| mature miRNA: ATACTCCTTCCGTCCCAATTT species: Nicotiana benthamiana database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|150429434|gb|ES888027.1|ES888027 NBT062_2006-12-08_1/NBT062_B04_015_1 Nicotiana benthamiana trichomes Nicotiana benthamiana c ATACTCCTTCCGTCCCAATTT EST sequence (targeted fragment marked with yellow): GGCCGGGNANTGNNTTGAAGATGTATATTTGTTGTGTACATTGCCACTAAGCTCTATAAGGACATGTTGTGGTTTATGGAGTATGGACCTGCATGCCTTGCATTGTCAAATTTGAATGGAAGGAATATATTACATGTTGCATGTTATGGTGGTTCTTTTCTGTACAGGCATGAAGCGATACTGTTTTANCATTATATAAACAACAACAACAACAACTACCCAGTATATTCCCAGCAGGTGGGGTCTGGGGAGGGTAATATGTANACNANGCTTACCCCTGCCC | |||||||||
gi|39868188|gb|CK289568.1|CK289568 EST752290 Nicotiana benthamiana mixed tissue cDNA library, normalized, full-length Nicotiana ATACTCCTTCCGTCCCAATTT EST sequence (targeted fragment marked with yellow): GTCCTTTTGTTTTCTTGTTTAATTCAACTCTTTGCTTAACCACAACACTCAACTTTCATAAACTAAAGGCACAATTCTTTTTCTAAAAACGCGATGTTCAGGCAAGCAACACTTCTAAACTAATCTATCAAATACCTACAACTTCCGTACCAGCAAACGAATTCGGTAACTTTGCCAATCAAGACTTGGATAGATGGAACAGTTCACCTAGTAACGCTGGCTCAAGGTCGTCATTCCATATGTTGACTAAGCCAGCCCCTCAGTGGCAACTAAAGACACAATATTTACGGCATACTTCTTAAGTAAATCTCAAATTTCAAGAATCAAAAGTAATACTCCCTCATTTTCAATTAACGTGAACCTATTTCCTTTTTAGTCGGTGCAAAAAAGAATGACCTCTTTCCTTATTTGAAAAATAATTTACCTTTATGCAATGATTTATAACCACACAATATATATCTACCTTATTTTACGCCACATGTTCAAAAGTGTCCTCTCTTTTTTTAAACTTCTTGCCAGTCAAATGGGTTCACATAAATTGAAACGGAGGGAGTAAGTTTTATAGTGTAATAGAGTAATCCTCTGTTCCAATTTTGTGCAATATTCTTTCTTTTTTAGTTTGTTCCAGAAAAAACTATATTTTTCATATTTAGAAACAATTTTAAATTTAAAGTTCTCATTCTCTCCCCTTAATGAGATGATCTATAGCCAAACAAGTATCGCTCGCTTGTTTTAGATCAAAATTTCAAAAAATCTTTCTTTCTTTCTTTCTTAAACTCTATGCCAGTCAAACAAATTGGGACATAAGGAGTGTATTAACTAAAAGTAAGT | |||||||||
gi|227564692|gb|GO601651.1|GO601651 NBERO1CH_T3_016_H02_01MAY2006_002 NBERO1CH Nicotiana benthamiana cDNA, mRNA sequence ATACTCCTTCCGTCCCAATTT EST sequence (targeted fragment marked with yellow): TAAATACAGATCTGAGCCTCAGTTCTCATCCCATAATCTTACTTTTGGTGTAATTGGCATGGAGGAAACTCTTTCGGTCAACCAAGACTGCTGGATTCAGAGAGTTTTGGAAAGTTCTTTGAGTGGTTTCCCCTCTTTGGCACTCTCAGCAGTCAATGATCGCTCAAAGTTTCCCCTTTTCACATGACTCTTTAGCAATTAAGTTCAAATGAGGCAGTGAAGATTTTTATTCTTTACTCATCAGATGGTTGAACTTTGCTATGTCTTGGCGTGGCAGCTTAAGGCTTCTTAAGCTTGCAGCCATGGCAGGGTTTGGCTTATGTTTGAGAAAAAGCTAATCTGAGCCTCCAGTGGCTTCTCATATGAAAATAAAGAGACTCAAACAGCCCTTTAAATGGTGGGATCTTTACCGAAATAGCTGGCCAGATTCACTATTATTCCCCCGTTCCACTTTATGTAAACCTATTTTCTTTTTGATCCGGTCCAAAAAGAATGATCTCTTTCTAAATTTGGTAACAATTTAGATTAAACTTACAGTTCTACCTTTAACGAGTAATTTTTATAATCACACAAATACTCTGATCCCCTAGGTTCACATAAATTGGAATGGAAGGAGTAGCTTCTTCCAACCAGTATACATGGATTATACACTACTTGTACAGTCAAACTACTCTGTAACAACCATCCTCTCTAACAACGCTTCACTGTAACGGCCAAGTTTTCTTTGGAACCAATTTCAGTGTTGTCAAAGGCGCGGTTAAAGCG | |||||||||