| mature miRNA: AGCCAAGGATGACTTGCCAGC species: Picea glauca database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|270051898|gb|GT739968.1|GT739968 GQ0188.B7P4_A01 GQ018: Clean ROOTS systems - N treatments Picea glauca cDNA clone GQ0188_A01 AGCCAAGGATGACTTGCCAGC EST sequence (targeted fragment marked with yellow): GATTGAGCTCTCGAGTCTGTCATGGCTTCTTCTTGCAGTGGCTGCTTGCAGAGGCTACGCAGAGCAATCTTAACATTGTTTGTAATGTTTATGATGGTGGGTTCTCTGTTAGTGTGCTCTACTCCTCTTCTCATATGCATTATGGACGTTATGCTGCCATGGATTCTGCTTTCCATCAGGCTCGGATATGCTTCTGATTTGAGGGTGCTCTGGGCTTCATATAGTTTTGGGTCTTCTCTCCTTGATATACCCACAATTTCTCTGCTTCGCTCTGTGATTATAATATGTGTTTATTCTGTATTTGATGCACTTGGCCTGTCTTTTGGGCCTTACCTTTGGACAACAGTATTCTGTGGCCTGGTTTCAGGTGTGCTTATTGTTGTTAAGGCATCCTTGGTTATGGCTTCTTCTGCATTAGAAAGCTCCTCATCAGAGTCCAGAGGTTTCCAACTTCCATGGAGTATGCTGGAAATGCTCTTGTTGTCTATTGCCTTGGCTCTTGGTCACATTGTGGTGGCATACAGGAGTAGATGTAAAGCTAGGCGTAAAATGCTTCTCTTCCACCATCTTGATTCAGAAACGGTTGGTCTGTTATCATCATTCTGTCAGAAGCTGGCGTTTTCTTCTGTTGTGCTTATTGGTCATGATGATGGTGGATTGCTAGCCTTGATGGCA | |||||||||
gi|211886110|gb|CO479781.2|CO479781 GQ0188.T24.1_A01 GQ018: Clean ROOTS systems - N treatments Picea glauca cDNA clone GQ0188_A0 AGCCAAGGATGACTTGCCAGC EST sequence (targeted fragment marked with yellow): ATTGTTGTTAAGGCATCCTTGGTTATGGCTTCTTCTGCATTAGAAAGCTCCTCAGCAGAGTCCAGAGGTTTCCAACTTCCATGGAGTATGCTGGAAATGCTCTTGTTGTCTATTGCCTTGGCTCTTGGTCACATTGTGGTGGCATACAGGAGTAGATGTAAAGCTAGGCGTAAAATGCTTCTCTTCCACCAGCTTGATCCAGAAGCGGTTGGTCTGTTATCATCATTCTGTCAGAAGCTGGCGTTTTCTTCTGTTGTGCTTATTGGTCATGATGATGGTGGATTGCTAGCCTTGATGGCAGCTGAAAGGTTGTACAAACGTCAAGATATTTCTAATGTAGAAGTCAAGGGAATTGTGCTGGTCGGTGGAGAAGACACACTAACTCAACTAAAATCAGCTCAAGCCTCAGTATCTAGAATTCAAAATATTAGAGTGGTCACAACTTCCAGTTGTGGACAACTCCCTCATGAAGAGTGTCCAACAGTACTATTGACAGCACTGGTACCTTTCGTCTCTGAATTGAAAACGGAGTTATCCTTAAAATAAAGTTTGGCAGTCAATTATTCCTAAGCTGTTGGTGTGGACCTCCCAAGCCAGTGTGAGGACATGGATAACTAATAAACATGGAAACTGCCATCTTAAATTTCAAAAAAGAAAATCATGTATGCAGGTGAGATACTCCAGTTCTGTTTTTGCACATTGACTGTTTGTCATTCTTTCAAATCTGGAAGATTGAAGTGCTAGTTCTTTTTAGTAGCATGCATTTTGTATTTTGCATAGTCTTTTTCAAATCCTGGGTGGCTTTGATGGCATAGATACGCCCTTCATAGTGTGGCGGCTTAGCCAAAGGAAAGGAACTCTATAAAGAGTATTCCCCAAAAAAGAAGTGTACAGATAAACCTCCAGAGTCATGCTAGTTAACTAAAATACATGAATGTAAAAGTCACTGAG | |||||||||