| mature miRNA: AGAGAGTGAGCACACATGGTT species: Solanum lycopersicum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|150434732|gb|ES893325.1|ES893325 LET060_2006-11-04_1/LET060_G12_042_1 Solanum lycopersicum trichomes Solanum lycopersicum cDN AGAGAGTGAGCACACATGGTT EST sequence (targeted fragment marked with yellow): GGGGTGTAGAATCTAATCAAGTGTGCTTATTCTCCTTAAATTCAGTATTAATCTGTTTGTTAAGTAGCAACTACTAATTATGGAATAAATTAAGGGGGTGTTCTCTTTGTAATAAAAAGAGAAGAAATAAAGTTGTTGTAACAATATATAATGCCTAGCTATTTGGTTGAGGTTTTATGGGTTTTTGGATCGATTTACAACAACATGTAATGTTGAAGAAAATGAATATTCAAAGTGTTAAATT | |||||||||
gi|261468287|gb|GT167620.1|GT167620 M82T7el_01_C20_T7-ZL LA3475 Type VII trichomes Solanum lycopersicum cDNA, mRNA sequence AGAGAGTGAGCACACATGGTT EST sequence (targeted fragment marked with yellow): GGGGGTATCAATTTTGTAGATTACAAAAATAACCTCAAGAGATATCCTAAGCGTTCTGCTCTTTGGATGAAGAAATTCCTTCTCAAATAAAATTATTTGTAATATCATGTACGAGTAGAATCTAATCAAGTGTGCTTATTCTCCTTAAATTCAGTATTAATCTGTTTGTTAAGTAGCAACTACTAATTATGGAATAAATTAAGGGGGTGTTCTCTTTGTAATAAAAAGAGAAGAAATAAAGTTGTTGTAACAATATATAATGCCTAGCAATTTGGTTGAGGTTTTATGGTTTTTGGATCGATTTACAACAACATGTAATGTTGAAGAAAATGAATATTCAAAGTGTTAATT | |||||||||