| mature miRNA: ATACTCCCTCCGTCTCATGAA species: Festuca pratensis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|237623451|gb|GO895858.1|GO895858 RDD_cLiFpEfI12nb_6x1_4_L12_cLibkitLD5_F06 RDD_cLiFpEfI12nb_plant Festuca pratensis cDNA clon ATACTCCCTCCGTCTCATGAA EST sequence (targeted fragment marked with yellow): CATGGTCACCTCCGAGCTTCTGGTCGATGACGATGAAGATGACACCGCCGCCTCCTTTTCTGGAGGACGGAGGAGACACCGTCCTGGTGTCATGAAAAAGCAAGATGGGCAGACAAGGAGGCTCTAGTGTTTTCTGCTACCCACACTGTTTCGGAATATAAGCTGTATTTCGTTTTGTTAGGACAATACTTTTTCCATACTTTTAACAACAATTTCTTTATGTATACGTGGCTTATCTGCTATTGGATCGCAAGCACAAGTCTGTATGCTTGCAGTTTAATATCACATAAACCACATACTCCTTGCGTCTCATGAAACTTGTCTGAGATTTATCAAAATTTTGATGTATCTAAATACTACTTAGTGTCTAGATACATTTGAATTAGATAAATCTCAGACAACTTTCATAGATGGAGGGAGTATTAACAAAATAATTGTTGGTCAAAGTTTTATCTTAACGAAGCAAAATACAGCTTACTTTCTGAGATGGAGGGAGGCATATTTGGTTGTAAGATGTGCCGTGAAGTGCTATGCCTTTCGTAGATATATGATCATCTAGCACCATGCAAGTTTTCTATTTGACTGGCCTTATGCCATATTGCTGTAAACCGACAATAAGTTATCCATGCTATGGAATAAGTACCAATACAAAGAAATATTTGTTCAAAAANNNNNNNNNNNNANNNAANNAAAAAAAAAAAAAAAAAAA | |||||||||
gi|237620513|gb|GO894429.1|GO894429 RDD_cLiFpEfI12nb_30x1_3_D07_cLibkit5_B04 RDD_cLiFpEfI12nb_plant Festuca pratensis cDNA clone ATACTCCCTCCGTCTCATGAA EST sequence (targeted fragment marked with yellow): ATTGCGGTGCTGATCAGAACTACAGTACAATAGAGATTACCGTGCTGGTCAGAACTACTCCCTTCATCCCGTGACATTTGTCTGGTTCATTTAAATTTTGATAAATCTTAGATAAATTTTATAGAACGGAGGGAGTATATTATTATTTTTTAGCGTGGCAGGGTCGTGCATTAGCAACAGATCCCGGTTTATGTGATGGGAAAGGAAGCTTGTCACGTTAGTACACTATTACTCTTTCAGCATCTCGATAAAAGTCACCATAAGACTACCACAATAAAGATGTCATAGAAAGTTTTATACATTTTATCAATGCAAAAACCTAATGTTTCACTATAAGTAATGATGAGAGAGATTTCACGCCCATAAGCTGGTGTTGGCTGCACGATCATCTGTATTTAGATCTAAACTATTTGATGATGAATTGGATGGAGAGAAGAATGAGGTTGACGACAGCGAGGATCTCAAAGAGATTGTTATCGATGATATAGAGCCAAAGGTTTTCAAGGCGATGCTTCATTTCATCTACAGAGATTCCCTCGTTGATGATTGTGAGTTGGATGCATCAAGCTCTGGGGGTTCTATTTTTGATACTTTGGCGGCAAAATTGTTGGCTGCAGTAGACAAGTATGACTTAGCAAGGCTAAAATTGCTTTGTGAATCTTACTTGTGCAAAGGCATTTCTGTGGTCTCAGTTGCGAGTATTCTAGCATTGGCTGATAGTCACCATGCTATGGAGCTTAAAACTGTTTGCCTAAAATTTGCTGCGGAAAATCTTTCAGCTGTGATCCGGACCGAAGGATTTGATTACCTCAAAGACAACTGCCCATCACTCCAGTCAGAGATACTGAGAACTGTTGCTGGGTGTGAGGAACC | |||||||||