miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: ATCCAACGATCGGAAATGATT
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|41881477|gb|BX927433.1|BX927433 BX927433 Oryza sativa library (Han B) Oryza sativa cDNA clone p439g08p3, mRNA sequence

ATCCAACGATCGGAAATGATT
|||||||||||..||||.|||
TAGGTTGCTAGTTTTTATTAA

EST sequence (targeted fragment marked with yellow):
AAGTGAGTCGAANTGGGCGATGTTAAGCTTGTCGAGTCTAGAGTGACTGGGTCGAGGGGCGACATGTTTTATTATATTTTTTTTTTTTTAGGAGATTTATTTGGATAGATAGGGATGTAAATTAAGCAGGTTGATCGATCCCAAATACTAATACGTGCGGTACCAAATTATTTTTGATCGTTGGATATATTAATATCCATCATATCCAACTAGATCCAATGATAAAAAACAATTTGATACCGTGACATACGGTATTTTTGTTGGACCTTAGCAAATCTCAAATTAAGCAGGTCGATCACAAGGTGCGGTCGTCGTCAGCAGGCGCCACGGCGGAAGCCGACGGAGCCGCCGCCGACGTCGTAGAGCACCTCGTGCGTCTGCTGCTGCACGTTCCCGATGAACCCGAGCGCGAAGTCTCCCGGCGTCGGCACGAACGCGAGGCACCCCTCCACCATGACTCCCATCGCGTCCAGCCTCAACAACGGGCCGCCGTCGAACACCAGCGACACCGCCGGCACCGTCACGCTCGTGAACCGGACGAAGTCGTAGCAGGGGTCCAGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACAGATACCGGGGGCAACAGCTGTCGCGCCCACAGGGCAAA



gi|89182339|gb|CI113708.1|CI113708 CI113708 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati

ATCCAACGATCGGAAATGATT
||||||||||||.||||.|||
TAGGTTGCTAGCTTTTATTAA

EST sequence (targeted fragment marked with yellow):
TAGCAAAACTGTTGAAAACTTTATTATTTACTTTGCTCGAAATACAATATCGACTAATTGGAATATTAGATCATTAATCAGAGCTTGCAACACTGAAACTCTCTATTGCTGAAGTACTCTGATTAATTAACATCCTTCTGTTGCGTCATTGACGCTCCACATTGGTTTAGATCTCAGCATCCAATGTAATTAGAGGTTTGTTATCGTCCAACAAAAAGTATCTCGAAATACCGGTACCTCACGGTACCAAATTATTTTCGATCGTTGGATCTAGCTGAGCAGATGAGTTATCGGTACCGTGAGGTATCGGTATCTCGAGATAATTTTTGTTGGACCGAAGCAAATCTAAT



gi|29626311|gb|CB631322.1|CB631322 OSIIEb08M12.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb08M12 5', mRNA sequence

ATCCAACGATCGGAAATGATT
||| |||||||||||||||||
TAGATTGCTAGCCTTTACTAA

EST sequence (targeted fragment marked with yellow):
GTGGACGCGCTGGGGCTGATCACGATGATCGTGGAGGCGGCGAAGGCGGCTCGCCGGAACAAGCGGACGTGCCTGGAGCTGGCCCGGCTGGTGGAGCAGGTCGGCGACCTACTCCGCGCCCTGCAGGAGCAGCCCGGGGTGACGGTGATGGAGCGGCCGGAGACGAGCGCGCCGCTGAGGGAGCTGCAGGAGACGCTCCGGCGAGCGCACGAGCTCGTCGAGTCCTGCCGGCGGCGGGGCAGCTACCCTCGCCGGCTCTTCGCCGGGAAGGAGCAGGGCGAGAGCCTCCGCGAGGTGCAGAGCAAGATCAGCATCTACCTCCAGCTCTTCCCGATCATCTGCCACATCGACGGCACACGCCTCCTCGTCCGCGTCATCGCCGACGGCGCCGCTGCCGCCCGCTCGCCACGCCCCGAGGTATATATACTGTATGGGATTTGCTCCACTCCAACAAAAAGTAGTTCAAGGTACCGGTACGGCGGTACCTCACGGTATCAAATCATTTCCGATCGTTAGATCTAACAACGATCGAAAACGATTTGGTAGCGTAAGGTATTGGTACCTTGAGATACCTTTTGCTGGACCGAAGCAATTCTTGTATTGTATACATGCATGCGTGTATGAAATTGTGTATATATATACATGTATATATATACGTGTACAAGATTACAAATATTTGGTTAAATTCGTGAATTCAAAAAGGATGAAGAAGATGAAGTGCTCATGTCGCT



gi|88442168|gb|CI560409.1|CI560409 CI560409 Oryza sativa (japonica cultivar-group) root of seedling in anaerobic condition for 3

ATCCAACGATCGGAAATGATT
|||||||||||.| ||||||
AAGGTTGCTAGCTTATACTAA

EST sequence (targeted fragment marked with yellow):
CGGCTATACACAGATGTTTATTGAATAAAAATAGAAGAGAGAACAGTGAACGAAAAAGAAAAGAATCAATATACGGTTCCAGATTATATGAGGAAGAAGAAAAAAATAAATATAATCATCGCAAAAATCGAGAAAAGAAAGAAAACATGAACTAGATNATTGATTATTTTTCACTGTTCAAAAGTTGACTGGCGGTTTTTTTATAAATTAAACTGACGTGTGTAATCATATTCGATCGTTGGAATGACTGCTTGTACAAATTTGAGAAAAATCATGATATACATATGTACTTCGAGTTCTTTGCCGGATTCTGCTACCATTTGTATAAGTTTTTTCATCACATCCGCATGACGACATGGATGAATGCTTGGCATCGGACCTGTACCAGGTAAATGCGGA



gi|86503611|gb|CI146244.1|CI146244 CI146244 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa

ATCCAACGATCGGAAATGATT
||||||||||||.||||||||
TAGGTTGCTAGCTTTTACTAA

EST sequence (targeted fragment marked with yellow):
CGGTACCAAATCATTTTCGATCGTTGGATATATTAATATCCATCATGTCCAACTAGATCCAATGATAAAAAAACAATTTGATACCGTGACATACGGTATTTTTGTTGGACCTTAGCAAATCTCAAATTAAGCAGGTCGATCACAAGGTGCGGTCGTCGTCAGCAGGCGCCACGGGGGAAGCCGACGGAGCCGCCGCCGACGTCGTAGAGCACCTCGTGCGTCTGCTGCTGCACGTTCCCGATGAAGCCGAGCGCGAAGTCTCCCGGCGTCGGCACGAACGCGAGGCACCCCTCCACCATGACTCCCATCGCGTCCAGCCTCACCACCGGGCCGCCGTCGAACACCAGCGACACCGCCGGCACCGTCACGCTCGTGAACCGGACGAAGTCGTAGCAGGTGTCCAGCCCGGNCCTCCCTCCCGCCACCCGCGGGTACGCCGCCATGGCGCTCCGGAACGCCAGCCGCAGCGCCCTGTACGCCGTCGGCGGCAGCTGCGTGAT



gi|89174219|gb|CI042112.1|CI042112 CI042112 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

ATCCAACGATCGGAAATGATT
|||||||||||||||||.|||
TAGGTTGCTAGCCTTTATTAA

EST sequence (targeted fragment marked with yellow):
TATTGAATATATGCTGAACCTTCTTGATTCGGGAATACAATTGGTCGATTACTGATTAGAGCTGGAATCGTTGAAGTTTCTTAATAGAGATTTGCTCCGGTCCAACAAAAAGTACCTCGAGGTACAGGACCTCACGGTACCAAATTATTTCCGATCGTTGGATCTAGTACTGTGAGTTACCGGACTACCGGTACGTCGAGGTACTTTTTATTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTTTTTGTTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTTCTCCAATTTGGCGGTAAAGCGTTACAGGCAACTGGGAGGCATGAGGACACCGGAGGCCGTGCCGTCGGCGTGTTGGCAGGTCGCCTCCGCCGGCTTGCCGCCGTCGAACGTGAGCTTGATGTCCTGCAGGC



gi|86488815|gb|CI131448.1|CI131448 CI131448 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage and Panicles two

ATCCAACGATCGGAAATGATT
||||||||||||.||||||||
TAGGTTGCTAGCTTTTACTAA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTGAAGATTTATTTGGCATAGATAGGGATGTAAATTAAGCAGGTTGATCGATCCCAAATACTAATACGTGCGGTACCAAATCATTTTCGATCGTTGGATATTATTAATATCCATCATGTCCAACTAGATCCAATGATCAAAAACAATTTGATACCGTGACATACGGTATTTTTGTTGGACCTTAGCAAATCTCAAATTAAGCAGGTCGATCACAAGGTGCGGTCGTCGTCAGCAGGCGCCACGGCGGAAGCCGACGGAGCCGCCGCCGACGTCGTAGAGCACCTCGTGCGTCTGCTGCTGCACGTTCCCGATGAAGCCGAGCGCGAAGTCTCCCGGCGTCGGCACGAACGCGAGGGACCCCTCCACCATGACTCCCATCGCGTCCAGCCTCACCACCGCGCCGCCGTCGAACACCAGCGACACCGCCGGCACCGTCACGCTCGTGAACCGGACGAA



gi|88225601|gb|CI225517.1|CI225517 CI225517 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s

ATCCAACGATCGGAAATGATT
||||||||||||.||||||||
TAGGTTGCTAGCTTTTACTAA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTGGTCTCGAAGTTTAATACATAACTTACATCGAAGTTTAATACATAACTTACACCATAGTTATATAGACAATGCACAGAACCTAATAACGTTATAGCACGTTATGAATAAAAACATGCATTTTGAAGATTTATTTGGCATAGATAGGGATGTAAATTAAGCAGGTTGATCGATCCCAAATACTAATACGTGCGGTACCAAATCATTTTCGATCGTTGGATATATTAATATCCATCATGTCCAACTAGATCCAATGATAAAAAACAATTTGATACCGTGACATACGGTATTTTTGTTGGACCTTAGCAAATCTCAAATTAAGCAGGTCGATCACAAGGTGCGGTCGTCGTCAGCAGGCGCCACGGCGGAAGCCGACGGAGCCGCCGCCGACGTCGTAGAGCACCTCGTGCGTCTGCTGCTGCACGTTCCCGATGAAGCCGAGCGCGAAGTCTCCCGGCGTCGGC



gi|88290298|gb|CI550520.1|CI550520 CI550520 Oryza sativa (japonica cultivar-group) root of seedling 6ppm CdCl2 for 3 days Oryza

ATCCAACGATCGGAAATGATT
||||||||||||.|||.||||
TAGGTTGCTAGCTTTTGCTAA

EST sequence (targeted fragment marked with yellow):
GGTCAAAAGTCAACAACATTATACATTAAAATACGGTGGGAGGACCTTATTGAGTAACGTTACAAATGCTGAGCCCCACTAACTTATGTGAGCCGGCCACAGATACATGTTTAGCTGTAGAGGCTAGATTTACTTTTATAATTGAGATTTGTTCTTGTCCAATCAAAAGTATCTCGAGGTACTGGTACCTCATGGTGCTAAATCGTTTTCGATCGTTGGATCTAACAATGTCTATCTTACCCAGTTAGATCCAACGATCGAAAACAATTTAGTCCCATGAGGTACCTCGTGGTACTTTTTGATGGATCTAAGCAAATATGTTATTACTCCCTCCGTCATGGATATGCTTGCAAATGGAACAACAGCCGCCGCAACACGGATGTGCGCACACGAAGA



gi|88834861|gb|CI370164.1|CI370164 CI370164 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

ATCCAACGATCGGAAATGATT
|||||||||||||||||.|||
TAGGTTGCTAGCCTTTATTAA

EST sequence (targeted fragment marked with yellow):
AGTAGTCGTCAGACCCGATAATTTGATTGTCATTCCCTAGTTGATTTATTGAATAATAATGCCTGAACCTTCTTGATTCGGGAATACAATTGGTCGATTACTGATTAGAGCTGGAATCGTTGAAGTTTCTTAATAGAGATTTGCTCCGGTCCAACAAAAAGTACCTCGAGGTACAGGACCTCACGGTACAAATTATTTCCGATCGTTGGATCTAGTACTGTGAGTTACCGGACTACCGGTACGTCGAGGTACTTTTTATTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTTTTTGTTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTTCTCCAATTTGGCGGTAAA



gi|117225100|gb|CT853006.1|CT853006 CT853006 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

ATCCAACGATCGGAAATGATT
.|||||||||| |||||| |
GGGGTTGCTAGCGTTTACTTA

EST sequence (targeted fragment marked with yellow):
AGAGGCAAGAAGATGGGGGGCACCTTTACAGCGGCGCCCGCACTCGCTCTGGTCTTGCTCGTCGCCCTCTCGGTGGCGGCCACCGCGAATGTGGGGGAATCATGCTCGACGGCGGCGGACTGCGGCGGCGGGCAGTGGTGCTTGGACTGCCAGCCGGAGTTCGCCGGCTCCAGCTGCGTCCGCTCCGCCGCCACCAATCCCTTCCAACTCACTAACAACTCGTTGCCATTCAACAAGTATGCGTATCTCACGACACACAATTCATTTGCGATCGTTGGGGAGCCATCGCACACTGGAGTTCCACGCATCACCTTTGACAACCAGGAGGATACAGTCACTGATCAATTAAATAACGGTGTCCGCGCGCTGATGCTTGATACATATGACTTCAAAGGAGATGTATGGTTGTGCCATTCAAATGGAGGGAAATGCAATGATTTCACTGCATTCGAACCTGCATTGGACACATTCAAGGAAATCGAAGCCTTCCTTGGAGCCAATCCATCTGAAATCGTCACGTTGATCCTGGAAGACTACGTGCATGCACCGAATGGCCTGACAAACGTGTTCAAGGTCTCTGGTCTGATGAAGTACTGGTTTCCCGTGTCGAAAATGCCACAGAAAGGTAAGGATTGGCCTCTTGTCAGTGACATGGTTGCGAGCAACCAGCGCCTTCTTGTGTTCACCTCCATCAGGGTCAAAGCAGGCTACCTGAGGAATCGCATACCAGTGGGAACTCCTGGCCGAGAACAACTACCGGGATGATGGAATGGATGCTGGCAAATGCCTCAATCGTCCCAAAACTGGACCCTTGAATGACAAAACCCAATCCGTAATCCTGGGGAAACAACTTCCCCACGGGCCCCGGGGAAAGGAACCCGATTCCTGCCACCCTTCAAAGGGCCTAATTTACTTGGGGAAAACAGGCCACCGGGCCCCCTTGGGGAAACGGAGGGCTTAATTTCCCTCCCGTTTTTAACCTAATAAAAAAAAAGGGGGGGGGGGGGGGGCCCCCCCCCACCACCCTATTTTTTCTCCCTGGGGGGACCCCCCCCGGGGTGGTGGCCCCCCCCGAGAAAAGAAGGCTTTTTCTCCTCGGGGAGGATTCGGGGTGGGGTATAATTTTTTTTTTTCTTAAGAAAACCACCCGGGGGGGAGGGAGGGAGAATTTTTTTTTTTGTGGGGGGGGGGGGGGCGCCCCCCCCCTCCCCCACCTCAACAAAAAAAAGGGAGGGGTTTTTTGTGTTTTTTTGGGGGTTTGTGTGGTGTGTTGTTGG



gi|86510131|gb|CI152764.1|CI152764 CI152764 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft

ATCCAACGATCGGAAATGATT
||||||||||||||||.||||
TAGGTTGCTAGCCTTTGCTAA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTCTGATAAAAAACAAAAATATCTCAAGCTACCGGCATCTCACGGTACTAAATCGTTTCCGATCGTTGGATCTAACATCCATCCCGCCTAGTTAGATCCAACGATCAGAAATGATTTAGTATCGATACATCGAGATACTTTTTGCTAGATCGAAGCAAAAATCTCTTATACATTATTTGCACGGCACAAGAAGAAGAGCAATTAAGAGATGATGAATACGTATTAATTCAAGCTGGTGGTCTTGCAGTGCCCATCGCCGACTTGAAACTAAGTCCAGTGCATCCACGGAAGAGCTCATGGATGAAGTGTCCCATGGCGTTGCCCGCCAACCCGGCGCAGCCGACGAAGCAGCCGCCGCCGCACACGCATTGGCCACAGCAGCAGCACGGCGGGACGCCGTCGCGACCGAGCGCGCAGGCGAGGCAGAGCTCGCTGTCCGGGCACGTCTGGCACTGGTACGACCACGCCCGCACCAACTGCCTGCCGCCGCCGCCGCCGCCGCCGGCGACGGCGTTGCACTCG



gi|87031223|gb|CI259803.1|CI259803 CI259803 Oryza sativa (japonica cultivar-group) same as Lib 23(supermix) Oryza sativa Japonic

ATCCAACGATCGGAAATGATT
||||||||||||.||||||||
TAGGTTGCTAGCTTTTACTAA

EST sequence (targeted fragment marked with yellow):
TAGCACGGCAATAATTAATTTGTCTCGAAGTTTAATACATAACTTACATCGAAGTTTAATACATAACTTACACCATAGTTATATAGACAATGCACAGAACCTAATAACGTTATAGCACGTTATGAATAAAAACATGCATTTTGAAGATTTATTTGGCATAGATAGGGATGTAAATTAAGCAGGTTGATCGATCCCAAATACTTATACGTGCGGTACCAAATCATTTTCGATCGTTGGATATATTAATATCCATCATGTCCAACTAGATCCAATGATAAAAAACAATTTGATACCGTGACATACGGTATTTTTGTTGGACCTTAGCAAATCTCAAATTAAGCAGGTCGATCACAAGGTGCGGTCGTCGTCAGCAGGCGCCACGGCGGAAGCCGACGGAGCCGCCGCCGACGTCGTAGAGCACCTCGTGCGTCTGCTGCTGCACGTTCCCGA



gi|88906350|gb|CI375422.1|CI375422 CI375422 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

ATCCAACGATCGGAAATGATT
||||||||||| |||||.|||
TAGGTTGCTAGGCTTTATTAA

EST sequence (targeted fragment marked with yellow):
GATTGTCATTCCCTATTTGATTTATTGAATAATAATGCTGAACCTTCTTGATTCGGGAATACAATTGGTCGATTACTGATTAGAGCTGGAATCGTTGAAGTTTCTTAATACAGATTTGCTCCGGTCCAAAAAAAAGTACCTCGAGGTACAGGACCTCACGGTACCAAATTATTTCGGATCGTTGGATCTAGTACTGTGAGTTACCGGACTACCGGTACGTCGAGGTACTTTTTATGGGACCGAATCAAATATCTTGTTACTATCACTAATTCACTATACTATCCGTTTTTTGTTGGACCGAATCAAATATCTTGTTAATATCACTAATTCACTATACTATCCGTTGTATCTTCGTCCATGTGTAAATAGTGAGTACTCGGTTTACAAGAATTGTTTCTCCAATTT



gi|88221529|gb|CI221485.1|CI221485 CI221485 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s

ATCCAACGATCGGAAATGATT
||||||||||||.||||||||
TAGGTTGCTAGCTTTTACTAA

EST sequence (targeted fragment marked with yellow):
GCATTTTGAAGATTTATTTGGCATAGATAGGGATGTAAATTAAGCAGGTTGATCGATCCCAAATACTAATACGTGCGGTACCAAATCATTTTCGATCGTTGGATATATTAATATCCATCATATCCAACTAGATCCAATGATAAAAAACAATTTGATACCGTGACATACGGTATTTTTGTTGGACCTTAGCAAATCTCAAATTAAGCAGGTCGATCACAAGGTGCGGTCGTCGTCAGCAGGCGCCACGGCGGAAGCCGACGGAGCCGCCGCCGACGTCGTAGAGCACCTCGTGCGTCTGCTGCTGCACGTTCCCGATGAAGCCGAGCGCGAAGTCTCCCGGCGTCGGCACGAACGCGAGGCACCCCTCCACCATGACTCCCATCGCGTCCAGCCTCACCACCGCGCCGCCGTCGAACACCAGCGACACCGCCGGCACCGTCACGCTCGTGAACCGGACGAAGTCGTAGCAGGTGTCCAGCCCGGCCCTCCCTCCCGACACCCGCGGGTACGCCGCCATGGCGCTCCGGAACGCCAGCCGCAGCGCCCTGTA



gi|86500187|gb|CI142820.1|CI142820 CI142820 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa

ATCCAACGATCGGAAATGATT
|| ||||||||||||||||||
TAAGTTGCTAGCCTTTACTAA

EST sequence (targeted fragment marked with yellow):
GAGAGAAACTTTTTTGTCATTATACTCTCCACGTTATAATAAACGAATACGAAAACTACCAACAGTTTCTAGTATTAATAACTTATAAATCATACCTCCAGCATATGTAACGAATACGAAAACTACCAACAGTTTCTAGTATTAATAACTTATAAATCATACCTCCAGCATATATTTAATTCCAAGATACCAATGGAAACCTATATTATTTGAGATTTACTCCGGTTCAAAAAAAAATATATATTGAGATACCGGTATCTCATTATACCAAATCATTTCCGATCGTTGAATCTAACAATGCACATTATACGTAGCTAGATCCAACAATCAGAAATAATTTTATACCGTGAGGTGAGGTATCGATATCTCGAGATATTTTTTATTAACCGGAGCAAATCTCATATTATGTTATATTATGTTATGTGTCTTGGTCTACTTCAAGACCTGCGCGAAGAGCTCCTTGATAACGGAAGGGCAAGTGGTGGTGAGCAGACGGAAGTCATCGTCCAGCCTCGTCACCTGCCTCAGCTTCCTCTTGCACGAGAGGAAGTCCAGGCACGCCGCCTTGAGCACG



gi|88345932|gb|CI632405.1|CI632405 CI632405 Oryza sativa (japonica cultivar-group) germinating seeds Oryza sativa Japonica Group

ATCCAACGATCGGAAATGATT
||||||||||||||||..|||
TAGGTTGCTAGCCTTTGTTAA

EST sequence (targeted fragment marked with yellow):
GATGATGATTTGAGGTGTTCTTGCGTGTAGATAGGTCGATCGGGGGTCATTCTTTGGACCGATCGATATATGGACGTTAATTTGTTCGTCTTTGTGTGTTATTTGTATATAGGAGATGAGATTTACTCCGGTCCAACAAAAAGTAACTCGAGGTACCGATACCTCACGGTACCAAATTGTTTCCGATCGTTGGATCTAGCTGGGTGGGTTGGGCATCGTTAGATCCAACGATCGGAAATGATTTTGTACCGCGAGGTACCGATACCTCGAGATACTTTTTGTTGGACCGAAGAAAAACTCATATAGGAGATGGGTGCTCTTGTTCGTAGTTTGTTTGATTCTGTTATTTTTTTTCTCTTGTACATATAAAAGAGATTGGGATTTGTCCAAAAA



gi|88245701|gb|CI245550.1|CI245550 CI245550 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat

ATCCAACGATCGGAAATGATT
|||||||||||||||||||||
TAGGTTGCTAGCCTTTACTAA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTGGAAACAAATCCCAATCTCTTTTATATCTACAAGAGAAAAAAAATAACAGAATCAAACAAACTACGAACAAGAGCACCCATCTCCTATATGAGTTTTTCTTCGGTCCAACAAAAAGTATCTCGAGGTATCGGTACCTCGCGGTACAAAATCATTTCCGATCGTTGGATCTAACGATGCCCAACCCACCCAGCTAGATCCAACGATCGGAAACAATTTGGTACCGTGAGGTATCGGTACCTCGAGTTACTTTTTGTTGGACCGGAGTAAATCTCATCTCCTATATACAAATAACACACAAAGACGAACAAATTAACGTCCATATATCGATCGGTCCAAAGAATGACCCCCGATCGACCTATCTACACGCAAGAACACCTCAAATCATCATCAACGATATGATGTGGTATCAACGATCAGTAGCCGGCGATCTCCGAGCTCTGCTGGTCGCCGTGCTTCTTGCCACCGGACTTCTTCTGCTGGTACTTG



gi|88727292|gb|CI750947.1|CI750947 CI750947 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

ATCCAACGATCGGAAATGATT
||||||||||||.||||||||
TAGGTTGCTAGCTTTTACTAA

EST sequence (targeted fragment marked with yellow):
TCTTTGAATTTGGCTCCATAAAGGTCTGAGGCTCCAATGGCCTGGTTCATTGTTGAAGTCTCTTTTCTTGATCGTGTCCGCTATTACTGAATTATCAGTTAAAAAACTAGTGCCTGCAAAGTTGAAGAATTTGGCAATCTCCATAGCTAGTTGCAGTGCCACCAGTTCTGCCTGCAAAGAATATTGAGCTACCTCGCTTTTGGCTTTAATAAAAGAGATTTGCTGAAGTATGTCAAACGGTACTAAATCATTTTCGATCGTTGGATCTAGCTAGGCAGGGTATTAGACCAGAGCAAATCTCTTAATAAAAAGAGCATTGTGTGTCATCGGCATGTGGAAGAAAATACCAATCCCTATGAAAGTGTTCTCCCAAGCTGCATCTATATAACATCTATTGGCCTCCGAAA