miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: ATACTCCATCCGTCCCATAAT
species: Artemisia annua
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|159765259|gb|EY053026.1|EY053026 CATC4073.fwd CATC Artemisia annua, Tanzanian, from Sandeman Seeds, 0.5-1kb Artemisia annua c

ATACTCCATCCGTCCCATAAT
|||||||||||||||||| |
AATGAGGTAGGCAGGGTATAA

EST sequence (targeted fragment marked with yellow):
TAGACTATTTTAAATTGACACACGACATGGTCAGATTCTTCGATTATGCTCAACTCGGGTTTTAGGTCAACAAGGAGTAGGGGGTTTTATGATACTCATTTCACATCTACTTCATTATGATTCAATCTTAGACAATCTTTGTTTTTTTTAAGCAAGTTTATTGTTATTGAAACAAGTAGTTTGAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTCAAACTGATAATTTGGTTCGGTAATAGATCATTTAATCTATCTAACAAAAGGGTCACAAAACTTCTAAAACTGCTTATATGCGCGCTTATCATAAGCAGATAAGCAGCTTTATAAACATCTACATGAATTAAATATTTGAAGTGGGTTTGGGATATATTCTCTCCGTCCCATATTAAGTGCCCACTTTTAAAATGCACAAAGTTTTAGAATTCCACTAACTACACTCTCCACCAATCAAATATCATTTTTACCCACTAATGTCTCATCTCATTGGCTGGAAGACAATATGGACACTTAATTTGGGACATCACAAGATTCTATTGTGGACACTTAATATGGGACGGATGGAGTAATAGTTTTAGCTTTTAAGATTTTCATTTTCG



gi|159767836|gb|EY069685.1|EY069685 CATG2538.fwd CATG Artemisia annua, Tanzanian, from Sandeman Seeds, 2+kb Artemisia annua cDNA

ATACTCCATCCGTCCCATAAT
|||||||| |||.||||| |
TATGAGGTCGGCGGGGTACTT

EST sequence (targeted fragment marked with yellow):
CTTCTCTTTGTTCCTATGAACAAAATTGTTCCATTATTACCAACAGAATAGAACAAATATGAACCCTTACGTTGAAATAAGCCACTAAATAGGGGGGTCCATAACATAGTCATAGTATAGTCTTTTCCAATGCAATAAAGTTACGTAGTGTCTTTTTTCTTTCATAAAGGGGTATTTCCATGGGTTTGCCTTGGTATCGTGTTCATACCGTTGTATTGAATGATCCCGGACGGTTGCTTGCTGTTCATATAATGCATACAGCTTTGGTTTCTGGTTGGGCCGGTTCGATGGCCCTGTATGAATTAGCAGTTTTTGATCCTTCTGACCCTGTTCTTGATCCAATGTGGAGACAGGGTATGTTCGTTATACCCTTCATGACTCGTTTAGGAATAACCAATTCATGGGGCGGCTGGAGTATCACGGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGGTGTGGCTGGAGCCCATATTGTGTTTTCTGGGTTGTGCTTTTTGGCAGCTATTTGGCATTGGGTGTATTGGGATTTAGAAATTTTTAGTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCCCAAGATCTTTGGAATACATTTATTTCTTGCAGGTGTGGCTTGCTTTGGTTTTGGTGCATTTCATGTAACAGGCTTATATGGTCCTGGCATATGGGTG



gi|159712311|gb|EY108241.1|EY108241 CAZI566.rev CAZI Artemisia annua normalized leaf library Artemisia annua cDNA clone CAZI566

ATACTCCATCCGTCCCATAAT
|||||||.|||||| | |||
AATGAGGTGGGCAGGATTTTA

EST sequence (targeted fragment marked with yellow):
ATCTAATATCAAATCATACAACAAAAATAGTTACCTAACACAATCCATGAGTCATAGTGTAAGTATCTCATCCTTAGTACATCCTTGTTAAAAGTCTATTTTTTACTATGTACTAAAATTATTCTCCAACTTATTATTTAGTACTATGTCACATATAATTATTGAGATGTAATTTGCTCAAGTTTCTCATATTAGTGTTAAAATCTAAACTGTTATTTTAGGACGGGTGGAGTAATATATACTAGAATCCTAATATCGGATTTGTAAATTTCAGGTATCTTCGTCTTCAATCGATGCGGGAATCGTACCCGAAGGCAACTCGATGTCCGAAATATCTCATCCATTTGCTCTACACGCCAACAACAATAGCGACTTATCTGCAAGTCAAGCACCTACACAACTATCCGGTTCGGACCGAGAAGCTAGGGTCATGAGGTACCGAGAAAAAAGGAAAAACAGAAAGTTCGAGAAAACCATCCGATACGCTTCGAGAAAGGCGTACGCTGAGACCAGGCCTCGTATCAAAGGCCGGTTTGCTAAGCGTACGGATTCCGAACCCGATACGGATAGGTGGTTGTTTACAACAACATCCAGTGTTGGGTCCAAAAATAGTTACGGCTTGGAAGTCGAATACGGTGTTGTTCCATCTTATTCCCGGGGGCTTTAATGTTGTTGGTTTTTTTTACCGTGATGTTGTATTATGTGTATACTAATTTCTCAGAAAATGATGAGGTGGAATTAGTTTTTGTTTTTATTTTTAATCTAATCTACCCGGGAAGGTTAAT



gi|159616792|gb|EY070701.1|EY070701 CATG3276.rev CATG Artemisia annua, Tanzanian, from Sandeman Seeds, 2+kb Artemisia annua cDNA

ATACTCCATCCGTCCCATAAT
||||||| |||||| || |||
TATGAGGGAGGCAGAGTTTTA

EST sequence (targeted fragment marked with yellow):
TAAAAATCAAATTTGATTTTTGTATAAATTATAATAGTACACAAACCTTTTCTTATACTTTATCGATCTAAATATATTAAATGTTTTTGTCTATATTTAGGATTAAAAAAACAAATTTAAGTCAAAATTTCATCTTGATTGAGCTCTAACTCAGCTCTAGCACAAATTTGAGCTCGCATTTAAACACGAGCTTGAAAAAAGTTCAACTCAAGAAAGTTAAATCTTGAGTCAAGCTCAAGTAATACGGTAAACACTAATTTGTTTACCACCCTAATTGCAATGTTTAAAAAAAAAACGATTTCTTAACCTACTCGGTTGAGTTTTAGATTTGATTTAACAGGCAACTCAACAATTTTTCCTTCGTCTAAAAATCAATTATAATGATCCATTGATTCCGGATTGAACGAACAAATCTTAACCTTGAGATCTGAAATAGGGATAGGTTATTGATATTCCTCTAAAATGATTGTAATACCTCCTTTAATTTTTATAATTTTGTTTTTGTTACTCCCTCCGTCTCAAAATTATTGTCAGAAGACAAGAATTACAAAGTTTAATAAAAGTGGGGCCAGTTTTGTTTTCAACCACTCAAAGAGGAACGTGGACAATTAATTTGAGACATCCTAAAATGAAAATGTGGACAATAATTTTGAGACGGAGGGAGTATAAAACTACGAAACATAAAATACATAACATAAAATATAAACTTTGAT



gi|159712544|gb|EY063213.1|EY063213 CATF7618.fwd CATF Artemisia annua, Tanzanian, from Sandeman Seeds, 1-2kb Artemisia annua cDN

ATACTCCATCCGTCCCATAAT
||||||| ||||||||| |||
TATGAGGGAGGCAGGGTTTTA

EST sequence (targeted fragment marked with yellow):
TCGCAATCACAAATTTCAAATGCACATACAAAAGTGAATGCATCTTCTTTCAATTTCCTTCCAATTTAAAATGTGTGGCTACAATTACTTTTCACCCTTCACATTTTAATTATTCTTCACACTTAAGCCATTCGTATTTATTAATCAGTCATATCTCGCACTCCCTCCGTCCAAAAATTTAAGTCCAGTTTGACTTTTTGAATCTAACTTTGACCATAAATATTTTTGCTTTTATTACATAATACTTGATGAAAATTATATCATATGAAAATATATTTAAAATCCAATCCATTTATATATTTTGCATCAAATATTATATAACACAACCGAAACTATTTAAGGTCAAAGTTGGATTAAAAAAAGTCAAACTGAACTTAAATTTTGGGACGGAGGGAGTATGTTACAAGGAATATGCACTAGTTATAATAAAATTTTGAGAAGAATTATTTTACATATTAAACTTTTATCACATACCAAGGGACTCATCCCCACTCTTCATCTATATAAAAACCAGTGTCTGAGATTAAAAGTATTTTAATATTTCACCTATGTTTTATAATTTAAATATCTCTTAAACCGTTAATCGTTAAGCGACAATAATTACACCATCATGACGAGTATTTATTTATCTTTCTATAGACGGACTTTGATATACTTT



gi|159663484|gb|EY052315.1|EY052315 CATC3671.fwd CATC Artemisia annua, Tanzanian, from Sandeman Seeds, 0.5-1kb Artemisia annua c

ATACTCCATCCGTCCCATAAT
|||||| ||||||||| |||
CATGAGGGAGGCAGGGTTTTA

EST sequence (targeted fragment marked with yellow):
TTGTGGGTGTTATATAATATTTGATGCAAAATATATAAATGGGTTGAGTTTTAAGTCTACTTTTCAATGGTATAATTTCTCATCAAGTATTATATAATAAAATATATATATTTTTGGTCAAAGTTAAACCACTTTGACTTTGAAAATTCAAAGTGGACAATAATTTTGGGACGGAGGGAGTACAAGTTATGATTTGTTAAAAAGTGTATGGTCGTAAACTTGACTTCTGTAAGCCAACTAAGTTTGTTTGTGATTTAAGTTCATGCGCATATTCATGTTCAGAGCATCTCCAATGATATGGACTTTATCAATTCCATACCGTTGACCACCATTTTTTATCTTTACCCAATGTTTCCTTTATATCTTTATGTAGATGTGTTGGAATGGGCTGGTCGGGTAACATGTCAAATGCGGTTAGCGCAAAATTGGTACATTCTGATATAGTTTGAAACAGGTTGGATCAGGTTGACGGTTGACTCAAGGCGCTTTCTGGAAAAAAAAAA



gi|283966489|gb|GW331444.1|GW331444 AAGST_UP_016_B02_25AUG2004_014 AAGST Artemisia annua cDNA, mRNA sequence

ATACTCCATCCGTCCCATAAT
|||||||| |||.||||| |
TATGAGGTTGGCGGGGTACTT

EST sequence (targeted fragment marked with yellow):
GATCCCGGACGGTTGCTTGCTGTTCATATAATGCATACAGCTTTGGTTTCTGGTTGGGCCGGTTCGATGGCCCTGTATGAATTAGCAGTTTTTGATCCTTCTGACCCTGTTCTTGATCCAATGTGGAGACAGGGTATGTTCGTTATACCCTTCATGACTCGTTTAGGAATAACCAATTCATGGGGCGGTTGGAGTATCACGGGAGGGACTATAACGAATCCGGGTATTTGGAGTTACGAAGGTGTGGCTGGAGCCCATATTGTGTTTTCTGGGTTGTGCTTTTTGGCAGCTATTTGGCATTGGGTGTATTGGGATTTAGAAATTTTTAGTGATGAACGTACAGGAAAACCTTCTTTGGATTTGCCCAAGATCTTTGGAATACATTTATTTCTTGCAGGTGTGGCTTGCTTTGGTTTTGGTGCATTTCATGTAACAGGCTTATATGGTCCTGGCATATGGGTGTCCGATCCTTAT



gi|159715326|gb|EY065550.1|EY065550 CATF8886.fwd CATF Artemisia annua, Tanzanian, from Sandeman Seeds, 1-2kb Artemisia annua cDN

ATACTCCATCCGTCCCATAAT
|||||| ||||||||||| |
AATGAGGGAGGCAGGGTATAA

EST sequence (targeted fragment marked with yellow):
TTAGATATATTTCTAAGGGTCAAAGGGGTTAAGTTAATGATTTAACTACAAAACAAGGCACTCTTTGTAATCATATTAAACAAGATACTATTTGTAATCTCAATAAACATGCTAATAGAATTATAAAATATATGTAAAATGTGGATAGCCTACTCGTTTTTAACAGCAAAAGAAAGCACCAGTTTGACCCATTACAGAACCCACCCAAACCACCTAATTTGTCACCTCCAAGCAGAACAAAGCACTGGAAATAAACATACCCTGTATTTGCCCATTCTCCAACCCAGCCGAATCCATGATGAGCTCTGCATTGATCCAAATTGTGTATAACAAAGAGCAATATTGTCAGTAGTAATAAATAGTACTCCCTCCGTCCCATACAAAAATATTTATGGTCAAAGTTGAAAAAGAAAGACTTTAAAAAGTCAAACAGGACATTTAATATGGGACGGAGGGAGTAAAAGTGTAAAACATATGCACAAAACTAGAAGTCAACTAATTTGTTATTTTCGAACAGTTTCATAAGTTAAGGAAATGTTTGGACGAGTATGTAAACTGATTATTATCGTCACTCCAAGCCGTAGTATTCAAAATACAGTGTCTGGAAAACCTGATTGTTAGAATGTAAGTAGTTACTGCAAGAAGTGTGAGCATCGCANAAAACTTAAAATTATCTTACTAGTGAAAAAATCACTGATTTTGATCACTTTTGAGATGGACATCCAAATTTCCCATTTCATTTGTGAAACTCTGGACACATACTATTGCTGCTATTGGAACAAATGACACAATCAGATCATGTGCTCTGGAAAAAAAAAGTCAAG



gi|159753638|gb|EY053295.1|EY053295 CATC4227.fwd CATC Artemisia annua, Tanzanian, from Sandeman Seeds, 0.5-1kb Artemisia annua c

ATACTCCATCCGTCCCATAAT
|||||| ||||||||||| |
AATGAGGGAGGCAGGGTATAA

EST sequence (targeted fragment marked with yellow):
CAATGAGATGAGACTTTAGTGGGTAAAAATGATATTTGATTGGTGGAGAGTGTAGTTAGTGGAATTTTCTAAAACTTTGTGCATGATGAAAGCGGACACTTAATATGGGACGGAGGGAGTAAAATCTTAAAAGCTTCAAAAAAAAAGGCGCCACGCCTTGCGCTATAGCGCGCTTTATCACGCCTTATCACGCTTTATTGCACGCTACGCCAAAGGATGACGCCTTGGCCTGTTTCGTAACGTGGATGCCATGCCTTACGCTATGGCGCGACTATAACGCGCTATTTAGAACCCTGGTTAAGACACCTCCTCCTCTCCATCTAGTTCAATAAAAGGCAAGGTTGTAAAAATCGCGAATCGGTAGTCGGGCGGTCGACCACCTTGTAGATTGTAATCGGTCTAGGCGGGATTAATCGGTGATTAATCGAATTGGCATTTTTGAAAATTTTTGGGTATTTCCGCCAAGTTTTGTGTATTTCTGGCGAGTTTTATGTATTTCCGGCAAGATTTTTTATAAAAGACGACTTGTAATAGATTAAAACGGTTACTATAAGTGATCAAAATATGTTTACGGTGAGTTTTGCGTACTTCTGGCAAGATTTGTGGGTTTCCGGCAAGTTTGACTATCATTGACCGCCGTTGACTAAAGTTGACCTATTTGTTTGACCCAGTTGCAT



gi|159718196|gb|EY070466.1|EY070466 CATG3109.rev CATG Artemisia annua, Tanzanian, from Sandeman Seeds, 2+kb Artemisia annua cDNA

ATACTCCATCCGTCCCATAAT
|||||||||||||||||||||
TATGAGGTAGGCAGGGTATTA

EST sequence (targeted fragment marked with yellow):
TGTCGTGGATTTTATCCGTTTGTTTTTTTTCTTGTTTAGTGGGTCCAAAAATACCACAGTATATCATATTCATAGATTCATTACACATTAATTTGGTGTCTATTTGTGGCCCTTTTTTGTTTTCACTACAATACTCAAATATCTATACATTTTCTTATATCGTACTACCTCCGTCACATAATAATTGTCCACTTTGACTTTTTTTAGTCTTTTGTATTCAACTTTGACTATAAATATTTTTATTTGTGTGATATAATACTTGATTAAAAATATATGAATAGATTGGGTTTTAAATGCATTTTAATTTGGTATAATGTTTATCTAGTATTATATAACACAAATAAAAATATTAGTGGTCAAAGTTTAACAAGACAGACTCAAAAAAGTTAAAGTGAACAATTATTATGGGACGGATGGAGTATTTTGTCATCCAAACATAAACAATCGTAATCATACACTTGTTTATATCCATTGTCATTCTACAGCATACCAAATCCGATACTCATTATCATCCCTATCAACAAACCAAACGGGCCCTTAAAATTATTTTGAGCTATGCTAAATAAAATGTTTTGATTGGTAGCTTTTCAAATAATTTCGTTCTTTTCTTTTTGATTAACCAAATTAAAACATATCATTGCATTTTTTAGATTATTTTTTTTAGTTCTTTTGTGGATGTAACATAGTTCAATTATTTTTCT



gi|159639821|gb|EY115537.1|EY115537 CAZI942.fwd CAZI Artemisia annua normalized leaf library Artemisia annua cDNA clone CAZI942

ATACTCCATCCGTCCCATAAT
||||||| |||||||| |||
TATGAGGGAGGCAGGGATTTA

EST sequence (targeted fragment marked with yellow):
TTTGTGTGTGATATATAATATTTGATGCACAATATATGAATAGATTGGGTTTTAAATGTATTTTCATTGATATAATTTTCATCAAGTATTATATAACACAAACAAAAATATTTAACGTCAAAATTGAAAAAGAAAGACTTCAAAAGTCAAACGTGGACATTTATTTAGGGACGGAGGGAGTATTTATTAGTACTGTTTATCTTGTTCTCTGTTTGCTTATTAGTCTCTTAAATCTTTTTCGGGAGCAAAGATGGCAAATTATTTCACGGCTTATAGGATAGATCACATATTGGGTTTCTTTAGAATTTGGGAGCTTCCGGAACATGCCATGACAGGTTTAGTTGGGAAATTCCGTCCATCTATACCACTTAGCCAGGAAGAACTTGAAAAAGAGGGGATATGGGATTTTGATCGATTGAGCAAACCGTACATTCTTCAGGAGCATTTACAGGAAATATTTGGACCGTCATGGATAGTTGTGGCTTCTCATTTCATGAATGAGATTGAGAAAAATCGTTATCAGTTCAAAGACGACTGTAATACAGAGAAAAAGATTGCTGCCAAGCTGAAATCGCTTATTGAGAAGTCATTGTTGTTGGAAAGTGAAGACAAATTAAGGCGTGGTCTCTTTGATCTTGTGCAGAATATAGTGCTTATTAGAGACCCTGAGGATGCTAGAAGCTTTTATCCTCGCTTTAACCTAGAAGATACATCTAGTTTCAAGGATTTGGATGATAACAGCAAANATGTTCTTAGAAGATTGTATTATGACTACTATTTCCAGCGACAAGAAACTCTTTGGCGCCAAAATGCCATGAAGACTTTACCTGCTCTGCTAAACTCGTC



gi|159679561|gb|EY051696.1|EY051696 CATC3314.fwd CATC Artemisia annua, Tanzanian, from Sandeman Seeds, 0.5-1kb Artemisia annua c

ATACTCCATCCGTCCCATAAT
|||||||||||.|||||||||
TATGAGGTAGGTAGGGTATTA

EST sequence (targeted fragment marked with yellow):
TATATTTACCAAGATGCAGAATTACTCCCCTTTACCCAAAAAAAGATAGCCAAAGTCACGATCATATAAGAAAAGTTCTAACATATACTACCTCCGTCCCATAATAATTGTCCACTTTGACTTTTTTTAAGTCTTTTCTATTCAAGTTTGACCATAAATATTTTTATTTGTGTAACATGATACTTGATGAAAAATATATGAATAGATTGGGTTTTAAATTTTTTTTTATTTGGTATAATTTTCATCAAATATTATATAATGCAAATAAAAATATTAATGGTCAAAGTTGAACAAGAAAGACTCAAAAACGTCAAAGTGGACAATTATTATGGGATGGATGGAGTATCAGAAAAAAAATTAAAATTCAATATGATAAAATTTATGGCAATTAATTTTTTTATTTTATTATTTATTTATTTATTTACTTACTTTTTTTTTTATCAAACTAAAAAAATCCACTTTCCTCCTTTTATTCAAAATTAAATATCTCACACAATCGTTAACCGTTACACCAAAAGAATTATACCATCTCGACGAAAATTAAATCATCTTTCTATAGAGGAGCACTTCTATATATAGACGAGAAATACTTTCGACAAACATTTTCTTCGCGTTNNTTTTTTTTTTTTT



gi|159651172|gb|EY066723.1|EY066723 CATF948.fwd CATF Artemisia annua, Tanzanian, from Sandeman Seeds, 1-2kb Artemisia annua cDNA

ATACTCCATCCGTCCCATAAT
||||||| |||||| || |||
TATGAGGGAGGCAGNGTTTTA

EST sequence (targeted fragment marked with yellow):
AACCAAACGCCCACATAGACTGCTGAGCTTAAACTATAAGCCATGCATTTCACTCAGTGAGTAAACGAGCTGGTCCAAGATCGTGCTTCTTTCACATACCTAAATTTCATTTCGAATGTAACGACACAATATGCACATCCAAAAAACAGAACAGAAACAGGGGATGCTTTAATAATATACAGTTTGTGACTTTGTTCTTTCGAAGACTCTAGATTTACCATAGGCATCTGGCACACTTTCTTCCATATTTCTTAAGCAAGTTCGAATTTGAATATCATATGCTCTTATTTTTTAGGCTCGTCATCGCATAATGAACATAAAACTGAGTTAACATATCTTTGCCTATGTACTCGATGTTGACATGGCCTGGTACATGATTTCACCAATTCTTCCAAGAGAGTATATTGAGTTCCTTGAAACCAACTTATTCCCTCTAGTAATAATCATGATTACTACTCCCTCCGTCCCAAAATAAATGTCCAGTTTGACTTTTCCGAGTCAAACTGGTTCAACTTTGACCTTTAATATTTTCTTTGTGTTATATACTGTAATACTTAATGAAAAATTATACCAACAAAAAATACACTTAAAACCCAATTCATTCATATATTTTGCATTAAGTATTATATAACACCCGCAAAAATAAATAAAGTAAAAGTTGAACCAGTTTGACTCAGAAAAGTCAAACTAGACATTTATTTTGNGACGGAGGGAGTATTACTATTATTACTATAATTTTAGTTGTTGTTATCCTTT



gi|159631284|gb|EY057565.1|EY057565 CATF10618.fwd CATF Artemisia annua, Tanzanian, from Sandeman Seeds, 1-2kb Artemisia annua cD

ATACTCCATCCGTCCCATAAT
|||||| ||||||||| |||
AATGAGGGAGGCAGGGTTTTA

EST sequence (targeted fragment marked with yellow):
TATATTTATGGTCAATGTTGAACCAGTTTGACTTTGAAAATTCAAACTGGACAATAATTTTGGGACGGAGGGAGTAACAACCAAGATCTGTGGGGTCTTAATGGTGGACTACGTTTTTTAGTGGGGTCTAGTGTACACTGTACAAGGGTCTCGTACATCAGATGGTGGTCTTGTTTTTTTTTGTTAATGTACTAGATGTATCATTGTTGTTGTTGTACTAGATGTATCATTATATGTACATAATATATAATGTCAATGTAAATACATTTTTAATGTACGTGATGCCATGTATCATTACATTTACATGGTGGTCTATCGTGTACGAGTATTTGTTAATGTAAATATAAATAAATTTTTTAATCTGCCTAATGTATCAGTAGACGTACATGGTGGTCTCGTGTATTTGTTAATTTAAATATATTTTTAATGTACTTGATGTATCAGGTTATTTTTAAAAAAGGTGCACCTGTATAAAAATAAAAGCAA



gi|159752947|gb|EY053269.1|EY053269 CATC4212.fwd CATC Artemisia annua, Tanzanian, from Sandeman Seeds, 0.5-1kb Artemisia annua c

ATACTCCATCCGTCCCATAAT
||||||| |||||||||.| |
TATGAGGGAGGCAGGGTGTAA

EST sequence (targeted fragment marked with yellow):
ATGTTCATGGATAAATATTACTCCGTTTTTCATAATATAAGCGTCCGCATTACTACCTCTGGCCCACATTAAGTGTCCACTTTTACTTTTCAAAGTCTTTTTCCTTTAACTTTAACCTTAAATATATTTGTTTGTGTTATATAAAAATTAATGAAAATTATACAAATAAAAATACATTTAAAAACTTCATCCATCCATATATCTTGCATCAAGTATTACATAACACGAACAAAAAAATTTAAAGTCAAAGTTGAAGACAAAAGACTTAAAAAAGTCATAGTGGACACTTAATGTGGGACGGAGGGAGTATTATTTTAAGATATTTTAAAATAAATGAAACTGTAGTTAGTAAAATTTTATGTTTTCTGAAAAATAAACGCTAGTTATGAGATGAAAGGAGTAATATATTTTTGTCAAAAGTACAAAAACGTTTAAGTGTGGTGTGATTTGTATGTGAAAGAAGATACTTCTTGTGCCACAGTGCAAAATTAAAGGATGTTTGAATTAACTTACTTCAACGGTTTACAGGGTTATTAGGTTTGTCAGAAATAAAATTTGCTTTGACCCGAAACCCCCTTGAAATGACACGCTGGCTGATGACATCAAAATTTTATCTCATTCTTAGATTTCTAGTAGA



gi|159747753|gb|EY059305.1|EY059305 CATF11518.fwd CATF Artemisia annua, Tanzanian, from Sandeman Seeds, 1-2kb Artemisia annua cD

ATACTCCATCCGTCCCATAAT
||||||| ||||||||| |||
TATGAGGGAGGCAGGGTTTTA

EST sequence (targeted fragment marked with yellow):
CAAACTGGTTCAACTTTGACCTTAACTATTTTTGTGGGTGTGATATAATAGTTGATGAAAAATATGTAAATAGATTGTGTTTTAAGTGTACTTTTCAATGGTATAATTTTTCGTCAAGTATTCTATACCACATAAAAAATATTTAAGGTCAAAGTTGAACCAGTTTGACTCTGAAAAGTCAAATTGGACACTTATTTTGGGACGGAGGGAGTATTATTTATCAACTTCGGAAAACGGGCCGTTGATAAATGTACTATAAAGACAACTAGTGAAGAATAATAAAACATTACTCATGGGAAATCGATCCTCCTAGAAAAAAAAATAATTAATCGAGACAGCCGTCACTTTCATTCCCGCAAAAAGTTCTGGTCGTTTCTTATTAATTCTCACAGATTGTTGTTTGTATTCATTAACCCAATATAATTACTCCACCTCATCCAATAAAGCCCATGCAACTCATGCAAATAATATATTGAATGTGCACCTTGTTTACACGATCTACAAACAATAAAATCAAACCCTTCAACATCTCNNAAAAAAAAAAAAAAAANAAAAAAA



gi|159632149|gb|EY069305.1|EY069305 CATG2270.rev CATG Artemisia annua, Tanzanian, from Sandeman Seeds, 2+kb Artemisia annua cDNA

ATACTCCATCCGTCCCATAAT
|||||| |||||||||||||
CATGAGGGAGGCAGGGTATTA

EST sequence (targeted fragment marked with yellow):
TTTCATATCACAGTAACTCATGCTTACCATTTGATATTTATATTCCCGTTACTAATAATTTAGCCGTATTTAATATTCAAACCCGTGTATGCATAAATTAAACTTTTAGATAGAATAACATGAGTCCTTATTTAAAAAAATATTCTAATGGATGAAAGTCTACAACTAACACTATTAAAACTAATTCGCATATTTACAAAATTTTCTAATTTAAATAGATGAAAGTCTGAAACTAATACTAATACTCATGTCATTTTAAATAAAGTTCATATTATAAAGTATAAGGGGTATAAAGTGTAAGGGTTTATTTGTGTTTTTTTTAAGTTATTAAAAAACATGGAAACTTGTAATTTTACAATTAGCTCAATATATTTTATGTAAAATTCAACCACTAAAGTTTTATTAATTACTTTCTCTTTTTTTTAATTTTTTATTTTCATAAATTTGACACCTATATTTTTATGCATTTTTTTTTTCTTAACCAAATTTATCCACCAAATTTATTAAGTTTGACTAAAACCAATTCAATTTTGACTTTCTATTGACCAATCATATTGCTCGATTTCGTCTACGTGGCAAAATCGAGCTCTCCTATTGGTCTAATTTTTTTTTTTCAATGAGAAAGGTTTTGCAAAAACACTTCGAAATGATGTAATTCTTTTATTATATAAAAGATATAAAAAAAATAATAATATTTACACTTATTATGGGACGGAGGGAGTACTTCAATATTATTATACATTAAATGGAAAGCATGCATATGCTACGCCG