| mature miRNA: AGCCAAGGATGACTTGCCG species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|29616755|gb|CB621767.1|CB621767 OSIIEa07N24.r OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa07N24 3', mRNA sequence AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): TCAGGTGGGCGACGGCGGCCGGCGACGGCTGCTGCGAGCTCCTCAAGGCGTGACAGCCTTGAGGCGGGGATCTCCAGGCGTGCCCAGAGCTGCTGCTGATCGATCACCATCAGCTTTGGCTGCCTGTAGGCAAATCATTCTTGGCTCTTTACTTGCATTGGGGTTCTTGCAAGCAACTCTCCTCGTCACCTACCAAAACTGTCCCTGAAACTTCTCTAGTGCTGGGGTCTCGATCAGGGATGATGATGTGATGGAGGAGAGGCTTACCCATATGCCTGTAAATTATGGTTAGTGTTCTGATTAAGCAACTAGTAGTACTTGGTAATTACTGGCTATGAATTAGTAGTATGGACTCTGTGGTGTCAGGTTGCTCTTTGTCTGAATAAACTGGAGTCGTTTGAAGCTTTGCAACAGCTGTGAGTGAAACTATGTGCTTGCTTGCTTGCTTGTTGTTGGAGTGATTAAGCTGGAGTTTTGTCTGGTTTGGGTGTGTGAGACCAGTGAGATACTGTGACTGTCGATATCAATGTTGATGAATGATTTATGACCTTGTTTATGCT | |||||||||
gi|33689962|gb|CF318201.1|CF318201 HD--08-D18.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA library (HD) Oryza sativa J AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): AAGCTTCCACTCCACGAAAACCCTCTGCCTCCCTCGCTCGCTGCACCCTCGTCTCGGCGATCCATCCATGGCTGCCAGGAAGTTCTTCGTCGGCGGCAACTGGAAATGCGTAAGTATTCCCCCCAGCACTAGTCGTCTCACAATCCAGATTCCGGATGAGCCGGAGACGCTGCTGATGAGTGATGAGGCTTGGGTTTTATCGATGCGCTGCGCTGTTGCTGCGTGCAGAATGGGGCAGGGGAGGACGTGAAGAAGATCGTCACCGTCCTCAACGAGGCCGAGGTGCCCTCCGAGGACGTCGTCGAGGTGGGTGGTGAGCCCGCCGTTCGTGTTCCTGCCGCAGGTGAAGGGTTTGCTCCGGCCGGACTTCTCCGTCGCCGCGCAGAATTGCTGGGTGCGCAAGGGCGGCGCCTTCACTGGCGAGATCAGTGCCGAGATGTTGGTGAACCTGCAGGTGCCTTGGGGTGATCTGGGACACTCTGAGCGGAGAGCGCTGATG | |||||||||
gi|33688513|gb|CF316752.1|CF316752 HD--06-C22.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA library (HD) Oryza sativa J AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): AACGAAAACCCTCTGCCTCCTTCGCTCGCTGCACCCTCGTCCCGGCGATCCATCCATGGCTGCCAGGAAGTTCTTCGTCGGCGGCAACTGGAAATGCAATGGGACAGGGGAGGACGTGAAGAAGATCGTCACCGTCCTCAACGAGGCCGAGGTGCCCTCCGAGGACGTCGTCGAGGTGGTGGTGAGCCCGCCGTTCGTGTTCCTGCCGCAGGTGAAGGGTTTGCTCCGGCCGGACTTCTCCGTCGCCGCGCAGAATTGCTGGGTGCGCAAGGGCGGCGCCTTCACTGGCGAGATCAGTGCCGAGATGTTGGTGAACCTGCAGGTGCCTTGGGTGATTCTGGGACACTCTGAGCGGAGAGCGCTGATGGGCGAATCAAGTGATTTTGTTGCTGACAAAATTGCGTACGCACTTTCCCAAGGTATCAAGGTAATTGCTTGCATTGGTGAGACCCTTGAACAGAGAGAAGCAGGAACAACGATG | |||||||||
gi|88847160|gb|CI001432.1|CI001432 CI001432 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): CCAATCAATTTGAAACTCCGTAATAAAAAGGAACCAAAGAAGCTTAAATAAAGTTAATATAGGAAAAAGAAATAGAATATAATCATTCAGATGTGCAACAATGCAAGCACTCGCATACCTGTACATGTACGCATCAACATCAAAAGGATCATCATTCGTGTCCACGAGGCATCCTTGGCTAACCGAGCAATCCCCACAGTCATCGAGAACCCAACCATTTAGTTTCCCTTCCTGGATATGGTTCCTAAAAGTCTCGACTGCTTGAGTGCCCCTTTGTTTTGCATACTTGGCTTCTCCCAGAATGTTCATCCTCATCAGCTTGGACTCAGCCGGCTCCTCAAGGTCCATGATGAGTGTTCCTACGCTTCCCTCCAATCCCACGAGTCTCATCCTGACCATCTCGATNATAATCTTCACCACCATGTACGCACCGTCGTCGAGAAAGTTGTTCTCCTTGAGCGCGCCGTGGCCGGTGGTCTCCATCATGAGGTGCGTCTCGACGCCGTCGGCGTTGAGCTGCACGCCCTTGTCAATGACGTTTCGGTAGCCGACG | |||||||||
gi|33686803|gb|CF315042.1|CF315042 HD--03-N01.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA library (HD) Oryza sativa J AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): AACTCCACGAAAACCCTCTGCCTCCTTCGCTCGCTGCACCCTCGTCTCGGCGATCCATCCATGGCTGCCAGGAAGTTCTTCGTCGGCG | |||||||||
gi|86519335|gb|CI159541.1|CI159541 CI159541 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): TTTTTCGGCTGTATCTCTTGATTGAGGCGTGAAATATGTTCTGTCTACGAGTCTAGCTGAAGAGCGATGCCACGGGATACTCTGCACGCGCTCTGCCACGCGTGTTTCCACCACCGAGACCATTATTCGCGCGCAGCTTCTGCGCAAGCTGGGGGTCGTCAAACGCGGCTGCGATGCCACTCGGATCGGCAGCCGTAGCGATCATCATCCTGACCGCTGCACGCGCCGCCTTTTGCCCCGCCTCCTCAAGCATAAGTGCCACCGTGTTGGTCACGGCTCGGGGCAGAAGCGAGAGCTGCGGCTGGTCACCCTTGGCATTGACCTCCTGCACCTTTTTCCAGAACGGCTTGTCTTCGGGGAAGCGCACCAGACGCAGGTCGGTGGCGAGCGCAAGCGTCCCGTCCTCGGTCACTTCGCGGCTGGCACTCGGACGGATCTTGGCGGTGGCTTGCTCGAGCGTGAGGTTGTCCTTGGTCACCATGGCTTCGATCTCGGCCTGGAGAGCGAGTGTCATGGCGTAGTATGCTGAATCCCAGATACCGCCAATCGAGTCGACAAGCCCCTTACCGTACGGCTTGGCCGCGGTATCGGCCGCGGAGGCTTCAGAAGCTGCGACGCCGGCAGTCTTGATTTCGTCGTCAGCCTCGGACTGCGATTTGCGCGATTGCTCGGCAGCCGAGTGAGCCGCCACCGCCAGTCGCGATTCCTCCT | |||||||||
gi|66925503|gb|CX112351.1|CX112351 EI075H21 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): TGTCCTGAGGTACGGTCGGAATCTGGGTCGACCACGCGTCGCCACGCGTCGGAAAAGCATTCAACTGTATACTTCAATCTGGCTGAGTGTGCAAAAGGCACTTCATGTTAGTCCGATCATCAACAAATCTAAATGGGAAACCTGCAGTGATGTTGTTAACACTAACTGGAAGGACTGCGAAAGATCTTGTGCTGCATATCTATCATGAACTTATACAGTATGGTCTTCGTATATGGGTGTTCAGTGGAGATACAGATGCAGTGCTTCCAGTAACATCAACTAGATACAGCATCAATGCCCTCAAACTTCCGACGGTAACCCCTTGGAATGCTTGGTATGACGATGATGGTGAGGTTGGTGGCTGGACTCCAGGGTACAAGGGACTCAACTTCGTGACTGTGAGGGGCGCAGGTCATGAGGTTCCTCTTCATAGGCCCAAACAGGCTCTAATTCTCATCAAATCATTCTTGGCTGGGAGCCCAATGCCCAGTGTACCAGATTTTTACAGTGAATGTGTAACCATATTTTGGCTACAATTAGATATTACCCAGGATCACAAAAGTGGATCCAAGCGAAGGTTGCTAGTATCACATGGAACTCGTACCATATATTGGTAACCATTCTTTCCTACATAAAAATAAGGACACAAGCCTGGCATAGTATTCGTGCCCGAAATCACCCTGGCGTTGACATGACTATGAACCTAGACCACAGTTAATCCGGGTGACGATACATTGTGCGTACAGGATGGTAACCAGGTGAGTATTACAAACAAACTCAGGGTAATTACATGTGGAGACAGATGTAAACACCACGTCATCCCTCGACAGGGGAAGTACATCCGAAAAACCAGTCCAACACATATCCCCCA | |||||||||
gi|29666494|gb|CB662769.1|CB662769 OSJNEd07B15.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd07B15 3', mRNA sequence AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): CATGAAAAGGTTACATTCTGTTGGGAAAATGGGAGAGCGGTATGATCCATGCACTGAAAAGCATTCAACTGTATACTTCAATCTGGCTGAGGTGCAAAAGGCACTTCATGTTAGTCCGATCATCAACAAATCTAAATGGGAAACCTGCAGTGATGTTGTTAACACTAACTGGAAGGACTGCGAAAGATCTGTGCTGCATATCTATCATGAACTTATACAGTATGGTCTTCGTATATGGGTGTTCAGTGGAGATACAGATGCAGTGCTTCCAGTAACATCAACTAGATACAGCATCAATGCCCTCAAACTTCCAACGGTAACCCCTTGGAATGCTTGGTATGACGATGATGGTGAGGTTGGTGGCTGGACTCAAGGGTACAAGGGACTCAACTTCGTGACTGTGAGGGGCGCAGGTCATGAGGTTCCTCTGCATAGGCCCAAACAGGCTTTAATTCTCATCAAATCATTCTTGGCTGGGAGCCCAATGCCCAGTGTTCAAGATTTTTACAGTGATGTGTAACATATTTTGGCTACAATTATATATTACCAAGATCACAAAAGGTAACTCAGACGGGGTTGCTAGTATCACATGGAACTCGTACCATATATTGGTAACAATTCTTCCCTAAATAAAATAGGGAACAAAATCATGAAATAGTTTTCGTGCCACGAATCGACACTGTCTGTTGATATTGATATGAACCTAAGACAAAAGTATTAATCAAGGGTGAACGTTCACATTTTTCTCCTCCAGGACGAGTATGACCTTGTTGAGTAATAACA | |||||||||
gi|88722774|gb|CI746284.1|CI746284 CI746284 Oryza sativa (japonica cultivar-group) 5 days after pollination pistil Oryza sativa AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GAGCTTCCACTCCACGAAAACCCTCTGCCTCCTTCGCTCGCTGCACCCTCGTCTCGGCGATCCATCCATGGCTGCCAGGAAGTCCTTCGTCGGCGGCAACTGGAAATGCAATGGGACAGGGGAGGACGTGAAGAAGATCGTCACCGTCCTCAACGAGGCCGAGGTGCCCTCCGAGGACGTCGTCGAGGTGGTGGTGAGCCCGCCGTTCGTGTTCCTGCCGCAGGTGAAGGGTTTGCTCCGGCCGGACTTCTCCGTCGCCGCGCAGAATTGCTGGGTGCGCAAGGGCGGCGCCTTCACTGGCGAGATCAGTGCCGAGATGTTGGTGAACCTGCAGGTGCCTTGGGTGATTCTGGGACAC | |||||||||
gi|38479966|gb|CF964055.1|CF964055 8322rsiced_11912.y1 Oryza sativa cv. LYP9 trefoil whole plant cDNA library Oryza sativa Indic AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): AATAATCTGGATGTATTGAGTCCATCACAGTGCGAATGTCACGGGTAGATCTGCTGTTTCCAGGCAATTCATTCTTGGCTTTCTATCCCACCCGTTGTTGTTGCAAGTTAAGCTAGCAGTACTTTTCTCAGTGTCCGTGAGACGTTTGTGTAAGATTAGGTTAAACTAGAAGTTGTAATGCTGTATTAAGTGTTTGTAGTTTCTAATATGAACCGTAACAAGGCCAGAGCAGAACTCGTTATACATACAAAATTGATGGCCAGGTCAGTGTTACTGTATTATTATGCAATGGCAGAAGCTTGCATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|112786178|gb|EE592219.1|EE592219 NEW_RNG139-G09 Rice mixture of leaf, root, panicle Oryza sativa Japonica Group cDNA, mRNA se AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): AAGGGTAAGGGTAGGGCAGAGCGGACCGCGGCGGCGATGCTCGCTTGGAAGGAGAAGGTGGCGGACAGGCTCGCCCGCCTCCTCGCCGACTCCCCCGCCTCCCCCTCCTCCGCCGCCGCCGCCGCCGCTGCCGTTGAGCCGCAGGCAACGCCTTTTCCAGTGGAGCATTTTACTTCCCCTAAGAAAGGATCATTATCTTCTTACGTGATGTCCCTTCTACCAACCTCAAATCCGGGACATGAAAGGACTTCACCGAGTTCACAGCATATGAAACCACTGCCTCCTGAATCGCTTCCTAAACGATGGAGGGGGAATGATTTCTTGTGGCATGATCCGCCCCTGGCATTAAGTGAGGAATCTGGATCTGAAAGTGAGAGAGACGAAAGGAATGGAAATTCTAATAACGAGCAGATCCTGCAGTCACACAGGCCCATCGATAACTCAAATGGAAATGAAGAAACATCAACATCAGACTGCACAGACTCTCTTTATTATTTAACTGAAAAGTCTACATTTATATCTCCAAAATTGTTTGGATTCTTTCAATCTTCTCTCCCTGGGACCTTAAAGGGTTGTCACTGGGTTTTGCTATATAGTGCAGCACTTGGAAGCATGGAACATCGCTAAGAACACTTTTCCGTAGGAGTGAAAATCTCCAGGGTCCATGCCTATTGATTGTCGGAGACATGCGGGGGGCTGTGTTTGGTGGCTTGTTAAATGGTCCTCTCAGGCCTACAGAGAAAAGAAAATACCAGGGAACTAATCAGACATTTGTATTCACAACGATTTATGGTGAACCTAGGCTTTTCAGACCAACCGGTGCCAACAGGTACTACTACTTATGCTTGAATGATGCTTTGGCATTTGGAGGAGGTGGGGGTTTCGCGTTGTGCCTCGATGAAGATTTGTTACATGGAACCAGTGGATCATGTCAGACATTTGGGAACTCATGCTTGGCTCATAGTCCAGATTTTGAACTGAAGAATGTTGAGCTGTGGGGTTTTACTCATTCATGGGGTCGTTCAACATAGTTGGCCTTGGATACATCATAAATGAAGCAATCCCAAATCCCAATTGCCCTCTAGTCTAGTCACTG | |||||||||
gi|44675473|gb|CR288907.1|CR288907 CR288907 Oryza sativa library (Han B) Oryza sativa cDNA clone p255f12p5, mRNA sequence AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): CTTGAAGAAGTGCGCAGGGTGACTGCCCATGAAGGGATGAGTCCATATGCATCGGGCGGATAGAACAGAAGAGCATCCTTCAGGGGCAAGGCACATGGATGACATGTCCAGCCAGAGTTCTAGAATACCAATGTCAGTTGATGTTGGAGCTATTTTTGGGACACGACCTGCTCCTAGACCAACGTTAAACAGTGCCGACAAGTCTCGTTTAAAACGGAAACTTGATATGGATCCAGAATTTGGATACACAGAGTAAATCACCATTTTTTCCATACTGGCTTGTTGATTTTTAAAATATTCTTTGGGGAGATAGTTCCACTATCTACCAACAAAAGAGGATTGTGTCGAAAGCCATAAAAACTTCACTGAAGGGCGCTGACAGGATGGCACAGCCAACTACGCTGTTATCGTTTTTGACTACCAAAGCCGGCTCAGGAAGAGGAAACTGAAGAGTTACGTGTTACGATGCTAATTTACACCAGGACGTGCACATGCCATTTCAATTTGGCTGGCATACATAAATCTGTAATCTTTATTGCCTAGATGAGTTTGCTTGTGTGAACCTGTTTTTCCAGTGTTCGCAAAGATTATTCTGAAGGTCTCAAAAACAATAATAAACATACAAAAACTTTTTGCGCGTCGAGCCACAGTAACTTAAACACCAACAGTTGTCTTGCGGCGAATCACCCTTGGCATCGCCAAAGATGTTTAAAACAGGGGGGTTTAAGG | |||||||||
gi|29638400|gb|CB643409.1|CB643409 OSJNEb04B11.f OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb04B11 5', mRNA sequence AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): CCAGTTCACAATGACAAAATTCTCAACTTCTCAAAACACTGCCAAAGTTCAGGAGATCAAAACCCTAGAAAACAAACCAAAACTAGAACAAACCTTTAGATTTTCAACCATTGAGAGTCTTTCCAAAAGAGTATACAGCAAAACATATTTATCTGATGTTGTTGGCTTAGCATCTTACATAGGACAAATCGAAGAAACACAAACAAGTTGTTGGATAAGCAAGATCCGTGACATTATGCTTCGAATTGAATTTCGGCTCTCCCAACGCTCCGGTGTATTTCAAGATAGTCGCCAAGGTCCCTCTAGCCGCAGAGCAAGGCAAGTCATCCTTGTCACTTGAATATATTGATCCCATATTGCAAATGCTCTATGTTTTCCTTTAAGTTATGCATTGTTTTATAATGTTACTAAATGGGATGTTGTACCTACTGTTCTCAGCCCTATTATTTTTGTACCTTATTCCTTTGTAAACTTGGGATGTAACATGACTAGATGTTGGATTAGGAATTGCTTAGCCATGCTTAGTTCAACTACCCTAGCTGTTCCTGGATAGTGGTTTAATGCACGTTCTGCTTGGAATTCTGGTTTGTGAATTTTTGGGGCATGGTGTGACATAGAAAATTATTTTTTCTCATCAAGTCTATGGTAACTAGGCTGATGGTCTGAACAGAATTGAGCAGTCCAGGTAGCCAAGCCACTCTCCAACTAGCAGTTGAGGTAGTCAGATTGCCAGGATCATAGTTTTTTTGGGATTAGTTTTCTAACTTCATAGACTACGCAGTAATACGTTTAGATTTTAGTTTAGGCAGCCAATCACTACTCTTTANGTATCATAGATTAGCAGTTTCTT | |||||||||
gi|86495911|gb|CI138544.1|CI138544 CI138544 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) Oryza sativ AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GACACGATATATGACATTTTTTCTGATCTTTTAGATCAACTTATGAGTTGTAGCAAATACACGATACCATAATATGGGTTCTACATCTATATAGGAACAACAAGAACGAAAAGGGCTGCCCCGTTCGCAAAAAAACATTTATGTACAACGAGAGGGGTCAGCTACAGCGATCAACGAATACTTCTAATAAGGTTACACAAGAGCTCCTGGATGAGGCTGTCGCGAACAATCTGTCAGTCAGCAACTTCTTTCCTTTAAAGAACACAAGCATCCCACTTTTGCCCGTAGATGCTCATACATTTATTGTGCTTCCATTTGCTAGCAATCCTCAAGTTAGATACTAATTAATACCAAGCTGTATGTGAAATGTCCTAGAACATGTAATTTCCCTTTTCCCTTGCACTGATGAGGAGGCATGATGCTTAGAAACGGGGCACTTTTGACAGAGGCCCCATTGTGGGCATTGGTGAAGGCTCAGTAACCGGAGGTCTTGTTTGATGGTTGGCAACTGAATTGTTAATTACCAATTTATTTCCTGTGCTTCTAATACCAGCAGCATCACATTCTGGTTGTTGAGGGTCCACTGATACCTTTACAGGATGTCTTTGCGGATTCTTGTCCTCCCTTAAGAAACCAGGAACAGATAAGTGCCAATTTTTTTCTAGGTGCAGCAATACATCCTTGGCTTCCAGGACTGATGATTTCCTATGCTTCGCAAGGGTACAC | |||||||||
gi|40489633|gb|BX899561.1|BX899561 BX899561 Oryza sativa library (Han B) Oryza sativa cDNA clone y699b10p3, mRNA sequence AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): TGATCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTGCTTACAAGTTCATGCATGTCCATTGCAGAAGGAACAGCAAGATGTTGAACATGTAATGTATGCACTAATGCACATGCAGAGCTGAAGAGACATGATTCTGAGGTAATAAGTCAGTCTTTAAGCATTGCATACTTACTCATTCGTATGTATCTTGGTGGAAATCGTCGGCACAAACAAGCTACGGTACAGATGGCCCTCGAGGATGCTCAAGAGCCAAACGCTAGAAGAAGAGAGCTAGGTGTAGCCAAGGACAGACTTGCCGGCTAACTCCAAGGCGCTTCAGCAAAGCTGAGATTCCCCCAATACCAGGAGCCGGCAAGTCATCCTTGGCTGCATCCCGTTCTCCTCCTCACAGCGCATGGCAACCCAGCAGAAGCTGCCTCAGTGGTTCTACTGCATACTGAACAGTACAGGTACTCTTCCTACTTCTCTTCTTCCTTCCCCTACCATGGCTGCTTTTCTATCATGTGGTTAGATCTGCAAGCGTGCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGGCGCTCCCAATGCAAAGACTTTATTGTGCCCCGTTACCAAAAGGCTAAATTCAGAAAACGGTAATCTTCGGGAGGGCAATAACTACATTTGATATAACTAAGAGAAAACACGTTAGTAAAAGGAAGACATCGGATATCATAAAAAAGGGAGGAAGA | |||||||||
gi|29623405|gb|CB628416.1|CB628416 OSIIEb03P12.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb03P12 5', mRNA sequence AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GGGCACTACTCCGACAAGGCGGCCGCGCAGCTGGCGCGGGTGATCATCGGTGTCGTCGAGGCGTGCCATTCGCTCGGGGTGATGCACAGAGACCTCAAGCCGGAGAACTTCTTGTTTGTCAACCATAAGGAGGACTCGCCACTCAAGACGATCGATTTTGGGCTTTCCATTTTCTTCAAGCCAGGCGAAAATTATTCGGATGTTGTTGGAAGTCCTTACTATGTTGCACCTGAGGTTCTGATGAAGCATTATGGCCGCGAGGTGGATGTATGGAGTGCTGGTGTAATCATTTATATCTTGCTTAGTGGAGTTCCTCCATTTTGGGATGAATCTGAACAAGGGATATTTGAACAAGTTTTGAAAGGAGATCTTGATTTTTCATCTGATCCCTGGCCTGCTATCTCAGACAGTGCAAAGGATTTGGTGAGGAAAATGTTAAACCGTGATCCCAGAAAGAGATTGACTGCACATGAAGCTCTATGTAAGCATAAATATCACATTGCAGAGCATCATGTCAGAGCCTTCTCTAGTGACCCATCTTTATGTTGGCAGGTCATCCTTGGGTTTGTGTTGATGGAGTTGCTCCTGATAAACCTCTTGATTCTGCTGTCTTAACTAGATTGAAGCAATTTTCAGCAATGAACAAGCTAAAGAAGATGGCCCTTAGGGTCATTGCTGAAAATTTATCGGAAGATGAAATTGCGGGATTGAGAGAAATGTTCAAAATGTTGGACACTGATAATAGTGGTCAGATCACATTGGAGGAACTAAAAACTGGCTTGCGGAGAGTTGGTGCNTATTTG | |||||||||
gi|58690165|gb|CK078852.1|CK078852 78189rsicen_1946.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indic AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): CTGCAGGCTCGACATCGTCATGCTATGAAGCGAGCCCGCGGATCAGGTGGTCGGTTCCTTACCAAAAAGGAGCTGCTGGAACAGCAGCAGCAGCAGAAGCCACCACCGGCATCAGCTCAGTCTCCAACAGGTAGAGCCAGAACGAGCGGCGGTGCCGTTGTCCTTGGCAAGAACCTGTGCCCAGAGAACAGCACATCCTGCTCGCCATCGACACCGACAGGCTCCGAGATCTCCAGCATCTCATTTGGGGGCGGCATGCTGGCTCACCAAGAGCACATCAGCTTCGCATCCGCTGATCGCCACCCCACAATGAACCAGAACCACCGTGTCCCCGTCATGAGGTGAAAACCTCGGGATCGCGGGACACGGGCGGTTCTGGTTTACCCTCACTGGCGCACTCCGGTGTGCCCGTGGCAATTCATCCTTGGCTTATGAAGTATCTACCTGATAATAATCTGCTGTAAGTTTATATGCAATGCAACCTCTGTCAGATAAACTCTTAT | |||||||||
gi|58656306|gb|CK044986.1|CK044986 48532rsiceh_18333.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GCACGAGGGAAAAAATCGAAAAACCCCTCGAAAAACGGCGAAACGGGTGGAGAGAGTGGAGGAGAGAAAGAGGGAGCTCAAAAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGCGGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGGGGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGAGGCGTCCACGTGCTCGTCGTCGTCGTCGGCGTTCAACCCCGGGTCGTCTGGGGCGGCCTCGACCTCCTCCCTCTCCGCCTTCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGCCGGCGACGAGCGGCGCGACATGGCGTGGCTGCTGGACGCCTTCGGCACCGCCACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAACG | |||||||||
gi|88356620|gb|CI617703.1|CI617703 CI617703 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): ATTATTTATCTACATCTCTGTGGCAGATGCGATATTTGCTCCAAAGGTGGAGCGAATGTCGTACGCTGCCTCGCGCACCCCTCGGCCAAATAAGAGCGGCGGGCTGAGGGAAGATGTCGTTGATGGATTTGATAGAGTTGCTAAGGGTGGGTGAACACCGAGGCGGCTCACCCCTGGCTCTCTCTCACTCCCTACCGAGGGACTGCCCATGGCGCAAAGGGGCACCCCATGTGGCGGCTCAACCTTGGCTTGCTCGCGCTTCCCGCCGAGGGATTGCCCATGGCGCAAAGGGGCACCCATGGCGGCTGATTTGTTGCTCTGCATCCAATCCCTGGAGAAGGCTCTCACATGGATGGTGGGCCTCTTCTGGGGCCTGGCCCATGGAGTGTCGCACCTGTACATAGGAACTGCGGGCAGCTGTTGGA | |||||||||
gi|87021103|gb|CI271910.1|CI271910 CI271910 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): CTTTTTATATGTATATGTAGATATTCACGCTTGCATATATAGTTGCATATTCTTCGCGACAATTATGATATATATCCCATATTTGTGAGCGTATATATCATGATCAAGTTAATGATAAAAAAAATGAATTTGACTAGCCCATTATCTAGTTAATTGTTCTAGTAGCACGGCGTTCTGGGCTTAATTAATTAATTATGTAGAATAATAAACTTCATTTTTCTTCTTATTATCACACGGTGATGTTGAGCACGAGCGGCGCGTCATCCTTGTCGACGGTGAACTCCTGGGAGATCTTGGCGCCGGCGGGCGTGACGACGTCGACGTGGTACGCGCCGTGGTGGCCCCGGAACCTGAACTCGCCGTTGCCGTCGGCGCGGCCGTGCGCGCGGGTGAGCCACTCCCGCTTGAGCTGCAGCAGGCGGCGGCCGGCCTCGTTCACCTCCCCCTCGGCGTCGACGAGGTGGGCGTCGTCGCGGCTCATGGAGAGCTCCCAGAACCCCCAGAGCACGACGCCGTCCACCGCCGGGTGCGCGTACGCCTCCCGGAGCATCGCCTCCAGGTCGTCGGCGCGGACGTGCTCGTTCGCCGACGACACGTCCAGCTCCGTGAACCACAGCGGCAGGCCCAGCACGGCGAGCCGGTCGAGCGCCGCGCGCACGACGGCGCCG | |||||||||
gi|29618103|gb|CB623115.1|CB623115 OSIIEa10K01.r OSIIEa Oryza sativa Indica Group cDNA clone OSIIEa10K01 3', mRNA sequence AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): TTTTAAGACGGAGGCAGTCACGTGCGAAGGCTGAACTTGAGAAAAAAGTTGTTAAATCAAGAAAGCCCTATCTTCATGAGTCTCGTCATCAACATGCTATGCGAAGGGCAAGAGGAACGGGTGGACGCTTCCTGACCACAAAGAAAAATGAAGATGGTGCTCCCAGTGAGAAAGCCGAACCAAACAAAGGAGAGCAGAACTCCGGGTATCGCCGGATCCCTCCTGACTTACAGCTCCTACAGAAGGAAACATGAAGTAGCGGCTCGAAACCTAGAACAGTGGTTTTTGTCCCCCGGCATTCACTCTTGAGGGTGGATTCTTGCTCCAGAATTGTGCTGCCATCTTTCAAATGATTTTCATCGTGCAAAGTAATTATATGTACATTCCTCTGAATGATTTATGCCCCAATTGTTGATCCTGGCAGGGTAATAATCTGGATGTATTGAGTCCATCACAGTGCGAATGTCACGGGTAGATTTGCTGTTTTCAGGCAATTCATTTTTGGCTTTTTATCCCACCCGTTGTTGTTGCAAGTTAAGTTAGCAGTACTTGTTTCAGTGTCCGTGAGACGTTTGTGTAAGATTAGGTTAAACTAGAAGTTGTAATGCTGTATTAAGTGTTTGTATTTTTAATATGACCCGGAACAAGGCCAGAGCAGAACTCGTTATACATACAAAAATTGATGGCCAGGTCAGTGTTACTGTATTATTATAAAGGGGCAGAAGCTTGCATAAAAAAAAAAAAAAAACTTTAAAGG | |||||||||
gi|29658017|gb|CB654292.1|CB654292 OSJNEc06G01.r OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc06G01 3', mRNA sequence AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GGCAGTCACGTGCGAAGGCTGAACTTGAGAAAAAAGTTGTTAAATCAAGAAAGCCCTATCTTCATGAGTCTCGTCATCAACATGTTATGCGAAGGGCAAGAGGACCGGGTGGTCGCTTCCTGAACACAAAGAAAAATGAAGATGGTGCTCCCAGTGAGAAAGCCGAACCAAACAAAGGAGAGCAGAACTCCGGGTATCGCCGGATCCCTCGTGACTTCCAGCTCCTACAGAAGGAAACATGAAGTAGCGGCTCGAAACCTAGAACAGTGGCTTCTGTCCACCGGCATTCACTCTTGAGGGTGGATTCTTGCTCCAGAATTGTGCTGCCATTTTTCAAATGATTTTCATCGTGCAAAGTAATTATATGTCCATTCCTCTGAACGATCTATGCTCCAACTGTTGATCCTGGCAGGGTAATAATCTGGATGTATTGAGTCCATCCCAGTGGGAATGTCACGGGTAGATCTCCTGTTTCCAGGCAATTCATTTTTGGCTTTCTATCCCACCCGTTGTTGTTGCAAGTTAAGCTAGCAGTACTTGTCTCAGTGTCCGTGAGACGTTTGTGTAAGATTAGGTTAAACTAGAACGTCGTAATGCTGTATTAAGTGTTCGTATTTCTAATATGAACCGTAACAAGGCCAGAGCAGGACTCGTCATACATACAAAAATTGATGCCCAAAAAAAAGGGGAAAAAAACTCGAGGGGGGGCCCGGTACCCAG | |||||||||
gi|44671336|gb|CR284770.1|CR284770 CR284770 Oryza sativa library (Han B) Oryza sativa cDNA clone y804g08p5, mRNA sequence AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GCATATTACACGAAGACATGACCATCCATAGCTTTGATCATCTCCGGACACACTTCTTCACCCCGCTCCCGAGCCTCATGGACGTCGAGCACGGGGCTGGTAACCCCTTCAAGTGGACAGCAGCCTCTGATGGCTGCTGTGACCTCCTCAAAGCATGACTAGAGGGGGGATACACCGGGCAGCCGAAGCGGGCAAACATCAGCAGTTTCTGCTGGATGCATTGCCCAGCTCCAGTTCAGGGATTGTCCCTGCTGGTATTGGCTGTCTGTAGGCAACTCATTCTTGGCTGATCGGTTCCGCTCATCGCCTACTTGTCCCGGAAACTCCAGCACCGGTTTCTGGGATCCTGCGGTGATCAGAACAAACCATCGCGTGTAAAAAAAAAAATCATCTATGCTATGCTGTTACTGCTTGCTACCATTATCTGAACTGCTACTACTAGGTAGCAAGCTTAATCTGGCAAGGTAAATAAAGTCTGGAACTTTGGACTGGTTCCAGTGGTGATGATTGTGGTGTGCTTGTATCCTGATAACTATTGTGAGTTTGAGAACTGGCTTTGTTGATCTACTGAACTACTACTGTAGCACTATGCTTGAAGTCTGGGTGGGCTGGGTTGCACGCTGTATGGTCAAAAAACTCCACCTGTGATGCTCACGAAACAAACAAAACACAACACCTGTCCCGCTCGCCCGCGTCTTACTCAAGAGCTTTCTGCGGGCATCGCCATGGCATCGCACAGTGTAATATGGGGGAAAAACGAAGAGAGGGGTGCGGAACAGGAAACCCTCCCGGAAAAGACCGCCCCCCCCGCCAAGAGAGAGCCGTGACCACACTACG | |||||||||
gi|86853947|gb|CI329393.1|CI329393 CI329393 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): CTATTGAAAGGATATCAAAATATTATAGTCTCTACATACTCTACAGAAAGAGCAAAGCTCTTGTTCGATCTTCCAGTAGGGATGTAAAAGTTATACATACAAAGTGTAGAAAGCTAATGATTATAATATAATATCTACTTTACAAACTTTTGTACTTCGGTGATGTCAACAAACTCATTGACTCCACTCGTCAGTAGATACCTGTCAAGAAGATCCTTTGCCATGGATTTGCATCCACCAGGGATAGAAGACTGCATATTTATTGGTATGTTGGGGTTATGTACACTTTGGCGAATGTGGACCCACCCCAGTTCTCCCTTGTACTCATCAAAAAATTTAGCCCTGTACATGTACGCATCAAGATCAAAAGGATCATCATTCGTGTCCACGAGGCATCCTTGGCTAACCGAGCAATCCCCACAGTCATCGAGAACCCAACCATTTAGTTTCCCTTCCTGGATAT | |||||||||
gi|29623466|gb|CB628477.1|CB628477 OSIIEb04B05.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb04B05 5', mRNA sequence AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GCGGCGCCGGGCACCTTGGGTGACGGCCGAAACTGTACGGACAACGCAAAATGTGGGGATACGGACGGCATCGTCCTTGACGGCACCTCATCCTTGGTGGGTTCCAAAATCCACCGGGTGTATTATATTTATATTAAATCTTTAGTTTTCCGGCCACTATCGACAGTAAATCGGTCCCTGAGAGGCCTCCGATCTGCTACAGTATAACAGTGCCCTTTCCCCACATCAGCCGTCCGATCCGGCAGTCACGGCACATCACAACCGTCCACCTCCCCATCACCTCCCCCAATTCCCAGTCGGTCGTGCCCTAATCCCTCATTTCCTCTCCCCTTCCTACGCGCCGCCGCCGCCGCCACCGCGACTCCTCGCATTCGTCCCCACCACATCTGAGCCAGCGGCCGCCCGCCCGCCGTCGCTACCTCCTCCTCGAGCCAGCGGCCGGCACCACCACCTTCCCACGGAGCCAGCGACCGGCGCTATGTTCTCACGGAGCCGGGCGCGGTGCCATCTTCTCGCGGAGTCACTGGCCCGCACCGCCGCTACCTTCTCCTCATAGAGCCAGGGATGTCGACATCATCGCCGTCTGTGTCCGCTTCTTCGCACAGCTACGCCAGCTTGCGGCCACTACTACACCAGGATTTGGGTGTGGGTGGAGCAAGTGTGCCAGCCACTGCACGCCGTCCACTCCCATGAGAAAGTCAGCTCCATCAAGATGAACGAACATCCAGCCACTTGCGCGCTCCTCCATTTGCTGCCGTATGAGGA | |||||||||
gi|33821343|gb|CF336482.1|CF336482 JMT--06-I22.g1 AtJMT-overexpressing transgenic rice plasmid cDNA library (JMT) Oryza sativa J AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTACAAAGATATAAAAGGTCTTTAGCTTGGAATGAGAGAGCTAAGGCAAGCCCGGCCCAAGGCAGCTCATTTTCAACAAGTACGCGGTCAGAAATCACTTTCCCCTCCCATTTGCCTGGGAGCTCATTCTCCACATAAAGCACTAAAATGATATTCTCAACCATATGCATTGTTACTACTAAGTTATGCAATGAAATGATATGAGAGTGAATAATTATCAGAACCAAATTATTTGGCTTAAAATGGCGTGCCATCGGAAATGGTTTGATGCAATGACAACACATATTCCACAGCTTAGGAGAAGGAGAAACAAATGAGGAGTTGAGCAGTTCCATCTTTTCAAGAACATATCACTGTTCCTTTTCAGCTTGCATTTCAAGCCTTTCTGTACTTCCCTTATCACCTTAATTCTTCACACCATACCTCTGAATTTGTGATGGATGATCTGAAGAATGGAATCTTACCTAGAATTAGATCAAAGAACTGAAAGAATCACCTACCGAAGATCGCGAGATGTTGAGAGCTAGAAAGAGGGATACAGCCTAGCATGGGGGGATGAGAATCACTCTCTTAGCCATGAAGGCTCACCATCTTCCATATTTCATCCACCATCGGAGAACCCCAAGTGGGTTCCAGTGATGAACCAAATAGTGGAGATAGGCAAGCCATTCTTGGCTAACAGAGGCAATCTCCTCATCTCCATGT | |||||||||
gi|117212327|gb|CT857557.1|CT857557 CT857557 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): TAGTCCGATCATCAACAAATCTAAATGGGAAACCTGCAGTGATGTTGTTAACACTAACTGGAAGGACTGCGAAAGATCTGTGCTGCATATCTATCATGAACTTATACAGTATGGTCTTCTTATATGGGTGTTCAGTGGAGATACAGATGCAGTGCTTCCAGTAACATCAACTAGATACAGCATCAATGCCCTCAAACTTCCGACGGTAACCCCTTGGAATGCTTGGTATGACGATGATGGTGAGGTTGGTGGCTGGACTCAAGGGTACAAGGGACTCAACTTCGTGACTGTGAGGGGCGCAGGTCATGAGGTTCCTCTTCATAGGCCCAAACAGGCTCTAATTCTCATCAAATCATTCTTGGCTGGGAGCCCAATGCCCAGTGTTCAAGATTTTTACAGTGATGTGTAACATATTTTGGCTACAATTAGATATTACCAGGATCACAAAAGGCAATTCAAGCGAGGTTGCTAGTATCACATGGAACTCGTACCATATATTGGTAACAATTCTTCCCTAAATAAAATAGGGGAACAAAATCATGGGAATAGTTTTCCGTGCCACGAAATCGACACTGTTCTGTTTGATATTGGATAATGAACCTTAAGACAAAAAGTTATTAATTCAAAGGGTGAAACCGTTCACATTGGTTGGTCGTACAAGGAATGGTGTATAACCATTTGTTGTGGTAATGACAAAATCCTATTAAATCAAGGGGTGAAATGGTTCCCATTTGGTTGTTCCCAAAAAAAAAAAAAAAAAAAAACCTCCAAGGGGGGGGCCCCCGGTTACCCCCATTTCCCCCCTAAAGGGGGAGTCCTATTTACCGCCCCCCCCCCCCTTGGCCCCTCCTTTTTTAAAACCGCCCCGGACCGGGGAAAAAAACCCCTGGGGTTATCCCCAAACCTTAAAACCCCCTTTTGACCCAAAATCCCCCCCCTTTTCCCCCCCCCGTGTGGGGTAAAATAAACCAAAAAAAAAGGCCCCCCCCCCCACCTTTTCCCCCTTTTCCCCCCCAAATTTTTTTCCCCACCACCCCCATAAAAAGGGGACAAAAAGAGGGAAAAACACCCCCCCCTCTTGAAACCACGCCGCCACCACTTAATAAAGCCCGGCCCGCGGCGGGGGTGGTGGGGTGGGGGGTGTTGTTTTACGCACCCCGCAGCACAAGATGGGTGGAGAGCCACCCCATATAAAAATAATTGTTTGTGTAGGGACAGGAGCGCCCCCACCGATAGAGAAGGCGCAGCCCACGCCCGCCCCCCCTTCTTTTTTTTTATTCTGCTTTTTTTTTTTTTTTTGTTCTCTCTCTTCGCTCCCTCTCTCTTCTTGTTCTTCTTTTTTTCTTTTCTTTATACTCTCGTTC | |||||||||
gi|29659828|gb|CB656103.1|CB656103 OSJNEc10A20.r OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc10A20 3', mRNA sequence AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GCGGTATGATCCATGCACTGAAAAGCATTCAACTGTATACTTCAATCTGGCTGAGGTGCAAAAGGCACTTCATGTTAGTCCGATCATCAACAAATCTAAATGGGAAACCTGCAGTGATGTTGTTAACACTAACTGGAAGGACTGCGAAAGATCTGTGCTGCATATCTATCATGAACTTATACAGTATGGTCTTCGTATATGGGTGTTCAGTGGAGATACAGATGCAGTGCTTCCAGTAACATCAACTAGATACAGCATCAATGCCCTCAAACTTCCAACGGTAACCCCTTGGAATGCTTGGTATGACGATGATGGTGAGGTTGGTGGCTGGACTCAAGGGTACAAGGGACTCAACTTCGTGACTGTGAGGGGCGCAGGTCATGAGGTTCCTTTGCATAGGCCCAAACAGGCTTTAATTCTCATCAAATCATTCTTGGCTGGGAGCCCAATGCCCAGTGTTCAAGATTTTTACAGTGATGTGTAACATATTTTGGCTACAATTATATATTACCAAGATCACAAAAGGTAACTCAGACGGGGTTGCTAGTATCACATGGAACTTGTACCATATATTGGTAACAATTCTTCCCTAAATAAAATAGGGAACAAAATCATGAAATAGTTTTCGTGCCACGAATCGACACTGTCTGTTGATATTGATATGAACCTAAGACAAAAGTATTAATCAAGGGTGAACGTTCACATTGTTGTCGTACAGGATGTGTATAACATTGTTGTGTATAACAAAACTATTAAGGAAGGGTGAATGTTCACATTGTTGTCGAAAAAAAAAAAAAAGAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTGTC | |||||||||
gi|88521964|gb|CI449688.1|CI449688 CI449688 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): CACAACTAAACTAATCCTTAATCCCATCAATATATTTCTGGTTTACATTGATATACATCACTGTACATGCATGACCTGGAAGCTAAATGCAAACCATGCAATGGCCTCACGTGAGAGAAAAAGAACAAGACGTAGCCAAGGACAACTTGCCGGAAAATGTCAGCATGGATCTAAAACAGTTGGGGGCACATATAGTACCTTGAAACATGCATACACGTACCGGCAAGTCATCCTTGGCTGCATTCCGTTCTCTATCTCATTTCACGAGTGGCCACTGATAGCCATAACTCATACCTAGCATTGGGTGATAACAAGCACCAAATAGTCTCTCTATACTTCTCTCGGAACTTCTCTAGGATATGCACCACTAGATGATGCATGCCATCGACTGCC | |||||||||
gi|163927744|gb|EG712492.1|EG712492 Os5MPREST0503 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-B2F12S, mRNA s AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GGCCATTACGGCCGGGGACAGCTTCCACTCCACGAAAACCCTCTGCCTCCTTCGCTCGCTGCACCCTCGTCTCGGCGATCCATCCATGGCTGCCAGGAAGTTCTTCGTCGGCGGCAACTGGAAATGCAATGGGACAGGGGAGGACGTGAAGAAGATCGTCACCGTCCTCAACGAGGCCGAGGTGCCCTCCGAGGACGTCGTCGAGGTGGTGGTGAGCCCGCCGTTCGTGTTCCTGCCGCAGGTGAAGGGTTTGCTCCGGCCGGACTTCTCCGTCGCCGCGCAGAATTGCTGGGTGCGCAAGGGCGGCGCCTTCACTGGCGAGATCAGTGCCGAGATGTTGGTGAACCTGCAGGTGCCTTGGGTGATTCTGGGACACTCTGAGCGGAGAGCGCTGATGGGCGAATCAAGTGATTTTGTTGCTGACAAAATTGCGTACGCACTTTCCCAAGGTATCAAGGTAA | |||||||||
gi|58657242|gb|CK045922.1|CK045922 47978rsiceh_17286.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GCACGAGGAAAAAGAGAAAAAAATCGAAAAACCCCTCGAAAAACGGCGAAACGGGTGGAGAGAGTGGAGGAGAGAAAGAGGGAGCTCAAAAGATGAGGCCTTCGAAGAAGAAATCGAAGAAGAAGAAGCCCTCGCCGGCGGCGGCGGCCGGCGCGGCGGCGCCGACGACCCCTCCGGCGGCGGCGGATGGGGGAGCGGGGGGCGAGTCGTGCTCGCCGCGGTCGGAAACCCTAACCCTAGCTGCTGCGGCGGCGGCGGCGGTGGCGTCGGAGACGGAGTCGAGCAGCAGCTGCGAGGCGTCCACGTGCTCGTCGTCGTCGTCGGCGTTCAACCCCGGGTCGTCTGGGGCGGCCTCGACCTCCTCCCTCTCCGCCTTCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGCCGGCGACGAGCGGCGCGACATGGCGTGGCTGCTGGACGCCTTCGGCACCGCCACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGC | |||||||||
gi|117229023|gb|CT853655.1|CT853655 CT853655 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): AGAGGGGCTTTGCACTTGCAGAGGAGAGAAGCAAGGTGAGAAGTGAGGAGGCAGCAAGGGAGGAGGTTTGCCGGAGAGGGGACATGCTCCCTCCTCATCTCACAGAAAATGGCACAGTAATGATTCAGTTTGGTCATAAAATGCCTGACTACGAGTCATCAGCTACCCAATCAACTAGTGGATCTCCTCGTGAAGTGTCTGGAATGAGCGAAGGAAGCCTCAATGAGCAGAATGATCAATCTGGTAATCTTGATGGTTACACGAAGAGTGATGAAGGTAAGATGATGTCAGCTTTATCTCTGGGCAAATCAGAAACTGTGTATGCACATTCGGAACCTGACCGTAGCCAACCCTTTGGCATATCATATCCATATGCTGATTCGTTCTATGGTGGTGCTGTAGCGACTTATGGCACACATGCTATTATGCATCCCCAGATTGTGGGCGTGATGTCATCCTCCCGAGTCCCGCTACCAATAGAACCAGCCACCGAAGAGCCTATTTATGTAAATGCAAAGCAATACCATGCGATTCTCCGAAGGAGACAGCTCCGTGCAAAGTTAGAGGCTGAAAACAAGCTGGTGAAAAACCGCAAGCCGTACCTCCATGAATCCCGGCATCAACACGCGATGAAGAGAGCTCGGGGAACAGGGGGGAGATTCCTCAACACAAGCAGCAGCCTGAAGCTTCAGATGGTGGCACCCCAAGGCTCGTCTCTGCAAACGGCGTTGTGTTCTCAAAGCACGAGCACAGCTTGTCGTCCAGTGATCTCCATCATCGTCGTGCGAAAGAGGGCGCTTGAGATCCTCGCCGTTGCTGTCATGGCAAATCATCCTTGGCTTATGTGTGGTGCCCAGCAAAAAAAAATCTGACTGAACCTGTGTGTAAACTGATGAGTATGGGTGGGGTTTTTTGTCCCACCTGTAACTTGGGGTGGCTTGCCTTCTGGTGTTTTGTTGGTTCCTCTTCCCTTCCTTAGTTTGGAAACCGGGGCCAGCTTGCACGCTTGGTCCCCAATAAATTTGGATCATTCCCTTAACTTTGGGGCCCCAGGGACCAAAACTTAACACCCCCCCTTTTTGTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAAGGGGGGGGAGGGCCCCCCCCACAAGAGCGCGGTCGCTCGACGCTGCCCACGGATGGTTCGTCCCCACACCCCCACACCACTGTTGTCAGGTTCATCAAAATAAAAATATGAAGTGTGGTCGGGGGGGGGGAGGGGGAGGCGGTCCCGCGCGCGCCTCCCCCCCTCTCACCATTACCTATTCCTTATTTATTTGTTTTGTTATTGATTGAG | |||||||||
gi|84117623|gb|CD151390.1|CD151390 3N07 Rice pathogen-induced subtraction cDNA library Oryza sativa Indica Group cDNA clone 3N07 AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GTGTGAAAACCTCGGGATCGCGGGACACGGGCGGTTCTGGTTTACCCTCACTGGCGCACTCCGGTGTGCCCGTGGCAATTCATCCTTGGCTTATGAAGTATCTACCTGATAATAGTCTGCTGTCAGTTTATATGCAATGCAACCTCTGTCAGATAAACTCTTATAGTTTGTTTTATTGTAAGCTATGACTGAACGAACTGTCGAGCAGATGGCTAATTTGTATGTTGTGGGT | |||||||||
gi|163926092|gb|EG712828.1|EG712828 Os5MPREST0807 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-C4F12S, mRNA s AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): ATTACGGCCGGGGAACTTATACAGTATGGTCTTCGTATATGGGTGTTCAGGGGAGATACAGATGCAGTGCTTCCAGTAACATCAACTAGATACAGCATCAATGCCCTCAAACTTCCAACGGTAACCCCTTGGAATGCTTGGTATGACGATGATGGTGAGGTTGGTGGCTGGACTCAAGGGTACAAGGGACTCAACTTCGTGACTGTGAGGGGCGCAGGTCATGAGGTTCCTCTGCATAGGCCCAAACAGGCTCTAATTCTCATCAAATCATTCTTGGCTGGGAGCCCAATGCCCAGTGTTCAAGATTTTTACAGTGAT | |||||||||
gi|29637795|gb|CB642804.1|CB642804 OSJNEb03C21.r OSJNEb Oryza sativa Japonica Group cDNA clone OSJNEb03C21 3', mRNA sequence AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): AAAAAAGTTGTTAAATCAAGAAAGCCCTATCTTCATGAGTCTGGTCATCAACATGCTATGCGAAGGGCAAGAGGAACGGGTGGACGCTTCCTGACCACAAAGAAAAATGAAGATGGTGCTCCCAGTGAGAAAGCCGAACCAAACAAAGGAGAGCAGAACTCCGGGTATCGCGGGATCCCTCCTGACTTACAGCTCCTACAGAAGGAAACATGAAGTAGCGGCTCGAAACCTAGAACAGTGGCTTCTGTCCACCGGCATTCACTCTTGAGGGTGGATTCTTGCTCCAGAATTGTGCTGCCATCTTTCAAATGATTTTCATCGTGCAAAGTAATTATATGTACATTCCTCTGAATGATCTACGCACCAATTGTTGATCCTGGCAGGGTAATAATCTGGATGTATTGAGTCCATCACAGTGCGAATGTCACGGGTAGATCTGCTGTTTTCAGGCAATTCATTCTTGGCTTTTTATCCCACCCGTTGTTGTTGCAAGTTAAGCTAGCAGTACTTGTCTCAGTGTCCGTGAGACGTTTGTGTAAGATTAGGTTAAACTAGAAGTTGTAATGCTGTATTAAGTGTTTGTATTTCTAATATGAACCGTAACAAGGCCAGAGCAGAACTCGTTATCCATACAAAAATTGATGGCCAGGTCAGTGTTCCCGTATTATTATGCAAGGGCAGAAGTTTGCATATGGTGTGGTGCCC | |||||||||
gi|86841349|gb|CI336378.1|CI336378 CI336378 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): AAACTAATGCAGGTTTCTATTGAAAGGATATCAAAATATTATAGTCTCTACATACTCTACAGAAAGAGCAAAGCTCTTGTTCGATCTTCCAGTAGGGATGTAAAAGTTATACATACAAAGTGTAGAAAGCTAATGATTATAATATAATATCTACTTTACAAACTTTTGTACTTCGGTGATGTCAACAAACTCATTGACTCCACTCGTCAGTAGATACCTGTCAAGAAGATCCTTTGCCGTGGATTTGCATCCACCAGGGATAGAAGACTGCATATTTATTGCTATGTTGGGGTTATGTACACTTTGGCGAATGTGGACCCACCCCAGTTCTCCCTTGTACTCATCAAAAAATTTAGCCCTGTACATGTACGCATCAACATCAAAAGGATCATCATTCGTGTCCACGAGGCATCCTTGGCTAACCGAGCAATCCCCACAGTCATCGA | |||||||||
gi|58602505|gb|CK013033.1|CK013033 29526rsicef_7871.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica G AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GGGCTGCAGGAATCGGCACGAGGAGGATGCAAGCTCATCAGGAAGGAAAAGTCATCCTTGGTTTGTTGACTATTATGACCGTAGATCTGCTGCAATTGCAATTGTATCACTCAACGGTAGACAATTGTTTGGCCAGCCAATAAAAGTCAATTGGGCATATGCAAGTACTCAAAGAGAGGATACATCAGGCCATTTTAATATTTTTGTTGGCGATCTTTGCCCGGAAGTAACAGATGCTGCTTTGTTTGCTTTTTTCGCTGGATTTACCAGTTGCTCAGATGCTAGGGTAATGTGGGATCAGAAAACTGGACGATCCAGAGGTTTTGGTTTTGTTTCTTTCAGAAATCAGCAGGACGCACAAAATGCCATAAATGAACTGAATGGGAAGTGGCTCGGCAACCGTCAAGTTCGTTGCAATTGGGCAACAAAGGGTGCTAATGCTGGTGAAGAGAAACAAAATACAGACTCCAAGGGTATGATAGAGTTGACAAATGGTTCATCAGAAGGTGGAAAGGATAATGCAAATGAAGATGGTCCTGAAAACAACCCACAGTACACGACTGTTTATGTTGGCAATCTTCCTCATGATGTCCACAGCAATGATGTGCACAGATTTTTCCAT | |||||||||
gi|86499768|gb|CI142401.1|CI142401 CI142401 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GGATTCATGTGGAATTTGCCTATCCAAAAAATGTTGTGCCACACTCGTTAGGCCACAGCTGACAACCCTCCCTATCACAAAAGATAATAAAAATGACAAAGGGGAAAAATACATCGATGTTTCTTTCTTTGCCTTTACAGTGTACAATAGTTTATTTCACTCGCCACGCTATATAAACTCTGCTGCCTCCAAGTTGGATGGCAAAAAGAATTGTCCTCTACACTACCTCAAAAAAATACTTCATGTTGGCAATAGTGGTTGCCTCTCATCAGTTCCAATCCTATGGCTGGCATCTTCAGCAGCGCCAGCAGTCATATTTACAAAAGAAGATTCAGATGACCGATGATTCTGTGTATCTTCCAACTCTAACAATTCAGGTGGTTTGTCATCTTTGGCTTTAGCGAGTGGAGAGAAGAACTGGTGCATTGAAATAAACACAAGTGATATGCCCAGTAGAAAATTAATGGTCAGGGTATGCCCCAAGAAGGCAGCAGAAGCTAGACCAGTAAAAATTGTTGCAACAGTTGACGAATACTTCTTCAAAA | |||||||||
gi|88741420|gb|CI764928.1|CI764928 CI764928 Oryza sativa (japonica cultivar-group) root of seedling gamma-irradiated (4min), aft AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GGTATTTGCCGTTCTCCGCGTCATCGGAGTGTCATTCTTGGCTGCTCCTTGCGGCAAGGTGAGGTGAGGCGAGCCATGGCTTCCCTCCCACTCCCTGCTCTTCACCACGAGCCCCTCCTCTCCCGCTCGCACCGCCGCCTTCCTCCCTCGCCACCGCCACCGCCACTCCCCTCTCGCCTCGCCGCGGCGCACCCCTCGGCCCCCTCTCCGTCTCCGCGCGACGATGAGCGCCTCCGACTCCGAGCCGAGGAGCTCCGGTCCTACGCCGCGGCACTCCAGGGCTGCGCCGCCAGCCGCGCGCTCCGCCGNGGGAAGGCCCTCCACGCGCGCCTGCTCCGGTCCGGGCCGCGCCCGGACGCGTTCCTGCACG | |||||||||
gi|33685460|gb|CF313699.1|CF313699 HD--01-O18.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA library (HD) Oryza sativa J AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GGACCTGACTGGACTGAAGGAGTAGAAAACAGCTTCCACTCCACGAAAACCCTCTGCCTCCTTCGCTCGCTGCACCCTCGTCTCGGCGATCCATCCATGGCTGCCAGGAAGTACTTCGTCGGCGGCAACTGGAAATGCAATGGGACAGGGGAGGACGTGAAGAAGATCGTCACCGTCCTCAACGAGGCCGAGGTGCCCTCCGAGGACGTCGTCGAGGTGGTGGTGAGCCCGCCGTTCGTGTTCCTGCCGCAGGTGAAGGGTTTGCTCCGGCCGGACTTCTCCGTCGCCGCGCAGAATTGTTGGGTGCGCAAGGGCGGCGCCTTCACTGGCGAGATCAGTGCCGAGATGTTGGTGAACCTGCAGGTGCCTTGGGTGATTCTGGGACACTCTGAGCGGAGAGCGCTGATGGGCGAATCAAGTGATTTTGTTGCTGACAAAATTGCGTACGCACTTTCCCAAGGTATCAAGGTAATTGCTTGCATTGGTGAGACCCTTGAACAGAGAGAAGCAGGAACAACGATGGAAGTTGTTGCAGCGCAAACTAAAGCTATTGCAGAGAAGATATCCGATTGGACCAATGTTGTTTTGGCATATGAACCAGTTTGGGCCATTGGAACCGGCAAGGTTGCAACCCCTGCTCAGGCTCANGAGGTATTCCTTCTAACATAGAGCAATTACATCACGATTAGCATGTTCCCTTCACATTTATCTGCCTCATAAA | |||||||||
gi|88298780|gb|CI565977.1|CI565977 CI565977 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): TCTGAACTTGAGAAAAAAGTTGTTAAATCAAGAAAGCCCTATCTTCATGAGTCTCGTCATCAACATGCTATGCGAAGGGCAAGAGGAACGGGTGGACGCTTCCTGAACACAAAGAAAAATGAAGATGGTGCTCCCAGTGAGAAAGCCGAACCAAACAAAGGAGAGCAGAACTCCGGGTATCGCCGGATCCCTCCTGACTTACAGCTCCTACAGAAGGAAACATGAAGTAGTGGCTCGAAACCTAGAACAGTGGCTTCTGTCCACCGGCATTCACTCTTGAGGGTGGATTCTTGCTCCAGAATTGTGCTGCCATCTTTCAAATGATCTTCATCGTGCAAGTAATTATATGTACATTCCTCTGAATGATCTATGCACCAATTGTTGATCCTGGCCAGGGTAATAATCTGGATGTATTGAGTCCATCAAAGTGCGAATGTCACGGGTAGATCTGCTGTTTTCAGGCACTTCATTCTTGGCTTTCTATCCCAACCGTTG | |||||||||
gi|163917818|gb|EG712144.1|EG712144 Os5MPREST3592 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-J4H03SA, mRNA AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GTATCGCCGGATCCCTCCTGACTTACAGCTCCTACAGAAGGAAACATGAAGTAGCGGCTCGAAACCTAGAACAGTGGCTTCTGTCCACCGGCATTCACTCTTGAGGGTGGATTCTTGCTCCAGAATTGTGCTGCCATCTTTCAAATGATCTTCATCGTGCAAAGTAATTATATGTACATTCCTCTGAATGATCTATGCACCAATTGTTGATCCTGGCAGGGTAATAATCTGGATGTATTGAGTCCATCACAGTGCGAATGTCACGGGTAGATCTGCTGTTTTCAGGCAATTCATTCTTGGCTTTCTATCCCACCCGTTGTTGTTGCAAGTTAAGCTAGCAGTACTTGTCTCAGTGTCCGTGAGACGTTTGTGTAAGATTAGGTTAAACTAGAAGTTGTAATGCTGTATTAAGTGTTTGTATTTCTAATATGAACCGTAACAAGGCCAGAGCAGAACTCGTTATACATACAAAAATTGATGGCCAGGACAGTGTTACCGTATTATT | |||||||||
gi|29623615|gb|CB628626.1|CB628626 OSIIEb04F02.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb04F02 5', mRNA sequence AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GCGATATTTGCTCCAAAGGTGGAGCGAATGTCGTACGCTGCCTCGCGCACCCCTCGGCCAAATAAGAGCGGCGGGCTGAGGGAAGATGTCGTTGATGGAGTTGATAGAGTTGCTAAGGGTGGGTGAACACCCGAGGCGGCTCACCCCTGGCTCTCTCTCACTCCCTACCGAGGGACTGCCCATGGCGCAAAGGGGCACCCCATGTGGCAGCTCAACCTTGGCTTGCTCGCGCTTCCCGCCGAGGGATTGCCCATGGCGCAAAGGGGCACCCATGGCGGCTGATTTGTTGCTCTGCATCCAATCCCTGGAGAAGGCTCCTCACATGGATGGTGGGCCTCTTCTGGGGCCTGGCCATGGAGGTCGCACCGTCCATAGGACCTGCGGGCAGCTGCTGGAGGGGCTTCGCACCCAGGCTGTCAACGTCCATACATAGGACCTGGACCTGCGGGCAGCTGCTGAAGGGGTCCTGTGGATGAATGATCCATGGTTGAGCGAGGCTGCCTCCAGGGATGCTGTTAGAGCCTTTTCTACTTCACCTTGCGCATGCAAGTCAACACATCTTGGATGCACTTTCTTTTGTACGATATCTTAAGTTGGACTCATGCACTGTTGATTCTTTGTTTCTACTACTAAAGTTTTGGAGGGAAATTATAGCTACATATTTACGATATCCTTATCCTTATCCTTATTGTGTCTGCTTTTGCCATTTCCCCTTGTTTTCAGATACAACGTGCTGGATTCTCAAGTCCAACGCCAATCCAAGCTCAGTCATGGCCAATTGCCTTGCAGTGGTCAGATGTTGTAGCTATTGCAAGACAGGATCTGGAAAACTCTGGGTATCTACTTCTGGATTATGCATATTAACGCTTGC | |||||||||
gi|86873250|gb|CI326239.1|CI326239 CI326239 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): AAACTAATGCAGGTTTCTATTGAAAGGATATCAAAATATTATAGTCTCTACATACTCTACAGAAAGAGCAAAGCTCTTGTTCGATCTTCCAGTAGGGATGTAAAAGTTATACATACAAAGTGTAGAAAGCTAATGATTATAATATAATATCTACTTTACAAACTTTTGTACTTCGGTGATGTCAACAAACTCATTGACTCCACTCGTCAGTAGATACCTGTCAAGAAGATCCTTTGCCATGGATTTGCATCCACCAGGGATAGAAGACTGCATATTTATTGCTATGTTGGGGTTATGTACACTTTGGCGAATGTGGACCCACCCCAGTTCTCCCTTGTACTCATCAAAAAATTTAGCCCTGTACATGTACGCATCAACATCAAAAGGATCATCATTCGTGTCCACGAGGCATCCTTGGCTAACCGAGCAATCCCCACAGTCATCGAGAAC | |||||||||
gi|112787103|gb|EE592052.1|EE592052 FU_REN01B2-A8.seq Rice mixture of leaf, root, panicle Oryza sativa Japonica Group cDNA, mRNA AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): TCGGTGCAAGGTTTGGCCGAGTTGGGGAAGCGCGGCAGAGTAGCAGAACCCTAGGTGGCGGCGGTGGTATCCCGTTCGCGGTGGCGGCGGCACATCCATAGCTGCCGACGGCAGCATCCCGTTCGCGGCGGCGGCGGCACATCCGTAGCTACCGACGGCGGCATCCCGTTCGCGGCGGCGGCGGCGCATCCGTAGCTGCCGACGGCGGCAACCCGTTCGCGGCGGCGGCGGCGCATCCTTGGTTCTCTGGGAAGAGCTATCGGTTTGCCTTTCTCCCCTTCGCGGCGGCGCCTCATCCATTCCTCTCGACACCGCCTTTTTCCCCTTGTCCAAATCGTCGCGGGACTTCGATGCATGCGTGCGTGTTCGGCCATGGATGAGTGAAGCTTACAATTTCGGGAAAGTACAAGAAGATGTTTGAGATGGATATGAAGTACAAGCACACAATTTGTTCTGGACGTTTGATAAATTTGTCATGCTCTTGTCCGTTCCTGTAGTATTGGAGGCATTTTATAATGGAGTCATTGGACTGTAATCAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|88739688|gb|CI763196.1|CI763196 CI763196 Oryza sativa (japonica cultivar-group) root of seedling gamma-irradiated (4min), aft AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GGTATTTGCCGTTCTCCGCGTCATCGGAGTGTCATTCTTGGCTGCTCCTTGCGGCAAGGTGAGGTGAGGCGAGCCATGGCTTCCCTCCCACTCCCTGCTCTTCACCACGAGCCCCTCCTCTCCCGCTCGCACCGCCGCCTTCCTCCCTCGCCACCGCCACCGCCACTCCCCTCTCGCCTCGCCGCGGCGCACCCCTCGGCCCCCTCTCCGTCTCCGCGCGACGATAAGCGCCTCCGACTCCGAGCCGAGGAGCTCCGGTCCTACGCCGCGGCACTCCAGGGCTGCGCCGCCAGCCGCGCGCTCCGCCGCGGGAAGGCCCTCCACGCGCGCCTGCTCCGGTCCGGGCCGCGCCCGGACGCGTTCCTGCA | |||||||||
gi|300215638|gb|HO088264.1|HO088264 Plate14-A1-T7promoter Subtracted cDNA library from Indica rice variety Suraksha Oryza sativa AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): AGCAGCAACAGGAGGAGGAGGCCGCATCCGGTGGCGCGAGCTCTGGCAATAGGACATGCCTTCAGAATGGCACCGGTAGCGCGCCTTCAGCTTCCTCTCCCTCTGAAATCGCGAGCGTCTCAACCAGCAGAGAATTCCTTGGTAACCATGAGCAGAGCCACTTCCCCTCAGCTGGCTTCCTTCCCACAATGAGCTTCAGAGCGCAGAATGGCGGAGATGGGAAGCTGGTCGCGAACGCCATTCACCAGCGCGTTTCCATGATGAGGTGAGGTGAAGAGGGGTGAAGTGGGTTCAGCTCAGCACCATCACTTTGGCTCTCTCCCTGCTGGTGGCAATTCATCCTTGGCTTATGAAAATACCTTATGGGAAAAAAAAAAGTAGTTTCATCCTCAAATGGACCAAACATGTGTGGCTCCATTTTAAGTTTTCCTGTAACTAAAAGCACTGCAATGATCAACTGACTGTTGGTTCTGTTTGTGGATGCTTATATCTGTACTTGCTGTATCTAATACTGAACTCTAAGTTGAAACACTGAAACTGATGGTCCCCGCCTCGTGC | |||||||||
gi|86883891|gb|CI328816.1|CI328816 CI328816 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): CTTTCTTAAACTAATGCAGGTTTCTATTGAAAGGATATCAAAATATTATAGTCTCTACATACTCTACAGAAAGAGCAAAGCTCTTGTTCGATCTTCCAGTAGGGATGTAAAAGTTATACATACAAAGTGTAGAAAGCTAATGATTATAATATAATATCTACTTTACAAACTTTTGTACTTCGGTGATGTCAACAAACTCATTGACTCCACTCGTCAGTAGATACCTGTCAAGAAGATCCTTTGCCATGGATTTGCATCCACCAGGGATAGAAGACTGCATATTTATTGCTATGTTGGGGTTATGTACACTTTGGCGAATGTGGACCCACCCCAGTTCTCCCTTGTACTCATCAAAAAATTTAGCCCTGTACATGTACGCATCAACATCAAAAGGATCATCATTCGTGTCCACGAGGCATCCTTGGCTAACCGAGCAATC | |||||||||
gi|58595884|gb|CK006412.1|CK006412 26578rsicef_1985.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica G AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): CCCCGGGCTGCAGGAATTCGGCACGAGGCTCCTCCATAGGATGCCGTCACAGGCTCACAGTGAGGCAGCGGCAGTTCATTCTTGGTGAGCTGCAGCAGAGCCACCACCTGTTGTCACTGGAGGGAGTTTAGAACGGCGTTGAATATTGATAGATATTTAGCATCTCACTAATGGATAATAAAACATGGCTTTGGAGAAAAAAATCCTCAGAAAGGACAATTTCAACGAAGAACAAAGCCAATATATCAGAGAGGGAACAGGAGAAAGAGAAGATTGCACGGTTAGAGAGATCCTTGCAATGCTTAAATGAACAGATTTCATTTGGTCAAGCTGA | |||||||||
gi|66915581|gb|CX102429.1|CX102429 RECm3421 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl AGCCAAGGATGACTT-GCCG EST sequence (targeted fragment marked with yellow): TTGAGGAGCAGTGGACGGCCTGGAATCCGGTGCGACCACGCGTCGCCCACGCGTCCGGGCTTATCTTCGTAAAGGCGCTGCATGTATACGACTGGAGGAGTATCAAACTGCAAAAGCGGCTCTTGAATTGGGTTACTCGTTCGCATCTGGTGACTCAAGGTTTACTCGCCTAATGAAGGAGTGTGATGAGCGCATTGCTGAGGAGCTTAGTGAAGTCCCTGTTAAGAAGGCTGAAGATGGAGCAGCTGCGCCCTCTGTTGCTTCTTTTGTTGAGGAAAAGGATGATGCTGCAAACATGGATAATACACCACCAATGGTAGAAGTGAAGCCAAAATACAGGCACGACTTCTACAACAGTGCTACAGAAGTTGTATTGACAATTTTTGCAAAGGGTGTTCCTGCTGAGAATGTTGTTGTTGATTTTGGTGAACAAATGTTAAGTGTGTCGATTGAAGTCCCTGGAGAGGAGCCGTACCATTTTCAGCCTCGTCTGTTTTCTAAGATCATCCCTGAGAAAAGCAGATACCAAGTGCTATCCACGAAGGTTGAAATAAGACTGGCTAAAGCTGAACAGATTACATGGACCTCACTTGATTANTGATAAAAACCAAAGGCTGTTCCACAAAAGATAATCCCTCCAGCTGAATCGGGCCAGAGGCCATCATATCCTTCCTCAAAATCCAAGAAAGACTGGGATAAACTGGAAGCTGAAGTTAAAAAGGAGGAGAACGAGGAGAAGCTTGAAGGCGATGCTGCATTGAACAAATTTTTCCCGTGACATCTACAGTGATGCTGATGAAGACATGCGACGAAGCAATGATGAACTCTTTTGTTGAATCTAACGGTACTGTTCTGTCGACCAATGGGAAGAATGTGGGTCCAAGAAGGTACACGGAAGCCCCCTGATGGGATGGCGTTAGGAATGGGGGTCCTAGAACCCGGTCGGGCATGTTGAAATTCGTATCGGCGGAATCATCCTTGGCTGGGATTCCGGCATCTTGGCACGTCGGAACGGGGGAGGCACCGGGGGGTTCCTATTTGAGCCCCTGTTAAG | |||||||||
gi|58652618|gb|CK041298.1|CK041298 42542rsiceh_0561.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GCACGAGGCGGAGACGGAGTCGAGCAGCAGCTGCGAGGCGTCCACGTGCTCGTCGTCGTCGTCGGCGTTCAACCCCGGGTCGTCTGGGGCGGCCTCGACCTCCTCCCTCTCCGCCTTCTCGTCGTCGGCCTCCACCGCGTCGTCGTCGGCCGCCGGCGACGAGCGGCGCGACATGGCGTGGCTGCTGGACGCCTTCGGCACCGCCACGATCGACCAGGTGGACTCCGCCTACCGCGAGGCCGGCGGCGACGCCTTCCTCGCGGCCGGCATCCTTGGCTCCTCGCCCGAAACGCAGCCCTCCCCGCCACCCCGGCCCCCGGATCTCTCGCCGAGGGCCGGATCTGGTGGCAGGAAGGCCAGCAGGAGGCCGAAGAAGGTAGCCGTGGCTGCGACCGGGATGGTTGCGGACGTGATCGGTAAGGGGTACACGCGAACTGCCACTTCGCCCGTAAACAAAACGAACGCGTGGAAGGGCAACGCTTGGAAGGACGGAAGTGGTGGCGACCGCAAGTATAGTGTTGAAGAGGCCG | |||||||||
gi|55439040|gb|CV732821.1|CV732821 FLO--07-H12.b1 Rice flower lambda phage cDNA library (FLO) Oryza sativa Japonica Group cDNA c AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): TGCGGNAATTCGCCCTTGGCACACTGNACATGGNACTGAAGGAGTATAAAAGTTTGGCTGAGTTGGGGAAGCGCGGCAGAGTAGCAGAACCCTAGGTGGCGGCGGTGGTATCCCGTTCGCGGCGGCGGCGGCGGCGGCGGCGCATCCTTGGTTCTCTGGGAAGAGCTGCAGAAGGCAAACCATCGGTTTGCCATTCTCCCCTTCGCGGCGGCGCCTCATCCATTCCTCTCGACACCGCCTTTTTCCCCTTGTCCAAATCGTCGCGGGACTTCGATGTATGCGTGCGTGTTCGGCCATGGATGAGTGAAGCTTACAATTTCAGGAAAGTACAAGAAGATGTTTGAGATGGATATGAAGTACAAGCACACAATTTGTTCTACACGTTTGATAAATTTGTCATGCTCTTGTCCGTTCCTGTAGTATTGGAGGCATTTTATAATGGAGTCATTGGACTGTAA | |||||||||
gi|58658530|gb|CK047210.1|CK047210 43476rsiceh_11517.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): ATCCCCGGGCTGAGGAATTCGGCACGAGGCTTACGGCGTCGGGGCTCCTCTCAAGCTCGCCGCAACGCGGCATGGGGCCCTCGCGCTGGGCGGTAGCCATCGCTGCAGTGGATGGAAGTCTTCAGTGTCTTGCCCTGTTCCTCAGGCTTGGATGGGCAGTTGCTCTTCTGTCGCAATGCGCCGTGTCGCCTCCGGCTCTCGATTGATTGTTCAGGCTTCAAACAGCGGGGGCTCAAGCGGGAAGGCATCGTTGGCTGATGCTAGCCTGCTTACTGAAGAGAGGATAACTGTTTTGGTGATTGGAGGTGGAGGAAGGGAGCACGCTCTCTGTTACGCCTTGAATCGCTCTCCGTCTTGTGATGCGGTCCTATGCGCCCCTGGGAACGCAGGTATTGCTCAATCTGGAGATGCAACCTGTATATCGGACTTAGACGTCTCCGATAGCGATGCCGTTATCGTGTTCTGCCGCAAGAGGGGAGTGGGAATGGTTGTAGTAGGTCCTGAAGCTCCTCTTGTTGCCGGTCTTGTGAATGACCTTGGGAAAGCTGAGATACCAGCATTTGGTCCTTCCTCAGAAGCTGCGGCTT | |||||||||
gi|44666756|gb|CR280190.1|CR280190 CR280190 Oryza sativa library (Han B) Oryza sativa cDNA clone p704a04p5, mRNA sequence AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): TACACAAAGCAGCAGCTGAAGCTTCAGATGGTGGACCCCAATGCTCGTCTCTGCGAACGGCGTTGTGTTCTCAAAGCACGAGCACAGCTTGTCGTCCAGTGATCTCCATCATCGTCGTGCGAAAGAGGGCGCTTGAGATCCTCGCCGTTGCTTGTCATGGCAAATCATCCTTGGCTTATGTGTGGTGCCCAGCAAAAAAAAATCTGACTTGAACCTGTGTGTAAACTGATGAGTATGGGTGGGTTTTGTGCAACTTGTAACTAGGGTGCTTGACATCTGTGTCTGTTGTTCCTCTGCCTCCTTAGTTTGGAGACGGTGCAGCTTCAGCTGGTACCAGTAATCTGATCATGCTAGACTTGTGACAAAAAAAAAAAAAAAAACCACACTTAAAACCATGTTCGGCCGCGCTCGGCGCCACGTCGAATCCTAAAACTCCGAGCAAAGCTTAATGCATTGCTGGCCTGCAATATCGGAGGCTCACCTTTTGGCCAATATCG | |||||||||
gi|33689972|gb|CF318211.1|CF318211 HD--08-D24.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA library (HD) Oryza sativa J AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): ACTCCACGAAAACCCTATGCCCCCTTCGCTCGCTGCACCCTCGTCTCGGCGATCCATCCATGGCTGCCAGGAAGTTCTTCGTCGGCGGCAACTGGAAATGCAATGGGACAGGGGAGGACGTGAAGAAGATCGTCACCGTCCTCAACTTTTTTTAGGTGCCCTCCGAGGACGTCGTCGAGGTGGTGGTGAGTCCGTCGTTCGTGTTCCTGCCGCAGGTGAAGGGTTTGCTCCGGCCGGACTTCTCCGTCGCCGCGCAGAATTGCTGGGTGCGCAAGGGCGGCGCCTTCACTGGCGAGATCAGTGCCGAGATGTTGGTGAACCTGCAGGTGCCTTGGGTGATTCTGGGACACTCTGAGCGGAGAGCGCTGATGGGCGAATCAAGTGATTTTGTTGCTGACAAAATTGCGTACGCACTTTCCCAAGGTATCAAGGTAATTGCTTGCATTGGTGAGACCCTTGAACAGAGAGAAGCAGGAACAACGATGGAAGTTGTTGCAGCGCANACTAAAGCTATTGCAGAGAAGATATCCGATTGGACCAATGTTGTTTTGGCATATGAACCAGTTTGGGCCATTGGAACCGGCAGGTTGCAACCCCTGCTC | |||||||||
gi|89191452|gb|CI393305.1|CI393305 CI393305 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GCATATAACCCAAAGAACATTGTATATAAATAACCATAAAGACTGTAAAACTACTGGTTCAAAATAGCATTACATATAGCAAAGGTACATCCAAATCATTCGGTATAAACCGCAAGATGGAACAACGGCCCATATGTCTTCTTAACTTACGCTCAAATCAAAAGTTTATATATAACTCTCAAGACCAGCTCCAAACTTAAAGCGACCAGACAGGTAGCCAAACACGGTAACAAGGTATTCTAGTTCTTGGGGCCAATATCCTTCAGAGCGCAGATCTGCTCCTCACCCATGGCAGACATCACGGTAACAATCAGATCCTTCCCCTCGGCGAATCCATCCTTGATCTGAGTAAGCAGAGCCTCATCACTAGGGAGCCTCAGGTCATCCTTAGCTGCCTCCACTTTCAGTCAGGAGGCTGACAAATCCATCTTCAGAAATGTCAATCAGCTGATAATCAGTACGG | |||||||||
gi|29659585|gb|CB655860.1|CB655860 OSJNEc09K06.r OSJNEc Oryza sativa Japonica Group cDNA clone OSJNEc09K06 3', mRNA sequence AGCCAAGGATGACTTGCCG EST sequence (targeted fragment marked with yellow): GTCATGAAAAGGTTACATTCTGTTGGGAAAATGGGAGAGCGGTATGATCCATGCACTGAAAAGCATTCAACTGTATACTTCAATCTGGCTGAGGTGCAAAAGGCACTTCATGTTAGTCCGATCATCAACAAATCTAAATGGGAAACCTGCAGTGATGTTGTTAACACTAACTGGAAGGACTGCGAAAGATCTGTGCTGCATATCTATCATGAACTTATACAGTATGGTCTTCGTATATGGGTGTTCAGTGGAGATACAGATGCAGTGCTTCCAGTAACATCAACTAGATACAGCATCAATGCCCTCAAACTTCCAACGGTAACCCCTTGGAATGCTTGGTATGACGATGATGGTGAGGTTGGTGGCTGGACTCAAGGGTACAAGGGACTCAACTTCGTGACTGTGAGGGGCGCAGGTCATGAGGTTCCTTTGCATAGGCCCAAACAGGCTCTAATTCTCATCAAATCATTCTTGGCTGGGAGCCCAATGCCCAGTGTTCAAGATTTTTACAGTGATGTGTAACATATTTTGGCTACAATTATATATTACCAAGATCACAAAAGGTAACTCAGACGGGGTTGCTAGTATCACATGGAACTCGTACCATATATTGGTAACAATTCTTCCCTAAATAAAATAGGGAACAAAATCATGAAATAGTTTTCGTGCCACGAATCGACACTGTCTGTTGATATTGATATGAACCTAAGACAAAAGTATTAATCAAGGGTGAACGTTCACATTGTTGTCGTACAGGATGTGTATAACATTGTTGTGTATAACAAAACTATTAATGAAGGGTGAATGTTCACATTGTTGTCGAAAAAAAAAAAAAGGAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTGTC | |||||||||