATAGCGTCTAACACTGGTGTGGAGGCAAGGCTTCACTTATCGAGTTTTTCTCACGGTGTTTATTGTCCAGAGCGGTGGGGGTTCAAGTTGGAAGGGATTTTGAGACAATATCGTTTATCAGATGGCTGCACCATGGGGACTGTTTCCGCAACCCGACAGCGGCATTCTCTCTGTTGTTCCCCTGGTGATTCTAGGTATAGGAATTCTTATGATGTTGAGTGAGTTGACAGGAAACCAGCTGCAATACTCCAAATTTGCTACCGGGAATGACAGCAAGACGAGGACTCTTTCGGGCAAAACAGGAATGTTTTTGAACTATTTGCCTTCAGGTGTGGTGGCCAGTGTCTTGGTCGCATACATGCTCGGTGTTTTGCCCATGCTCCCTTCATTGCTGCAGTCCTGTGGAGCTTCCAGCGCTGCGTCTCTCATTGAGCAGGCCGTGTCTAACGACTCCGACAACCGTCTTCTGCTCGTGGCTCTAGCTTTGAGCCTTCTATTCGACAAACGACTCCTGGAGGTTCTGTTCGTCCAGAAGTTCTCCGGAACAACCACCGCCAACACCGTCGCATTTATAACTAACGCCTATTTCTCAAACACGATAATTCTCTTGTACGCGCAACTATGGGTAACGGCGCAAGGTTTTGCAGCACCGACACCTAACCTGAAGTGGCCAGGGTAAGCACTTTTTCTGGTGGCGATCACAGGAANGGGTACNATCACTGGTTACTCNCCANCTTCNAA | |||||||||