| mature miRNA: ATAGGCCACATAGCACCTTG species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73881443|gb|DT484181.1|DT484181 WS02524.B21_K21 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02524_K21 3', mRNA sequence ATAGGCCACATAGCACCTTG EST sequence (targeted fragment marked with yellow): GATTCAGTGTGTTATAAACTTCAAAGCTTGCCAGAGGAAGGTCTTCGTAACCTCATTCCCTTGGAGGTTTTAGACATACATGATTGTGGAAGATTAAATCTTCTGCCAATGAAAGGGCTATGTGGCTTATCTTCTCTTCGTAAGTTATTTATTAGAAATTGTGATAAATTCACATCTCTATCCGAGGGAGTGCGACATCTGACGGCACTTGAGGATTTGTTGCTTCATGGATGTCCAGAGCTGAATTCATTGCCAGAGAGTATCAAGCATCTCACTTCTCTCCGATCTCTACATATACGGAACTGCAAGAGATTAGCTTCTTTGCCAAATCAAATTGGATATCTCACGTCCCTTTCACGCTTGGCGATTGGGGGTTGCCCTAATTTGGTGTCTTTACCAGATGGGGTGCAGAGTCTCAGCAACCTCAGCTCATTGATAATTGAAACTTGTCCAAAATTAAAGAACAGGTGTAAGAAAGAGAGAGGAGAGGACTGGCCTAAGATAGCTCATATTCCTGAGATTATAATATACTAAAAATGAAGGTAATTTCTCCGATAGCAGTAGTAAGCTCTCTTTCAATTCAATATTTTAGATTTACACACACACATATCTGTGTTTTCTCTTATGGTTATTGGCTGAGGTTGCTTCATGAATAATTGATTTCAATTATATTTTGTAATGCTCGTTTGTTAGGAATTCCACAATCTCTACATTAGAAATAGATAATCTGTACAAATTTACTTTCCTTTTGTAATGCCTAACTATATTTCAATGTAGTAATTGAATCCTAATGGAAAGGAAAGTCTGGAATCCTGCTTGTATAAATACATGAAGAGATCAATGATAATATTACTCCAGCAGATTCAATTTCTTTGCCTCAAAAAAAAAAAAAAAAAA | |||||||||