| mature miRNA: AGCCAAGGATGACTTGCCT species: Festuca arundinacea database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|74433023|gb|DT689198.1|DT689198 s13dFA34B11FM093_500156 Tall fescue, Festuca arundinacea Schreb, Floral meristem Festuca arun AGCCAAGGATGACTTGCCT EST sequence (targeted fragment marked with yellow): GCACGAGGCAGAGTTAAGTGGCACCAGGTGCTACTTTGCTATGAAAGTGATGGACAAGGCATCCTTGGCCAGTAGGAAGAAGTTGAATCGGGCTCAAACTGAGAGGGAGATTCTACAGCTTCTGGATCATCCGTTCCTACCAACCCTGTATACGCATTTTGAGACCGACAGGTTCTCGTGCTTGGTAATGGAATTTTGTCCGGGTGGTGACTTGCACACTCTGCGACAGAAACAGCCAGGAAAACATTTCTCTGAGTATGCAGCAAGGTTTTATGCTGCTGAAGTTCTTCTAGCTATTGAGTACCTACACATGCTGGGAGTGGTGTACAGGGACCTGAAGCCAGAAAATGTTCTGGTGCGTGATGATGGCCACATAATGCTTTCAGATTTTGATCTCTCCCTGAGATGTGCATTCTCACCTACACTAATCAGAACATCAGCTTTTGATTCTGATCCCAGAAGAGCGGGTGGTTCGTTCTGTGTACAACCTACTTGCATGGAACCTACCTCAGCATGTATTCAGCCAGTTTGTTTCATGCCCAAATTGTTTGGTCAGAAGAGCAAGAA | |||||||||
gi|74453837|gb|DT710012.1|DT710012 s13dFA59D11ST094_401673 Tall fescue, Festuca arundinacea Schreb, stems Festuca arundinacea cD AGCCAAGGATGACTTGCCT EST sequence (targeted fragment marked with yellow): GGCACGAGGGAGAAGTCCACTGTTCCAGTCAAGACTGCTGAGGCAATTGAGAAGATCTTGACCCACAACAGCAACGGCATCAACTTCCAGATCCTCTCCAACCCAGAGTTCCTTGCTGAGGGTACTGCCATCAAGGACCTGTTTAACCCTGACCGTGTTCTTATTGGAGGACGCGAGACCCCGGAGGGCCAAAAGGCTGTTCAGACGCTGAAGGCTGTGTATGGTCATTGGGTTCCTGAGGATCAGATCCTGACAACCAACTTATGGTCTGCAGAGCTGTCTAAGCTTGCAGCCAATGCATTCTTGGCTCAGAGGATCTCCTCCGTGAATGCCATGTCAGCCCTCTGCGAGGCCACTGGTGCAAATGTTTCTGAGGTATCTTATGCCGTGGGCAAGGACTCCAGGATCGGCCCAAAGTTTCTGAATGCCAGTGTTGGATTTGGGGGCTCTTGCTTCCAGAAGGATATTCTGAACTTGGTTTACATCTGTGAGTGCAATGGCCTCCCTGAAGTTGCCAACTACTGGAAGCAGGTCATCAAGAATCATGACTACCAGAAGAGCCGGTTCGTGAACCGTGTTGTT | |||||||||
gi|74429622|gb|DT685797.1|DT685797 s13dFA20A02FM005_158096 Tall fescue, Festuca arundinacea Schreb, Floral meristem Festuca arun AGCCAAGGATGACTTGCCT EST sequence (targeted fragment marked with yellow): GCACGAGGTACAGAAGCTGGCATTATCATCAAAAGGAATCAGACCAAGATAAGCGCGAAAGCTCAGCGCAAGGTTGCAAGGGAGATCAAAACAGCGCGTGCACTGGGGCTAATGCCTTTCACGACGATGGGCAAGAGGCCATTCATCTTTGGCAGAAGCGTGGAGGAGGACCCTTCAGAGGAGGAATATGGGTATGACTTCGTCGAGCAGAAGGACGCTGCGCCTGAAGACGAAGCTGGTGATGCTGTGCCTGATGTGGAGGCGGCTTAGACGCTCTAGGGCCTTTGTTTTCTGCAACCCCTCCCTTTCTTGTGTTTCCTCTCACTTGGCGCGTACCTGACGCTGCCTTTTGCTTGCTTGGAGAATAGACCAGCTGCACTTAAACTGTAGTAGCATCCAATAAACTGTAGTAGCTTGGAGAGCAGACCAGAGTCTAGGCTGGAGGGCATGTGACTTATATGTATGAGATCTAGCATTTGTCTCTGCGCTAGTAAGTTCAGTTCTCTCTTTNC | |||||||||
gi|257173815|gb|GT033654.1|GT033654 CLS_cLiFproots_13a2_1_a04cLibkit5LD_A02 CLS_cLiFproots_plant Festuca arundinacea cDNA clone AGCCAAGGATGACTTGCCT EST sequence (targeted fragment marked with yellow): AGAGGCGGGGACAGCGCTCCTGATTGCGGGTACACCAGGGACTGGTAAGACAGCCTTGGCTCTGGCTGTCTCTCAGGAGCTGGGCACTCGGGTCCCATTCTGTCCCATTGTCGGATCCGAGGTTTATTCGGCAGAGGTGAAGAAGACCGAGGTTCTGATGGAGAATTTTCGGCGCTCGATCGGCCTTCGCATCAAGGAGAACAAGGAGGTCTGGGAGGGTGAAGTCACGAATGTGACTCCGGTTGAGGCTGAAAGCAGCCTCAGTGGCTATGGCAGGACAATCTCCCACTGCATGATTGGGCTCAAAACCACCAAGGGTACCAAGCAGCTCAAGCTGGATCCGTCGATCTACGAAAGCTTGCAGAAAGAGAAGGTTAATGTCGGGGATGTGATCTATATCGAGGCGAACTCGGGTTCGGTGAAGCGTGTCGGACGATGTGATGAATACGCTTCGGAATTCGATCTGGAAGCGGAGGAATACGTTGCACTGCCCAAAGGTGATGTCCATAAGAAGAAGGAAGTCGTGCAAGACGTCACGTTGCATGATCTTGATGTGGCCAATGCGAAACCGCAGGGTGGTCAAGACATCATGTCAATGATGGGTCAGATGATCAAGCCCAAGAAGACGGAGATCACTGAGAAACTTCGTCTGGAGATCAACAAGGTCGTGAACCGATATATCGATCAAGGAGTCGCCGAACTTGTTCCTGGTGTTCTCTTCATTGATGAAGTGCACATGCTCGATCTGGAATGTTTCGCGTTCCTGAACCGAGCTCTGGAATCGCCTTTGGCTCCAATCGTAGTTCTGGCCACAAATCGTGGAAATCTGCAAGATTCGTGGCACAGATATTACGTCACCCCATGGGATCCCTGTCGATCTCCTGGACAGGTTGATCATCATCAAAACTAATCAGTATCAACCCTCCGCAAATTAAACAGATCCTGGCTATCCGAGCTGAAGTTGAGGGCATCGATGTCCAAGAGGAC | |||||||||
gi|74456442|gb|DT712617.1|DT712617 s13dFA09G08SD068_503958 Tall fescue, Festuca arundinacea Schreb, young seedlings Festuca arun AGCCAAGGATGACTTGCCT EST sequence (targeted fragment marked with yellow): AGTTGCTCAAGGGCCACAATTTTCTCATTTCACTCGTATGAGGGTAAAAGACAAATTACAATATCCAAGATTGCATAACTTACTTTCTTTCAAAATTAATGTTCTTCTAATGAATGGGAAATCTCTACTGCTGTTCCCAGAGGAAAATTTGAATACAATCTCGGTAATTTGACTAATAACTCTCCAAACACCGCATTATCTAAAGCTCGTCCTTCTTCTGGGAAGCATCCTTGCTAATTTCCTCCACCTTCTCGTCGGTAGACACCTGCTGCGGCTTAACAGCAAAGTCATCCTTGGTCTCCACGTCGCTGCCAGTATCGATGTCTGCATCATCATCATCCTCCTCATCATCTGACGCATCGTCTTTTTCATCATCTGTGGCGTTCGCGGATTCCTCCTCGAGCTTCTTCTTCTCAGCCTCGTCAAAGGCAGCCTTCTCAGCATCTTTGTGCTTGCCCCAGGTCTCCTCTGCCAACTTCTTCGCGTACTCAGCGTCATCC | |||||||||
gi|257178801|gb|GT039256.1|GT039256 CLS_cLiFproots_28a1_1_i01cLibkit5LD_E01 CLS_cLiFproots_plant Festuca arundinacea cDNA clone AGCCAAGGATGACTTGCCT EST sequence (targeted fragment marked with yellow): TGATGCTGCTCTATGTGACTACAAAGTTAACAAATTCTATTGCTATTGCAACACGCGGAGGATGTCCTTTCACTGCCAAAGCAGAAAATGCACAGGCGGCTGGTGCAGCCGGTTTACTGGTTATAAATGACAGTGAAGAGCTTTATGCGATGGTTTGCAATGAGAATGACACTTCGATTAATGTGACGATCCCTGTCCTAATGATACCACAGTCAGCAGGGAAGAATCTGAAGGATTTGTTGGATCAGGGAACAAGGGTTGAGCTCCAGTTGTATTCGCCAATTCGACCAGTTGTGGAACTTTCAGCAGGCTTCTTATTGATAATGGCTGTAGGAACAATAGTCTGCGCCTCACTTTGGAGTGAATTCGTTGCATGTGAGCAGGTTGATGAGCATTACAATCAGCTCACACGGCAGGAAGGACCTAATTCTGGAACAAACCACAGACAAGAAAAAGAAATATTTGAAATCAGCGCCAAGGGAGCTGCTGTTTTTATTGTAGTAGCTTCGGTTTTCCTTCTCCTCCTGTTCTACTTAATGTCGTCTTGGGTCACCTGGGTGCTGATCGTGTTCTTCTGCATTGGTGGTATTGAGGGTATGCATAGTTGCTTGGTGACAATATTCTCTAGGATTTTCAAGGAGTGGGGACAAAAAACTGTAGAAGTCCCCTTTCTTGGGGAAGTCTTGACCTTGTCTGTTGGAATACTACCGTTTTGTACGGTCTTTGCCATTCTATGGATCGTTTATCGGCGTTCTTCATTTGCTTGGATAGGCCAAGACATCCTTGGTTTCTGCTTGATGATAACTGTGCTTCAGATGGCGCGCTTACCTAATATCAGGGTTGCATCAGCTCTTCTTAGTGCTGCATTTGTGTATGACATCTTCTGGGTCTTCATTTCTCCTCTTATATTCCATGAGAGTGTCATGATTGCAGTTGCTAGTGGTGACAGCTCAGGGAAGCAATTCCAATGCTCCTAAGGATACCTCGTTTCTTTGATCCATGGGGGTGGCTATGACATGATTGGCTTTGGTGACATAATTTTCCCTGGAATTGCTTGTTGCATTC | |||||||||
gi|257182228|gb|GT044309.1|GT044309 CLS_cLiFproots_55a1_1_m19cLibkit5LD_G10 CLS_cLiFproots_plant Festuca arundinacea cDNA clone AGCCAAGGATGACTTGCCT EST sequence (targeted fragment marked with yellow): AAGCGCAGCTCGCATGATTGCCGATGTGGCCAAATCCGACAAGATCGTGGTCGAGAAGTCCACTGTTCCAGTCAAGACTGCTGAGGCAATTGAGAAGATCTTGACCCACAACAGCAACGGCATCAACTTCCAGATCCTCTCCAACCCAGAGTTCCTTGCCGAGGGTACTGCCATCAAGGACCTGTTTAACCCTGACCGTGTTCTTATTGGAGGACGCGAGACCCCGGAAGGCCAAAAGGCTGTTCAGACGCTCAAGGCTGTGTATGCTCATTGGGTTCCTGAGGATCAGATCCTGACAACCAACCTATGGTCTGCAGAGCTGTCTAAGCTTGCAGCCAATGCATTCTTGGCTCAGAGGATCTCCTCTGTGAACGCCATGTCAGCCCTGTGTGAGGCCACTGGTGCAAATGTTTCTGAGGTATCTTATGCCGTGGGCAAGGACTCTAGGATCGGCCCAAAGTTTCTGAATGCCAGTGTTGGATTTGGGGGCTCTTGCTTCCAGAAGGATATTCTGAACCTGGTTTACATCTGTGAGTGCAATGGCCTCCCTGAAGTTGCCAACTACTGGAAGCAGGTCATCAAGATCAATGACTACCAGAAGAGCCGGTTCGTGAATCGTGTTGTTTCCTCTATGTTCAACACTGTTGCGAACAAGAAGATTGCAGTGCTTGGCTTTGCATTCAAGAAGGACACTGGTGACACTAGGGAGACTCCTGCTATTGATGTCTGCAAGGGTCTGCTTGGTGACAAGGCTAAGATCAGCATTTATGATCCTCAGGTGACTGAAGATCAAATCCAGCGTGACCTTGCGATGAGCAAATTTGACTGGGACCACCCTGTCCACCTTCAGCCAATGAGCCCCACGACCACAAAACAAGTCTCAGTTACCTGGGATGCATATGAGGCTACCAAGGATGCCCACGGTATCTGCATCTTGACCGAGTGGGATGAATTCAAGACACTTGACTACAAAAGATCTACGACAGCATGCAGAGGCTGCC | |||||||||