miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: AGCCAGGGATGACTTGCCGA
species: Nicotiana benthamiana
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|227577148|gb|GO612356.1|GO612356 NBREL4_JP_006_H08_13NOV2004_050 NBREL4 Nicotiana benthamiana cDNA, mRNA sequence 

AGCCAGGGATGACTTGCCGA
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TCGGTTCCTACTAAAAAGCT

EST sequence (targeted fragment marked with yellow):
AGTGCAGATATAATCTGGTATTAGCCATACTATATACATAAGAAAATAAAAAGAACATCTTGCTGCTAGTCCAAATATTCGAAAAATCATCCTTGGCTTTTCCCTGCAAAAGATTCTTGACCAGATGTAGCATCAACGAGTTTGGTATACTTGCGGTGACGCCTCTCTCTTGCATATA