| mature miRNA: ATCGATGAACCGCTGCCTCC species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|52380375|gb|CV228674.1|CV228674 WS01910.B21_O02 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS01910_O02 3', mRNA sequence ATCGATGAACCGCTGCCTCC EST sequence (targeted fragment marked with yellow): GCTAACATCTTCAATTGAAATTAAAATCCTTAAATCACTCAAAAAATACAGCTGAAAATAGAAAAAAAGAACACTCACAACATTACTGCAATCAAGAGTAGAAACTTTCTTCTTCTTTTTTAACAAAATATACAGCAATTTTTGTTTTCTTGTCTAAGCACAAGCACAGGGATTATCGAGAAGCATCGAATTCTCATCTTTACTTCTAAATGACAAATACCCAATTGTCAACCCCAAGACAACAGCCAAAAACACCCCTCCGTTAAACGACATGACGACTAACATCAACAGATACCCAATCCCTGAATTTATCCCAAAAAGCACAGCTCCTCCCACTCTCGCGGCAGACGACCTCGCTTTTCCTCCACCACCCATCGTTTGAAGCAGCGGCTCATCGATCGTGGCCGATGGTGATGGTTTCGCTTTCACAGATCCGGAGGAGATGAGTTTGAGTCGCATGCGGTGGTTCTCCAGGTACTGGTAGAAGATGGAAGCGAGGAGACAAGCGAGTAGAGAGAGAGAATAAC | |||||||||