| mature miRNA: AGTGGTAGAAGATCCAGCACC species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|52390324|gb|CV233604.1|CV233604 WS01211.B21_K13 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01211_K13 3', mRNA sequence AGTGGTAGAAGATCCAGCACC EST sequence (targeted fragment marked with yellow): GGTTTTCATAGTTTAAGTAAACTAAGAACAGTATCGCAGAGTGCTGCAGCTACTGATAAGATTGCTGTTATCGAGTTGTTCTTTCCTTCCGTGTTCAGAGCTATAATATCATTGCATCCAGCTGGTTCCATTGACCCAGATGCAGTAGCTTTCTTTTCACCCGATGAGGGAGGCAGCTATATACATGCAAGAGGTTTTTCAGTTCATCATGTATTCAGAAAGATCTCGGAGCATGCTGCTATGGCCTTGCAGCATTTTCTTGGGGTCAGCTCTAGAACAGCCTTATATTCTATCGTGCACTGGATATGCTGCTACCAGACACTATTTACCAAAGTTTGCAGTAAGTGTGGAAAGCTACTGGCAATGGACCGAAAATCAATGTTGCTACTACCCCCAGTTTATCGTCCTTATCTACACTTTTCTACCTTGCAAATTGCATCAACTCAGACCAATTCCTCGGCCAAGGACCACGGTTTGGAGAACCTGGGGGCATTTCATATTGGTTGCTTTACAGAGGAGCTGTAGCTTCTGCCACTGACATTTCTACTCAAAAGATACCGTAGCTGATTCGAGGAGGTAGAAAGAGTTCTTCTACTTGGTGTGGGATCTTTATTTGTCAATGATCATGTAAGATTTTTCTTCACTCAAATGGTAAAAGAAATATGTTAGTATCATGTTTATGTGCCCTAAAAAAAAAAAAAAAA | |||||||||