| mature miRNA: AGTGTTTGGTTGATGAGAACT species: Picea glauca database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|211867396|gb|CO472883.2|CO472883 GQ00411.B3_M22 GQ004: Non-lignified secondary xylem from mature trees Picea glauca cDNA clon AGTGTTTGGTTGATGAGAACT EST sequence (targeted fragment marked with yellow): CAGGAAATCGGCATACCCACGGTGGCGGCGTCTTCTTTATTGCATGCTTTAGCGCCGCAGAGGCGCGGGTTCGAGTACGCCCGCAAGGAGCAAGGTGCAGCGGCAGCAGAGTTATGGTGGATGAGCACAGAAGATTGGGGAATTGCGAAGAGAAGAGTACCTAGATGATGAAATCCTTGCAATTTCTGGCCGCGGTCATGCTGGGCGCGGTGCTGCTGTTAACGCTCAGCACCGAGCTCACATACAGAATGGCCGTGCACAGTATTGTGAACCGAACGCTCATTCCAACGTTACTTATATATAAGGACCTGGTGTCGGCCCGCCCCAGCCACCGGCGACCCGCGGTGAGTTCCATTAACCAGACACTGTTACGCTACGCTGAGATTGAGTTAGGCGATCCGGAAGAGCGCCAGAGGATAAACCGTCTGTTGGACGGCAGCATCGGCAGCGGCAGCCGCTCGATCTCCTCGTGGCGCAGGGCAATAGAGCACGACGACCTGCTCCAACTCCCGCGGCCCCGAGGCGCGGCCAGCCAGAGGGAGAGACAGAGGCAGAGACATGGTATCCCGTTCCACCTCTTCCACCCGCGGTATACCCCCTACTGGACCGAATTCCGCCGGGTGTTGAAATATTGGGTTCAGAACAAGCGATTCCATCCGCGGGTCATGGCGGAGCTCGGTGATCTCGTGAAAACCCCCTTGGATCGCCACTACAACGCCACCAGGACTGTGAACATCCGACCCGGGCAACCCTACCGGAGCTGCGCCGTGGTGGGTAACAGCGGCATCCTGCTGCAGAAAACCCAAGGACCGCTGATCGATTCCCACGAGATGGTAATCCGACTAAACAACGCCCGCATC | |||||||||
gi|238891644|gb|GR223136.1|GR223136 GQ03811.B7P3_A19 GQ038 - Stem - Active growth Picea glauca cDNA clone GQ03811_A19 5', mRNA s AGTGTTTGGTTGATGAGAACT EST sequence (targeted fragment marked with yellow): GTGCCAGCTAAATCATTGGTTAGTGAGGTTCGGTGTCAGAACCGAGGACTTCCACAAAGGAAAAAGCTTGAAGAACCTATCAAAGTAAATAGAAAGAGGTCTAGGCCTGGTGAAAGTTCTAGGCCAAGGCCAAAAGATCGGCAGCAGGTACAAGATCGTGTAAAAGAGCTACGGGACATTGTCCCAAATGGAGCCAAGTGCAGTATTGATGCTTTACTTGAACGCACCATCAAGCACATGGTTTTCTTACAGAGTGTGTCCAAGTATGCTGATAAGCTAAAACAAAGTGGTGAATCAAAGGTGCTTGATAAGGAAGGTGGTATGCTTGCAACAAATAACGTGGAAGGTGGTGCTACCTGGGCATTTGAATTGGGTGGTTCGACAGTACAGTGTCCTCTTATCGTGGAGAATTTGAATCAGCCCCGTCAAATGCTTGTAGAGATGTTGTGTGAAGAACGGGGGCTATTTCTTGAAATAGCTGACATCATCCGAGGCTTGGGTCTCACAATCTTAAAGGGTATCATGGAGGTTCGCAATGATAAGATCTGGGCACACTTTATTGTTGAGGCAAACAGGGATGTACACAGGGTTGATATTTTATGGTCACTTATGCAGTTGTTACAACCAAACACTAAGAGTACTACAAATACAATTAATCAGTCTTTCTTAGTCAGGAGTCAGGGCATAGACAATGTTTCTCAGACATATGATGCATTCCAGCTATCCCCAATGTCTACTTTATTGACAAATGGTGCTGTGAGCGGGTCTTAAAATCTTTGCCTGCCATGACTGGCATCAGTGCATTATTACTGCCTTTATAGTGTAATGTAAGTAATATAAGTTGTTAAAAGCTGCTCT | |||||||||