| mature miRNA: AGCCAAGGATGACTTGCCT species: Tamarix hispida database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|118455276|gb|EH051045.1|EH051045 THL24h-412 cDNA library of Tamarix hispida leaves at different stress times Tamarix hispida AGCCAAGGATGACTTGCCT EST sequence (targeted fragment marked with yellow): GGGGTGAAAATATGGAATTTGACCAACTGTAAACTCAGGTCAACCTTGGCTGGACACTCTGGTTATGTTAACACGGTTGCTGTCTCACCTGATGGTTCACTGTGTGCTAGTGGTGGGAAAGATGGCGTGATTCTTTTGTGGGATTTGGCCGAAGGCAAAAGGTTGTACTCTCTGGAATCAGGCTCTATTATCCATTCTCTTTGCTTCAGTCCAAACAGATACTGGCTCTGTGCTGCTACCGAGAGTGGAATTAAGATTTGGGACTTGGAGAGTAAGAGTATTGTCGAGGACTTGAAGGTTGATCTCAAATCTGAGGCTGATCACGCTGAAGGAGCTGGTGCAACCAGCACCAAGAAGAAGGTAATCTACTGTACAAGTTTGAACTGGAGTGCTGATGGAAGCACATTATTCAGTGGGTACACCGATGGTGTCATCAGAGTTTATGG | |||||||||
gi|117890684|gb|EG971889.1|EG971889 THCK-834 Tamarix hispida roots Tamarix hispida cDNA clone ck-37E10.abd, mRNA sequence AGCCAAGGATGACTTGCCT EST sequence (targeted fragment marked with yellow): GTGAGCGAGGAAGGATTCTCACTTTGTTCAGGACGTTGTTCTTTCCTCTGACGGTCAGTTCGCTCTCTCCGGTAGTTGGGATGGTGAACTCCGCCTATGGGACCTTGCTACTGGTAATACTGCTCGCCACTTTGTTGGCCACACTAAGGACGTACTTTCTGTTGCTTTCTCCATTGATAATCGTCAAATCGTTTCGGCATCTCGTGATCGTTCTATCAAGCTCTGGAATACCCTGGGTGAGTGCAAGTACACTATTCAAGACAATGATGGCCACAGCGACTGGGTCAGCTGCGTCCGCTTCAGTCCAAGCAACCTCCAGACAACTATTGTATCATCTTCCTGGGACAAGACTGTGAAAATATGGAATTTGACCAACTGTAAACTCAGGTCAACCTTGGCTGGACACTCTGG | |||||||||
gi|117892315|gb|EG973520.1|EG973520 THCK-2303 Tamarix hispida roots Tamarix hispida cDNA clone 060817-ck-33E07.abd, mRNA sequenc AGCCAAGGATGACTTGCCT EST sequence (targeted fragment marked with yellow): GGGGGGTGAGTGCAAGTACACTATTCAAGACAATGATGGCCACAGCGACTGGGTCAGCTGCGTCCGCTTCAGTCCAAGCAACCTCCAGCCAACTATTGTTTCATCTTCCTGGGACAAGACTGTGAAAATATGGAATTTGACCAACTGTAAACTCAGGTCAACCTTGGCTGGACACTCTGGTTATGTTAACACGGTTGCTGTCTCACCTGATGGTTCACTGTGTGCTAGTGGTGGGAAAGATGGCGTGATTCTTTTGTGGGATTTGGCCGAAGGCAAAAGGTTGTACTCTCTGGAATCAGGCTCTATTATCCATTCTCTTTGCTTCAGTCCAAACAGATACTGGCTCTGTGCTGCTACCGAGAGTGGAATTAAGATTTGGGACTTGGAGAGTAAGAGTATTGTCGAGGACTTGAAGGTTGATCTCAAATCTGAGGCTGATCACGCTGAAGGAGCTGGTGCAACCAGCACCAAGAAGAAGGTAATCTACTGTACAAGTTTGAACTGGAGTGCTGATGGAAGCC | |||||||||