| mature miRNA: ATACTTCCTTCGTCCCAAAAA species: Hordeum vulgare database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|16315150|gb|BF254890.3|BF254890 HVSMEf0005F09f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): TTAATATGGGCCTCTCACATCTGCTGCGGCGGCCGTCAGTGTGATGGCTGACATGTTCTTGTGCATGTGTTTTTGTTCTGCACATTATTTTCTATCTTTTGATAAGCAAGGAAAGGAAGTTATACGGAACAATTATACATATGCGAATGTGCTTTCAATTGTATTTAGTAAGGTCACACGGTTGCCGCTGGCCTCTTCCCTTTAAACGTACTCCCTTCATCTTAAAAAAAAGACAAACCCTGGGTTTGAATCTGGACATGGGTTTGTCTTTTTTTTAAGACGAAGGGAGTATGTTTGTGCCCATTTCGTGGGTGGTATGCGTGCATTGAGACGCGTATGAATATGTGTCTTTGTGTAAAAAAAAAATGAAAAGAAGTTAAAAAAAACTACCATTTTCTATTAACACATCCTTGCTTAATATAAGACCTATGTTTCAGGTTATAAGACTTTCTAGCATTGCTCATATTCATATATATGTTAATGAATTAAGACATACATATGTGTCTAGATACACTAATATATAGATATATATATATATATATATGTACGGATATATATATACTATATAGCTGTATCTAGATATATATACATATCTAGATATACAATATCTGTTGCTCAAAAGTGTGTAGTGCTGAATGCCAGCAAGACGAGCACACAATTGCAACAGGGCCTTGATAATTTTGCTTGTTAAATTGTACATTATTGAGGGTTGGGCCTGAAAGCCTTTACCCTGACACATGCTTGACCACTGTTGGGTTGGCGGCTATAAAATGAACCCATTGCTCGTGGGAGGAGAAAAAAAAAAAAAGAAAAACCCCAGGGGGGCCCGAGACCCCATTATGCATAAGAGGAAGGGTTTTCACTTCACGGCCGCAC | |||||||||
gi|166075496|gb|FD524396.1|FD524396 RUS75G11w HF Hordeum vulgare subsp. vulgare cDNA clone HF21O11, mRNA sequence ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): GTTTTTTTTTCTTTTTTTTTGGAACGAAGGGAGTACTTCCGAGGGGATACCACAATACAGTATAATGTACAAGTCTCGTACAAATACAACTTATAACAACATAAACAGAAAGAACATGGCATGTACATCCATCGTTCGCCCAATATTTCTGAGGCCCTTGAGAGACTTGCCTCAGTGCAGCGTCTCAAATCAAAGCCTTTTGAAGCCTCTCCAAAACACACACTGTATGTTTTTCTACTAGTAGCTGAACGTATGACTGAATCCTGTCTCGCAAACCTCACACACCTTCATTGGCTGCTCTACAACAGCAGTAGCTTCAGCACAACTTTATGGCGCCGACAACCCGCGATCTAGAGAAAGCTCTACTAGATCCACCTCCATTTGACACAATCCATCTTGAGGAATGTCCATTTTGCTACGACCATTGCTCGGCTGCGCCTCTTGTTCGAGTTGCTCGAACAGCGAGTTCATCTCCTCGACTGAGACATTGACTACTTCTACGACAGGAAGCTCGTCACGGCAAGTGGCCACTGTCCCATTTGGTTCAGACATACCTGCAGTCTGCAGCTCTCCTGCGGTTGACAGCTCTGAACTCTGCTCGCATACCACGCGTAATGCTTCGCTCGATTGGTCTCGAATCGACTCCCTGCGACCATTGAGCCCAGTGGCAGCACAGGTCGTCGTCAGTGCTTCTTCATCG | |||||||||
gi|30080497|gb|CB878511.1|CB878511 HP08M19T HP Hordeum vulgare subsp. vulgare cDNA clone HP08M19 5-PRIME, mRNA sequence ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): CGGCACGAGGATCACCCTTGATGGACGACGGTGGAGCAGTGGCGGCCTGGATCTTGCCCAACTTTGGCACCGGATTGGCTGGACTTGGCGGGTCGGGGCGAGCAGGACGACGAGGAGGAGACACCCGTGAGCCATGGAGCCGTCGCCCGTCGAGGTGTCGCCACGGAGGAGCAGGTGGGCGGTGGCGAAGCTGGCCTCTGTGCACACAAGTAAGCAGGGCGCACGTTGACAGCTGCTGTGCAGGTTGGCTGCGCCGGAGGAGTGGTGCAGTATGATCCCAACGGTGGCTGGGGCACACCGCCGGCGACGAGGAAGACAGTGGCTTGGGCGCGCGGTGCCGCGGACGACGGAGGTGGAAGACGGGTCGATTAGCAAGAGATTTAATAGAATAAGGGTGTTTTTGTAAAATTGAAAATGTACTAAGCCGAGGACATTCTTTTCCGGACGAAGGAAGTATGCAAAGTGTGGGTGCAAATATAGCAAGCTTTGTAAAAAAATTTAATAATAACTACTTATACAAAGGCTGTTGGAG | |||||||||
gi|166070553|gb|FD521635.1|FD521635 RUS03F03w HA Hordeum vulgare subsp. vulgare cDNA clone HA03G11, mRNA sequence ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): AAAATAAATGTCTCAACTTTATATTAATTTTAATATAAAGTTGTACTAATCTTGAGACGCTTTATAGGATGAAGGGAGTATAACTTTGGGAAGAATACAAAATTCAAGTTCTTAGCAACCTTCCAGCTAGTAGGGTTTGATGCGCCGTTATGCAATGTAAACGTGCCCTTCTATCTTACATCTACGTGCATCAAGGGAACCTGCAGAACTTGCACATGCACGCGATTGGATAGCATTTGGCCACCTGGGAGCACCTCCCCTGACAAAGAGGTTCGTCCTTGTTCTCAATGCGGCATGAATCGTCACAGTTGGTGGAATTGCATGGATCATGTGTCCCAACATATCTTCCAAAACAAGATTCTCCGGGTCTAGCATCTGATGATGATGATAGCATGAGCAAGATTACAGTCATGCACATCAGGGCGGTCCTC | |||||||||
gi|161453573|gb|EX582863.1|EX582863 HDP13E15w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP13E15, mRNA sequence ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): GGGAGATTAACTACTTCCATGCACGTGGAGTCGCCGGCAATGGCGCATCCAGGGCTTCACCCACATTGCTAGCTCTTCCTTCCATGCATCCCCTCTCTCCGTATATATATCTAGCCACCTACGTACGCTGGCATGCACACCATTATCAAATTCAACTGCGAAAGCACGAGTAAATTAAATACCATGGTGCGTGCGATATTCTCCCTCCGTTCCTAAATATAAGACTTTTTTGAGATTTCATTAAAGGACTACATACAAAGCAAAATGAATGAATCTACACCCTAAAGTGTGTCTATATACATCCGTATGTACTTCATTAGTGAAACCTCTAAAAAGACTTACATTTAGGAACGAAGGGAGTATATAGTACAGTATGTGACTACCATGTAAGTACACATGAGGCACAGTATTATTTTTTTTCATAAGCCAATCTCATTGTAAGTACGTACAAGTTATTTCAAATATAC | |||||||||
gi|18241623|gb|AV945826.1|AV945826 AV945826 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): CCTACTACAACCATGGAGGCATCCTGCCCTATGTAATCCGCAACATGGCAGGAGCTCAGAAATAGGCGAACGCGGCCACATACCCTTTTCGACCTAGATGGCGGCATGGCAGTCTTGTTAGTGCCACCGTGGACATCAAGAGTTTGCTCATTATGTTGTGGCCTTATGAATAAACCGAAAATAAAGCTGGCATTTCCATGCCTGGCGTGGGCGCAGGTCGACTTGGGGGGAGTTTGGTTGTGGTTATGAAACATGTGTTCATTTTGAACAAATCTTCAGTTGTGGTGGATTAAATTGGTAGAGCCTGGTTTACATTGCTTTGTGCTAAAAACAAATTTGAACTGGTAGCAATCTTGAGTATTTTTTTTAATCTTTTGCTCGACCAATCGACTGCCTGGTTTTGCATACCTGTAGTAACCTTTATTTACTAAAGTAAGTTACAAAATCAGGGTTCTCTTTGTTCCTTTCTATAAAGTGTATTTGTTTTTTAATAAAATTTTACTTCCTCTGCTAGTTCTCCTTAATTATAATTATTTTGGTACGAAGGGAGTACAATGTAAGGTGTGTTTCTTGTAAATCCTTGTAATTTTTTTATTAGCCCTAAAAAAGAAAGTATC | |||||||||
gi|24228792|gb|BU977999.1|BU977999 HA12G11u HA Hordeum vulgare subsp. vulgare cDNA clone HA12G11 3-PRIME, mRNA sequence ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): AATTTCATATATTTTATTATTAAAATAAATGTCTCAACTTCATATTAATTTTAGTATAAAGTTGTACTAATCTTAAGACGTTTATAGGATGAAGGGAGTATAACTTTGGGAAGAATACAAAATTCAAGTTCTTAGCAACCTTCCAGCTAGTAGAGTTTGATGCGCCGTTATGCAATGTAAACGTGCCCTTCTATCTTACATCTACGTGCATCAAGCGAACCTGCAGAACTTGCACATGCACGCGATTGGATAGCATTTGGCCACCTGGGAGCACCTCCCCTGACAAAGAGGTTCGTCCTTGTTCTCAATGCGGCATGAATCGTCACAGTTGGTGGAATTGCATGGATCATGTGTCCCAACATATCTTCCAAAACAAGATTCTCCGGGTCTAGCATCTGATGATGATGATATCATGAGCAAGATTAGAGTCATGCACATCGAGGGCGGTCCTCATCTTGGCTAACGGCGGCGTTGATGATGGGAATTGAGCCTCGTGCCG | |||||||||
gi|18242882|gb|AV947085.1|AV947085 AV947085 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): GCCTACTACAACCATGGAGGCATCCTGCCCTATGTAATCCGCAACATGGCAGGAGCTCAGAAATAGGCGAACGCGGCCACATACCCTTTTNGACNTAGATGGCGGCATGGCAGTCTTGTTAGTGCCACCGTGGACATCAAGAGTTTGCTCATTATGTTGTGGCCTTATGAATAAACCGAAAATAAAGCTGGCATTTCCATGCCTGGCGTGGGCGCAGGTCGACTTGGGGGGAGTTTGGTTGTGGTTATGAAACATGTGTTCATTTTGAACAAATCTTCAGTTGTGGTGGATTAAATTGGTAGAGCCTGGTTTACATTGCTTTGTGCTAAAAACAAATTTGAACTGGTAGCAATCTTGAGTATTTTTTTTAATCTTTTGCTCGACCAATCGACTGCCTGGTTTTGCATACCTGTAGTAACCTTTATTTACTAAAGTAAGTTACAAAATCAGGGTTCTCTTTGTTCCTTTCTATAAAGTGTATTTGTTTTTTAATAAAATTTTACTTCCTCTGCTAGTTCTCCTTAATTATAATTATTTTGGTACGAAGGGAGTACAATGTAAGGTGTGTTTCTTGTAAATCCTTNAATTTTTTTATAAGCCCTAAAAAAG | |||||||||
gi|57831313|gb|CX632526.1|CX632526 GBN002L13f GBN Hordeum vulgare cDNA clone GBN002L13 3-PRIME, mRNA sequence ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): GCAGGTACTCCCTCTTCGGGAACATGAAGAAGTCGCCACCCAAGCCAGCAGCCACCACTCACAGGAGCAACTTGTGATAGGTGCCTCTGCCTGCTCCTAAGTACCAAGGAAATGTGTTCTGAACGGCCGCCTACTTCTCTCTTATCAGTTCCGCTTGTATATGTAACCTTGATTCAGAGGACGATGTACTATGTACTGTATGACGTAGTATTATGCAACTCAACTTTGGAGCGGCCGCTGCGGCGACTAGGGACTAGCCAAACTCTAGCACCAGAATGGGCGGTAGCGGGGAAGGAGCAGTGGTTTCCGGGGTACTTGGGGGAAAGGAGGAAGAAGCAGAGGAGGATTGATTAGCAGGGGATTTTAAATCACAAGGTTGTTTTTGCAAAACAACAAATGAACTAAGTCTTGGATATTCTTTTTCGGACGAAGGGAGTATGAGTATTTGTTATGCCCTGTTGTGCCATGGTGATTTATGTATAACCGAAATTCGGAATGAACTCAAAGTTGGCATGTGCAAGTGCGTGCAATATTCTCAGGAGCAATTTCTCAATGTTGAATG | |||||||||
gi|32153003|gb|CD662603.1|CD662603 UCRHV18_02ca06_b1 Drought-stressed Dicktoo barley epidermis cDNA library Hordeum vulgare subs ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTGACGAAGGAAGTGGTATATATATATATAATAAGAGCACAATTTCCTATACATATGTTCCACCCCGGCTACTTAATTACGCTACATCTGCATAAAAATCATGGATCGTCATTCGAGTCGCAACAGGAATCCTCACTGTCTTGTGCTCCTTGCGCCAAGTAATGCTGCCAAAGGTGTAGTCCCCTTGCAGCTTCCACATTGGTGACAACTTCACCTTAAATGTATGAACTTTGTTCATGGCGTCGAACACGAGCACTATTGGTTCAACCTCCATCCTGACTCCAGTAGGACTCTGGACTTGTGCATGATACACAGAATCAACCTTACCGACGTTTGTCACTGTCCTCCACAGTGTGATCGGACGCCTCAGCTCAGGCACCGCAATGGACGGCAGGTTCAGGTGGTATGCTGGTAGGGTCGTCTCGTCGCAACTCACGGTCGTCCTCCTGATGATGGTGCACCCAAAGAATTTGTTGTACTCACGGGGATCAATGTCGTAGACAAGGCCGGGATCGGCCGCGCCTCCGGGGTTGATGTTGCCGCCACCATAGTCGAACGGGTCGGCGGTCTTCCGACTCAGCCCTTCCGCCAGTATCGGCATGCCACGCTCGTCCGTTATATGGGCTGTGGTGATGATGGCTGATTCCTCGTGC | |||||||||
gi|161467322|gb|EX574995.1|EX574995 HDP18H17w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP18H17, mRNA sequence ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): GGGGATGACAGTGACATTGTTGAGCATATACCTGACATCCAGAGTTTTGACTCCTTCAATTCTGAAGCAGTTAAGAAGATGGTTCTTCTGCCACATCTTGCAAAGAAGTATGGCACAGGCTGGTGGGAGCTTTGTTAAGATATCTTGATACTCCTTTCATCCCAAAATAAGTGTCTTAACTTTGTACTAACTTTAGTGCAAAGTTGTACTAAGCTTGAGACACTTATTTTGAGACGAAGGGAGTACCTATGTTGGTTAGGGTTCTACCCACCCCTGACATGTAGATAAAATTGGAGTTCAATTTGTATGATATGATTGTAACAACCTTAACCGTGCAATGTAAGTACAAGTGGACACCTACGGTACGTAGATACGCTTCCCAACATTTTCATAAGCTCCGGGCAGGAGATATATAGTTCTTGTGCAGGGCAATCACTTGCCCCACTGCATGGAGAGGAGAAGCATGCATGTGTGCTGTAATTCAAGATTTCTCTTGCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAGCATTCGTGAGCCAGAGGACGAGACAAGGGGGAGTTAACATTGCGCAGTGTGAAGGTGCAACATAAGGAGTCAGATAGAGTGCATACTGTTCTCCACATCCAGCACTCCACATGGCCTGACCATGGTGTGCCAAATG | |||||||||
gi|94334682|gb|BY868487.1|BY868487 BY868487 Seminal root Hordeum vulgare subsp. vulgare cDNA clone bart41f09 3', mRNA sequence ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): GTCGTCGCAATCGCTTTGGTCTGATGTGTGGGTGTTTACATTCTGTATGTTATTCAGTCAGTGTAGCTTGTACTGATTTCATGTGAGCAAGTCTTTATTTACTTTGAATCATTTGGTATTCAAAGGTGGAGTCGCCCACCTATGATTCTGTTGATTTTGTTTTGCCTTGTGCTTGGACGTCGAAACGAATTTGAGCATCTCATCCTATAAAAGCTAACAGGGTGCTCAACAATATCGCTACCTCCTTTCTGGTTATATAAGGCTTACACGTACAGTACATATTATTCCCTCTTATTTTGGGACGAAGGGAGTATAAGTTACATTACCTCTGTCCTAAAGAACTGTCTTAGATTTGTCTAGCTATGTATGTATCTAACGCTAAAATGTATTTGGATACATCTGTGATGTATTTAGACAAATGTATGACAGAGCTTTTTGGGATGGAGTGGAGTATGTTGT | |||||||||
gi|30601761|gb|CD057695.1|CD057695 HO15O12S HO Hordeum vulgare cDNA clone HO15O12 5-PRIME, mRNA sequence ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): CGGCACGAGGCTATAGTAGAATCTCTAAAAGGTTTTATATTTAGGAACGAAGGGAGTATACGATATATAGGAGAGAGTATAGACAATCTGCTGGAAAACTAGAAATTTTGAGAGGGAATCGTTTTGGACCATTGTCTATATATATATATATACACACACACACAAGCTGCTACAGATGCTCTTACCTCTTTCCTTGCTATAATAATTGAGTGCATAACAACTCTTACAGGTGACAACAGGGATGGCTACCGGTAGCGAAGCTGGAAAGTCCGCCGAGGCCGTGCTGGAATGGCCTAAGCAGGACAAAAAGAGGATGCTGCATGCTGTTTACCGTGTGGGAGATCTTGACAAAACCATTAAGTGTTACACAGAATGCTTTGGGATGAAGCTGCTGAGGAAAAGAGATGTCCCAGAAGAGAAGTACACCAATGCGTTTCTTGGGTTTGGACCTGAGGATACTAATTTTGCACTTGAGCTGACTTACAATTATGGTGTTGACAAGTACGACATTGGAGCGGGCTTTGGACATTTTGCCATCGCAAATGAGGATGTGTACAAGCTGTCTG | |||||||||
gi|24287105|gb|CA009761.1|CA009761 HT12O21u HT Hordeum vulgare subsp. vulgare cDNA clone HT12O21 3-PRIME, mRNA sequence ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): ATTTTTGAACGAAGGGAGTATGTCTTTATTTATTCCTCTATGCCTCCACACAGACAAGGAAAACACTTCCATTTACAGCACAACACCACAACCTGGCCCGCACTTGCCGACGCAGCCTGCATTATTAGTGCGGACGCAGCCTGCATTATTGCCTTATTCGCTACTACGAGCAAACAACACAGGGTGCTGAAAGTTTAGGGGCGGGTGGTACCTTACACTACATCCTGATCACTATACAGGGATTCATCACCTCTACTCGCAATAACATACTCGACAAGCGGTGATTCACATACGGCACGCAGCCTATTACCACAACAACAGCAGGGCAGCGAGGCAGAAACATCACGTGAGAACACAGCACACCGTAGCTAAATCACTTGCTGCTAT | |||||||||
gi|16295058|gb|BI951809.1|BI951809 HVSMEm0003A03f Hordeum vulgare green seedling EST library HVcDNA0014 (Blumeria infected) Hord ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): CAACAACTTCTCATCCTTCGTCAGGCAGCTCAACACATACGGATTCATAAAAGTTGATCCAGACAAGTGGGAATTTGCAAATGAGGGTTTTTTGAGAGGACAGAAACATCTCCTGAAGACCATCAACAGAAGGAAACCATTGCATGCAAACAACCAAGTGCAAGTGCAACAGCAGCAGCACCAGCAGCAGCATCAGCAGCAACCCCAGTTGCAGAATGCGCCAATACCTTCTTGTGTAGAGGTGGAGAAGTTTGGGATGGAGGAAGAGATTGAGATGCTGAAAAGGGATTAAAATGTTCTGATGCAGGAGCTTGTCAAGCTGAGACAGCGACATCAGACCACTGACCATCACCTGCATACTTTGGGCAAGCGTCTTCATGGAATGGANCAACGGCAGCATCAAATGATGTCTTTCCTGGCTAAAGCAATGCAGAGTCCTGGCTTTCTAGCACAGTTTGTACAGCAGAATGAAAACAGCATACGATGAATATTCACTGCCAACAATAAAAGGATGCTACCTAACCAATATGATGGCCTGAACCCTGAAAGCGCATTGTTGGATGGCCAGATTATCAAGTATCAGCCTATGATCAATGAAGCAGCCAATGCAATGCTGAGGAAGATCCTACAGCAGGATACCTCCCCACACAGATTTGAATCCATGGGCAATTCAGAATCATCTGTTACTGGAGAACTGTGTGCCAAATGCTCAAACTTTTGACAGTTTTCATCAACCCGGAGTTCTGCATCACCCTTTCCAGAGGTCCAGGGAACTCGGCATGCCATATTTGCCCCAACTTTTGATTTCACCATTTGTTCTTGTAAACACCCCTGAATATGAGGCCTCCATTTGGAAGCAATCTGTCCACAAATTTCCCCATATGGATGGTCTTTGTTCCAAGGGGTTCGCCCGTATGAGTACTATTTCCGTTACACATGGTTTTTTTTTGAGGGACTATTTTTTTGGAAAACAGCCGCCCGTGGTATTTCCCCCCGCGGAGAGTTGTTTTTGCCCCCCGCTCGGTAGAAGCACCTACACGCGTGCTCTTTCCGCGGGGTTGCGCGCCCGTTTGGTTGGTCGCGCGGCGGNGGTTGTTTGGGAGGAGGGGAGTATATCCG | |||||||||
gi|94334862|gb|BY877823.1|BY877823 BY877823 Germination shoots Hordeum vulgare subsp. vulgare cDNA clone bastl56b02 3', mRNA seq ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): CTCCGAGTACGACGCCGCCCCGCTGCTGCCGGCAGTGCGAGGGGGCAGCCGCCGGAAACGGCTCTCCGACGCCGCTGATGGCAAGGGTAGCTTCGACGACGTCGTCTTACGAAACGCCTAAGTGACCTCAGAATATAGTAGTACACGGTACATTAGTAGTATTCCGTCCAAAATAAATGTCACAGATTTTGTACGACTAAATTAGTACTCTCCCCGTCCTAAAATAACTGTCTAAAGCTTAATACAACTTTGTACTAGAGCTAGTACAAAGTTAAGACACTTATTTTGGAACGAAGGGAGTACAATTTGTATACTAGGTCAACGACATTTATTTTGAAATATAAGACAGTGCAGTTCCAT | |||||||||
gi|32154972|gb|CD663573.1|CD663573 UCRHV18_05dg06_b1 Drought-stressed Dicktoo barley epidermis cDNA library Hordeum vulgare subs ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): TTTTTTTGAACGAAGGGAGTATGTCTTTATTTATTCCTTTATGCCTCCACACAGACAAGGAAAACACTTCCATTTACCGTACAACACCACAACCTGGCCCGCACTTGCCGACGCAGCCTGCATTATTAGTGCGGACGCAGCCTGCATTATTGCCTTATTCGCTACTACGAGCAAACAACACAGGGTGCTGAAAGTTTAGGGGCGGGTGGTACCTTACACCCTCGGGC | |||||||||
gi|21165427|gb|BJ486994.1|BJ486994 BJ486994 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): CCGATTCGGTCGGCACAGTCAACCCCGAGGCCCTGGTTGGACAAATAGTGGGACACGCCGATCAGGAAGTGTTCAAGACAATAACAAGCAGTTACTACTTACTAGCGGGGAGTTCATGGAATCACTGCATTTGTAGAATCATTAGGAATGAATTTTCTTGCGAATTATGCTAAGGATCCATCAATGTGGAGAGAACTTTCATAAATATGTCATTAGAAATCAAGAAAAAAGTAACCAGGAACTTCTCACTTTTAGAGGCCCTTTTTCTTCCCAGTTTCTTTGAAGTGGCGGCGAGGAAGCAGCCCTCGATTGGGGCCATGGTGCTCTGTCGGCGGGCTAGGAACAGCGGCGACTAGGGACTAGCCAAACTCTAGCACCAGAATGGGCGGTGGCGGGGAAGGAGCAGTGGTTTCCGGGGTACTTGGGGGAAAGGAGGAAGAAGCAGAGGAGGATTGATTAGCAGGGGATTTTAAATCACAAGGTTGTTTTTGCAAAACAACAAATGAACTAAGTCTTGGATATTCTTTTTCGGACGAAGGGAGTATAAGTATTTGTTATGCCCTGTTGTGCCATGGGGTTTATGTATAACCAAAATTCGGAANAACTCAAAGTGGCATGTGCAAGTGCGTGCAA | |||||||||
gi|21159440|gb|BJ480972.1|BJ480972 BJ480972 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): GGTTCCTAACATCTGCATTCCACTACTACACGAGNAAAAGGCCGACTAGCAAATACTCCCTCCGTCCAAAAATAACTGTATCAAGCTTAAAACAATTTTATACTAAAGCTAGCACAAAGTTGACACACTTATTTTGGGATGAAGGGAGTAGTACTCTCTCGGTAAAGAAATATAAAAGCGCTACTAGCACATTTTTTTCAGGAGTACTCCGTAGTACTCTCTCGATTCAGTTGTTTGTTGAAATCTTGAAATCATCCAGCAAGTCAGCAATTGCTGCCGATGAGGATCCACCCATCTCCAGCGCATTGGCAGCAATCTCTTTCGCCATCGTCATCCTCTGCCTGATCTCCTTCCCTTGCTCAGACTCCATGACCAGTCTCACCTTCGCCTCTACCTCCTCCGCTTTCACCATCACCTCGTCGTAGCCGTTCATGGCCACCCCAAGCTTCATCTCCTCCACGACGAACACCTTGTTCATCCTCTGCTCCGCGTACATGGGCCAGCACACCATGGGCACCCCGG | |||||||||
gi|24241507|gb|BU990561.1|BU990561 HF25G17r HF Hordeum vulgare subsp. vulgare cDNA clone HF25G17 5-PRIME, mRNA sequence ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): CAAACGAAAGTGGGCAGTGCCAGAAGACATTTTACCCATTCTGTGGTGTTCATGAAGAACTGAAAGCATTTGTCCATGACATGGTGCAGGCTAGCAAAGATGGGGATCACGAGGCTGAACCCCGCAGTTCTTATGTCGAAGGTGCTCGTGATGTTGCTGTTTTGGAAGCCATGCTTGAATCTAGTGCGAAGCAAGGAGCCATGGTGCATGTGAAGAAATTCTAACAAATCTCAATTAGCAAAAGGAGGAACGTGAACATTCTTCTGCTAGAGTGATGGTCCGGCAGGACGCGAACATTTGTAGCATCGGTGACAAAAGGAACATCATTTCATGATTATTCCATTGATGGTGTAGGATAGGATGAAAGTCAGGCTGCTCCCTGGAACCATCATTCTTTCACACAGATCTATACGACAGCTGCTACAGATTTATTTACCCATATACTCCCTCCGTCTTAAAATAAGTGTCACAAATTTAGTATTAAGTTAGTATAAATTTAGTACTAAAACAGCGACACTTATTTTGGGACGAAGGAAGTACTATCTATAACGTATACTCTTGCTACTGATCTTGTATACCATTTCTTGCATTNTCTGTTGAGGAAAAAAAATACTTTTGCTTGTTGTTTT | |||||||||
gi|21147218|gb|BJ468714.1|BJ468714 BJ468714 K. Sato unpublished cDNA library, cv. Haruna Nijo germination shoots Hordeum vulgare ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): AGAGCATCGCTGTTGTTGGTGGTGCTGATGGTACAAGCCCTTCAAGAATGAGAGCATTTATAAATAGAGAAGGTATTGACTTTTCTGATGCTCAAAACATGCAGCCTGTGCAGGAATGGGAACTGGCAGAGAATTTGCAGGGTGTTCTTGAGTATCAAACCAGGTATTCAAGGTTCCAAGGTGTGGCCAACTTAACTCTGCATTTTCCTGATAACTTTGGTGGTGATACGACTAAGATATATTACATTGGGTTGCGTGGTGAAGCTACTCAGAACAAAAGGGATGTTGTGGCCACAATTGTGTATGAAGTAATGCCCAATCCGTCTGATCATAAAATCCGAGACTGGAGGTGGTTTCTCACATGTTGAGTAGGCATGTCAGTGACATGCTTCCTCGGCAGATCCATGTCTGGCCGCTGTTCTCAGGTTGGAGAGAAATTTGAGCTCTGATGAGTTTTGTACGAATAAAACCGGTCCAGCTTGAACATTCGTAGTTTTGAGTGTAAACCAGCGTATGTGTCGGTTCTCAATGGCTTGATGATGTAACTTAACTATGTCGTGTCGGTGGCTCGATGAGGTTATTTAACTATGCCGCCTTGTCGTTGCCAACGCTGTCATCAGTCGCTAACAAGTACTCTCTTTGTAAAGAAATACTCTCTTCATTTCAAAATAAGTGTTTAAGTATAAAGTTGTGACACTTATTTTTGGGACGAAGGAAGTATAAGTATTGTTTAGATCACTATAAAATAA | |||||||||
gi|32154974|gb|CD663574.1|CD663574 UCRHV18_05dg07_b1 Drought-stressed Dicktoo barley epidermis cDNA library Hordeum vulgare subs ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTAACGAAGGGAGTATGTCTTTATTTATTCCTTTATGCCTCCACACAGACAAGGAAAACACTTCCATTTACCGTACAACACCACAACCTGGCCCGCACTTGCCGACGCAGCCTGCATTATTAGTGCGGACGCAGCCTGCATTATTGCCTTATTCGCTACTACGAGCAAACAACACAGGGTGCTGAAAGTTTAGGGGCGGGTGGTACCTTACACCCTCGTGC | |||||||||
gi|24218988|gb|BU968195.1|BU968195 HB06L16r BC Hordeum vulgare subsp. vulgare cDNA clone HB06L16 5-PRIME, mRNA sequence ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): CGGCACGAGGATCAACTTCAATGTTCCCAAGCATGGAAAAATACTCATTTGGCTGGTCACTAAATGACACAGTTGGCCCGCGGATGCTTGACTTTAGTAACAAAAATAGCAGGACATGCCACAAAAATATCCGAAAATGAAAACTACACTTTAGGGGGAAATTCAGTTCCAGTTGTTGAAGCAAGGCCAGGGACTGTAAGCATGGTTGCAGGAGCCAAAACCACTCTTAAGCCAGGTCAAAAGCCGAATGATCATCCGAAGATGCTTCATTCCACTAAATTTTCAGTTGGTATAGTGGAATCTTCAGAAAGAAACAGTGGAGTGTTCCTGTTCCGCTTACAGTTCTGGAGCTTTTTTAGTACTCCCCCGTTCCAAAATAAGTGTCTAAACTTTGTACTGATTTTAATATAAAGTTATACTAAAGTCGAGACACTTATTTTCGGACGAAGGAAGTATTTGAGTAGTCAGCAAAAGGGAAGCTGAAGT | |||||||||
gi|166069305|gb|FD519194.1|FD519194 RUS36H09w HB (Hordeum vulgare cv. Barke) Hordeum vulgare subsp. vulgare cDNA clone HB12E13, ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): AAAAGATCTTATATTTAGGAACGAAGGGAGTATGTATGTAAGTACATGGTGCAGTTGCTACTCCTCAGTACGTATCCCAGGCCGTATAACTGAACTGCTTTTACAGATGTAGCCATTCAGTCTCGCTGAGAGAAGAAGAAAAACCAGAGAGAGACATAAGCTACGTACGAAAAGTTAACAAGGACGGTCGCTACTACTAGTACGATTCAGGACTTCAGGCGGTGGCGACGGCTCGGGAGGCCGGCGTCGGGGAGGGCGGCAGGCGCGAGCTGAAGTTTCTGTGCTGGAAGGCGGCGTCCTCCGCGTCGGCGTCGCCATCGTCGCTGCCGCCGTCGTCGAAGTTGAGCGCGTAGCTG | |||||||||
gi|30053876|gb|CB859318.1|CB859318 HI10B14w HI Hordeum vulgare subsp. vulgare cDNA clone HI10B14 3-PRIME, mRNA sequence ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): ACAATCTTTAAAAGATCTTATATTTAGGAACGAAGGGAGTATGTATGTAAGTACATGGTGCAGTTGCTACTCCTCAGTACGTATCCCAGGCCGTATAACTGAACTGCTTTTACAGATGTAGCCATTCAGTCTCGCTGAGAGAAGAAGAAAAACCAGAGAGAGACATAAGCTACGTACGAAAAGTTAACAAGGACGGTCGCTACTACTAGTACGATTCAGGACTTCAGGCGGTGGCGACGGCTCGGGAGGCCGGCGTCGGGGAGGGCGGCAGGCGCGAGCTGAAGTTTCTGTGCTGGAAGGCGGCGTCCTCCGCGTCGGCGTCGCCATCGTCGCTGCCGCCGTCGTCGAAGTTGAGCGCGTAGCTGAGCGGGTCGTACCTGAACTCCCCCGCGGCCGACCCGCGCCGCCTCCACCTGGTTCTGCCGCCGCCGGTGTGCGGCCTCTCGCCCCCGGGC | |||||||||
gi|13089612|gb|BF627252.2|BF627252 HVSMEb0004F19f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hor ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): CGGAGTCAGGGCGGAGGCCCTCCTTAAGCAGGTCGACTACCTGATCCGCTCCAAGTGGGTGCCTTGCCTCGAGTTCACCAAGGTTGGGTTCATCTTCCGTGAGCACAACGCATCTCCTGGGTACTACAATGGCCGGTACTGGACAATGTGGAAGCTGCGGGGGGGCGGATGCACCGACGCCACACAGGTGCTCAACGAGGTGTAGGAGGTCAATAAGGAGTGCCCTGACGCGGGTGGGGCGGGTGATGGGATGGGACGGCGTGCATGAACTTCGAGACGAGGGGTGGCTGGGGAGGGACACTGCGGCTGTGGGATTGCTTATAACCTATGTGAGGGTGAAGAAAGGGGGGTTATGGAGGCGAGAATTAGAGTAGAGAGAGGTGGTTGCCGTTATATTTTTTTAAGGGGTGAAGAGGGAGAGGAGGAGGGGAAAGGGGGAGAGGGTGGAAAATAGGGTGGTGAGTGTGTGGTCGGAGGAAAGGGATTTAGTAGAGAATAAACGAGATGCGTAAGAAAGTTTGTTTGGTGGAGGGGGGGGGTGGATGTAATGATAATAGGTGAGGGTTTTGTGCGCGCGGCGTAGGGAAGGCTGGTGGGGTGATATAGGGGTTGAGGGGTGTAGGTAGGTTTGCTGGAGGGAGGAAGAGGGAAAGATGGGGTGGCGGTATATTGGAGAGAGGTTTGTTTGGTGCGAAGGGAGTGTCCGGAGAGTGGGAGGAGTGGGGGAAGAT | |||||||||
gi|217050262|gb|GH214592.1|GH214592 HVSMEf0002O06r2 Hordeum vulgare seedling root (etiolated unstressed) cDNA library HVSMEf (HV ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTAAACAACGGAGGACAGACCAAATCTCCTGTAAATGTAAACCAGCATCTCTTTGTGGCGAAGGAATTATATGAATAGATGCACCCAACTAGCTAAGAACAGATCAATCTCATCCAACACACAACAGCTTGAAACAAACAATTCATTTGACATGAACGGCGAAGTAGGCAATCAAGTAAAGGTGGGAGTAACGAATCACCCTAATGATCATAGCCTGAGAGACAGGTCCATTCCCTCGTCGACGGCGCCGTAGCCGTACTCCGACGGCCCCTTGGCGCGCTTGCGCGCCATGCCAGCAAGCATCGGAGCAGCGGCCTTCTGCGGCTCCGTCCTCCTCGCCTTCGCAGACGTGAAGTCGCTGTCGCCGGCGTACCCGCACGGCCTTGCGTCCTGCTCCTGCGCCGCGGCAGGCGGGGC | |||||||||
gi|21276524|gb|BQ468742.1|BQ468742 HM02D04r HM Hordeum vulgare subsp. vulgare cDNA clone HM02D04 5-PRIME, mRNA sequence ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): CTCTGCATTTTCCTGATAACTTTGGTGGTGATACGACTAAGATATATTACATTGGGTTGCGTGGTGAAGCTACTCAGAACAAAAGGGATGTTGTGGCCACAATTGTGTATGAAGTAATGCCCAATCCGTCTGATCATAAAACAGAATCCGAGACTGGAGGTGGTTTCTCACATGTTGAGTAGGCATGTCAGTGACATGCTTCCTCGGCAGATCCATGTCTGGCCGCTGTTCTCAGGTTGGAGAGAAATTTGAGCTCTGATGAGTTTTGTACGAATAAAACCGGTCCAGCTTGAACATTCGTAGTTTTGAGTGTAAACCAGCGTATGTGTCGGTTCTCAATGGCTTGATGATGTAACTTAACTATGTCGTGTCGGTGGCTCGATGAGGTTATTTAACTATGCCGCCTTGTCGTTGCCAACGCTGTCATCAGTCGCTAACAAGTACTCTCTTTGTAAAGAAATACTCTCTTCATTTCAAAATAAGTGTTTAAGTATAAAGTTGTGACACTTATTTTTGGGACGAAGGAAGTATAAGATTGTTTAGATCACTATAAAATAATGATCAAAACTGTCT | |||||||||
gi|21162725|gb|BJ484277.1|BJ484277 BJ484277 K. Sato unpublished cDNA library, strain H602 adult, heading stage top three leaves ATACTTCCTTCGTCCCAAAAA EST sequence (targeted fragment marked with yellow): TGCTTAAGATCAAGNAGAGGGAGAAAGCATTATTACTGTTTGAGGAAATGAAAGATTCAGATGACTGTGAACCAGAATCGTGTACATATAGTCTTATGATTCCATGTTTTGTGGATGAAGGAAATATTGAAGAGGCTTGCTCATGCTACAACTCCATGATGAAGGCTGAATGGATACCAAGTCTTTCAGCCTATCGTTCTCTCGTGAAAGGGCTATGCAAGATTGGAGAGATAAATGCAGCTGTTTCACTCGTATCAGACTGTCTTGGAAATGTAGAGAATGGGCCAATGGAATTCAAGTATGCCTTAACTGTTATTGAAGCTTGCAGGTCAAAAGACCCGGAGAGGGTCATGAAAGTGGTGGTTGAGATGATTGAATTAGGTTATTTAGTAGAAGAACTTATCTTCTCTGCTGTCATCTATGGATTCTGCAAGTATGCAACTTCAACTGGAGCTAGAGAGGTGTTCTCTGTTATGGCAGACAGGGATATTATTTCGGAGGCTAATTTTATTGTTTATGAGGATATGCTAAACGAGCACCTGAAGAAGGTCACTGCAGACTTGGTGATATCTGGATTGAAGTTCTTCAACCTTGAATCAAAGTTGAAATGGACAAGCAGAATTGATTGAAATATATTTGTACAGTTACTAGGTACAATCTGTTTATTTTCACTTTGGGTTTGTGTCGCTTAAATATAAGATTGTTTTGATACTTCCCAATAGTTTATGCATCATTTAACAAGTACTG | |||||||||