| mature miRNA: ATCGAGTGCAGCGTTGATGAG species: Elaeis guineensis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|161970555|gb|EL691222.1|EL691222 OPR01256 Elaeis guineensis root Elaeis guineensis cDNA clone PLATE217-H3-T3.seq, mRNA sequen ATCGAGTGCAGCGTTGATGAG EST sequence (targeted fragment marked with yellow): ATTATGCTATCGAAAAGGCTGGTTACACCGGAAAGATCAAAATAGGAATGGATGTAGCAGCTTCAGAGTTCTACACAAAGGATGGGAGATATGATCTGAATTTTAAGAAGCAGCCAAATGATGGAGCCCATGTTCGCACAGCTCAAAGCCTTGGTGAACTGTATAAAGAGTTTGTCAGAGATTTCCCTATTGTGTCTATTGAGGATCCCTTTGACCAAGATGACTGGAGCTCTTGGTCATCACTGCAGTCGTCAGTCGACATCCAGCTAGTAGGGGACGATTTACTGGTTACCAATCCAAATAGGATTGCTGATGCAATTCAAAAGAAGGCCTGCAATGGTCTGCTATTAAAAGTTAATCAAATCGGCACTGTTACCGAATCCATTAAAGCTGCACTTGATTCAAAGGC | |||||||||
gi|56929255|gb|CN599915.1|CN599915 EG-A11_004_D03 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequenc ATCGAGTGCAGCGTTGATGAG EST sequence (targeted fragment marked with yellow): CATCATCGAGTGCAGCGTTGATGAGCTCCTATTACCGTATTTCGCTGGCTGTATCAAAAGTTCTGTCTCCTGCGCAGCGACTGTGAGGATTTCGCCAGCGCTGCATTCGATAATGTCTTTGATATATCGGCAGAATGAAGCAGCCAAAGAGCTTGTCCATCAAATTTGGAGGAGTCTCTAAACAAGCAAAGTGTGAGGAGAGATGAGTTCAATAGAAATCCCTGAGTGGGTGAGAAATGTGGTGTGCAACAAGGTTGAAGGCAGTAACCCCCGGTTCATAATGACCAAGTCCCTCACGAGTTCCGATCTCGATCATCAATGCCAGAACCGACTCCGTATACCCGCTGCATATGTGGAGGANNNNNTCGTGCCTATGCTCTCTGATCTCGA | |||||||||