miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: ATCTTTAGTCCCGCTTGGTGAGA
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|29623965|gb|CB628976.1|CB628976 OSIIEb04N19.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb04N19 3', mRNA sequence

ATCTTTAGTCCCGCTTGGTGAGA
||||||||||||| |||||| |
TAGAAATCAGGGCCAACCACAAT

EST sequence (targeted fragment marked with yellow):
AGATGCAGCAACTGGTACACGGGCGTCATTTACAGCAGATGCAGCAAATGGTACGCGAGCGTCAGCAACTGGAGGAACGCGAGCGTCAGCAACTGGAGGAACGCGATCGCTACGAGCGCTGGTGGATGCGGGAACCCTTTGCAGTCCCGGTTTCTAACCCCCTTTAGTCCCGGTTTTGAAACCGGGAGTACCAATCCGGGACTAAAGATCGCTATCTTTAGTCCCGGGTGAAATAACCGGGGCTAAAAATCGATCTTTAGTCCCGGTTGGTAACACCAACCGGGACTAAAGATCGAGCTGACCTTTTTTTTTTTGCATGGCCCTGTTGCTGCATATATATGTTTCAATACATATATATGCATACATATATATATATATATGTATATATATATATTATATTATATTATATGTATATACATGCATAATATATATGTATTTATACATATATATGTTATGCAAATGCATATGTACTGTATATAGATATATATATGACCAAAATATATTTACATTATAGAAAATGTGTACACATGCATATAGAAACATATGTAGTCATGTATTAATTACAATCCATTATATGTCCTAGCTAGCTACGATTTCGACGTAGTAGTACTCGCTGCTAGCTCAGAAGCTAAGGACCGGTGAATTGTGTTTCCGTCGTAGTAGAATTCACCCTTGGGATCAAGGATTTCTTCGTTGATGAATCCCATGAGTTGTTCTTGAACCGCCGCGATAAATTCCTTGTGTGTGGTCAGGTTATCCCTCATGCAAATAAACTATATGAATGTATGAAATTGATTAGTAATGAAGCAAGAAATTGCTACGTAATGAAATTTTGAATTTAAAAAAAAG



gi|29624641|gb|CB629652.1|CB629652 OSIIEb06B02.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb06B02 5', mRNA sequence

ATCTTTAGTCCCGCTTGGTGAGA
|| |||||||||| |||||.| |
TAAAAATCAGGGCCAACCATTGT

EST sequence (targeted fragment marked with yellow):
TGGAGGAAGAGGCGTAGAGATAAGGCTGCCCGTTTCCTCCTCCTCCTCGATCTCGTAGATGGCAGATGCCTCGTACTCTCCGCCACGATCTTTTGTTCTGGTTGGTAATACCAACCGGGACTAAAGATAGTAGGCATCTTTTTTCCCGGTTGGTGTTACCAACCGGGACTAAAAATAGCCAACGGGGACTAAAGATTAAAAAGCAGCTCTAAACTTTTGAACTGGGGCTAAAGATAATCTTTAATCCCGGTTTTTATTGCAACCGGGACTATCGTGGATTTTGGCCGACTGAGCAAATATGGTTTCTCCACCAGTGTAAATTCGGAACGTAACTTTTAATTTAGAAGTGAAGATATTATTAGCTTTACAGCACGGCATCAGCGAAATGACAGCAATATTAGTTTTATCAAGGCGAAATCGTACAAGTTATTGGGGTATCTATTTGTAAACTGGATTATCTTTTATATATTATCTACCAGTCACTTTTTAACTTCTAAATAACAATATTTACGTGCCAAACTTTTTTTTCGGATGAGACACATATACTGTGTTATAACTTTTTATTTTTTTAAAAAAAATACACTTCAGTGTAGATCTTACGAACATTAACAACTTATAATATATTTAGATTAATCCAGTAGAAGTATGGTAATGAAAATTAAAAGTCATACTAAATGTGTAGTTTTTCGGATTGTACAGTTCAGTTGAGTCGGTTAAGAAAAAAATTGAAGCAATTAATTGATAGATATATAGAGTGATTGCCATGTGCTTTGCCATCTCAGTGCATGCTGATTCATACGCCAATATCTAACTGATCGTCGGCATGCTGGACCAAT



gi|86897050|gb|CI317464.1|CI317464 CI317464 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone

ATCTTTAGTCCCGCTTGGTGAGA
||||||||||||| |||||. |
TAGAAATCAGGGCCAACCATCGT

EST sequence (targeted fragment marked with yellow):
ATATATTTTGTGATTCACTAATATGTATAATTTTGTGATGGATTGTATGGGTCTGAGATGTATAGTCTGTGATGTATTTGATTTGTGTGTAATTTTTTTAGGATTTGTGATGTATTTGATTTGTGTATGTTAGTAACTTTAAGATTTGTGATGTGGATTGGGATGTTACTTTGATTTGGGGATTTGGGGTTTGATTTGGGATGTGAATGCCACCCGATTCGGGAGAAAATAAAAAAGAAACAAGAAAAAAGAAAAGGGACCATCTAGACTGCCGCTATCCCTCTTTAGTCCTGGTTGGTGTAAAGAACTTTCTCTTTAATCCCGGTTTTTGCTACCAACCGGGACTAAAGATTTAGTCCGGTTATTTCAACCGGGACTAAAGATGGGCATCTTTGTCCCGGATTCCTACTCCTGGTTGGAAATCCAGGACTAAGGGGGTTACAACTGGGAGTAAACAAGGTTTCTCCACAGTGACTGTGCTCTCACACAGTGCATTCTACAGCTGAAATAGTCTCA



gi|89198071|gb|CI117549.1|CI117549 CI117549 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo

ATCTTTAGTCCCGCTTGGTGAGA
||||||||||||| ||.|..| |
TAGAAATCAGGGCCAATCGTTGT

EST sequence (targeted fragment marked with yellow):
GAGATATGTCTCCCACNTTGATTGGGAGAAAATAAAAAAGAAAAAGGGGATCATCTCACTACCGCAACCCTCTCTTTAGTCCCGTTGGCCCCTCTCTTTAGTCCCGATTGGTGTTGCTAACCGGGACTAAAGATCTATTTTTAGTTCCGGGTATTTGAACCGGGAATAAAGATAGCGATTTTTAGTCCCGGATTGGTAGTCCTGGTTAACCGGGACTACAGGGGGTTGCGAACCGTGACTAAAAATATTTCTCCACCAGTGGTTGTAACAATATTGCAAAATGTACTGTACTTATTACATGGTCATCATCGTGGGCAACACCAGTCCAGAGCCTCTGAACTTGCTCTCGGTAATCTCGTCGATCCTTGTGGCCATCTCCGGCGACAGGTAGTTCGGCCAGCCCCCGACGACGCCTCGCCGGAAGAACTCGGCGTTCCGCATCGGCTCCTCCATCAGCTCAATCGTCCCTGACCTGTTCACCTCCGCGCCCGCTAGGCTCTCGAAGCTGCACGCCTTC



gi|29668854|gb|CB665129.1|CB665129 OSJNEd11E20.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd11E20 3', mRNA sequence

ATCTTTAGTCCCGCTTGGTGAGA
||||||||||||| |||||. |
TAGAAATCAGGGCTAACCATAAT

EST sequence (targeted fragment marked with yellow):
TAAGGTAGGAGGAATGAATGTTTTAGGCCATTCGTGCATCCTTTGGGATATCAATATATATGATACCACGGAATACTCCTTGAAGTACTACATCGGTAATTTCACGTGCTTAGGAAACTTTTTTGTAGGAGCATTAGAAATACCAATACCTACAAAGTTGTTTATATTAAAGGGTTAATTGATATTCATATATCAGTTACTATTACTAAAAAAGAACTTACTAATGTACAATATATGTAAATAAGTTACTCCCAATTTGATGCAAGACCTAGATTCATCAAACATATCACCATCCCTACTAAATGCATTATGTAACATACACATGTCGTTTACTTTGACGAGTTTTTTTTTCCACATACCTATTAATTTTCACAGACCTCGCCGACGGGGCCGNTGCCCCCTCCCCCACCGCAGCTGGCGCCGCGTCTCCCCCTCCTGGTCACGCCGTCGCCGACAGAGAGGGGAGGGGAGGGGGAGGAGGAGGAGGAAGGGTAGGGGAGGACGCATCTGGAGGGAGAGGAGGAGACGCAAATGACTTAAAAAGGCGTGGAGATATCGAGGAGATAAGGGCGGGGAGGCGCACACGTGCGACCCGGCGTGTTTTTTCGGATTTGTAGTCCCAGTTGGTGCTACCAATCGGGACTAAAGTGATGATATTTAATTCCGGTTTATAATACCAATCGGGACTAAAGATCCTTGGGGCCTGACACGGCCTATCAACTTTTTGAAGCGGGCCAAAAAAAAAAAAAAAGAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAGCTTTTGT



gi|88694693|gb|CI738731.1|CI738731 CI738731 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

ATCTTTAGTCCCGCTTGGTGAGA
||||||||||||| |||||| |
TAGAAATCAGGGCCAACCACAAT

EST sequence (targeted fragment marked with yellow):
GTTAAAAAGGGTAACGGACATATTTGATCTTTACTCGGGCATATTTGATCTTTAGTCCCGGTTGGTAACACCAACCGGGACTAAAGATCATCTTTAGCCCCGGTTTTTATTGCAACCAGGACTATTGTGGAATTCGGCCGACCGACGAAAGATGGTTTCTCCACCAGTGGTTATGATTCTTCTGTTTGGAAAGAAAATATAAAAAAGATTATACGAAGGTTCAAAAAAAACTCGTTATTAATCCGATGCTAGATAAACCTTAGGTCAGTGTCACGTATACGAAGAGGGTGAAATGCGATGAGCCTCATCAATTTTATGCCTACAAGAATAATGCATGT



gi|29664347|gb|CB660622.1|CB660622 OSJNEd02J11.f OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd02J11 5', mRNA sequence

ATCTTTAGTCCCGCTTGGTGAGA
||||||||||||| |||.|| |
TAGAAATCAGGGCCAACTACAAT

EST sequence (targeted fragment marked with yellow):
CCTTTAAGACAGATCAAATCTCTCCCCCTCTTCCCTTTCCCCTTCCTCTCCTCTCCTACAGTCTATCCTCTCTTCCTCATCCCCTCTCCTCCACCTCCTGCCCTTCCTCCTCTCCTCCCCCTCCTCCCCTTCCCATCCGGCGGGCCGGCGGCCGTGGCGAGCAGTGGCAGCGGCTTTGTTTGTCTTTTTTTATATAATCTGTGATTCACTAAGATGTTTAAATTTGTGATTCAATGCATGGATCTGAGATGTATAATCTGTAATGTATTTGATTTGTGTGTAATTTTTTAGGATTTGTGATGTATTTGATTTTTGTGTATAAGTAACTTTAAGATTTATGATGTAGATTTGGGATGTTACATTGATTTGGGGATTTAGGGTTTGATTTGATTTGGGGATTTGGGGTATGATTTAGGGATATGCATGCCACTTGATTCGGGAGAAAATAAAAAAAGAAAAAAAAGAAAAGGGGATCATCTGGTACTGCCGCTATTCTTTCTTTACTCTCGGTTGATAACATCAACCGGGACTAAAGATCCCTCTCTTTAGTCCGGATGGTCCATCTTTAGTCTTGGATTCCTATTCCGGTTGGAAAACCGAGACTAAAAGGGTTACTAACCGGGAGTAAAAATAGTTTCCACCTATATATAAAGTAAAATATATGACTGATTCAATATGTCATCTGAGGTCCAACGTGTAACGATCGATCCAATCGCCATCGTAGCACCCACTGTGGCGAGAAATTTGTATTTAGACCCCCCGTGCT



gi|29664345|gb|CB660620.1|CB660620 OSJNEd02J10.f OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd02J10 5', mRNA sequence

ATCTTTAGTCCCGCTTGGTGAGA
||||||||||||| |||.|| |
TAGAAATCAGGGCCAACTACAAT

EST sequence (targeted fragment marked with yellow):
CTCACACAGATCAAATCTCTCCCCCTCTTCCCTTTCCTCCTCCTCTCCTCTCCTACAGTCTATCCTCTCTTCCTCATCCCCTCTCCTCCACCTCCTGCCCTTCCTCCTCTCCTCCCCCTCCTCCCCTTCCCATCCGGCGGGCCGGCGGCCGTGGCGAGCAGTGGCAGCGGCTTTGTTTGTCTTTTTTTATATAATCTGTGATTCACTAAGATGTTTAAATTTGTGATTCAATGCATGGATCTGAGATGTATAATCTGTAATGTATTTGATTTGTGTGTAATTTTTTAGGATTTGTGATGTATTTGATTTTTGTGTATAAGTAACTTTAAGATTTATGATGTAGATTTGGGATGTTACATTGATTTGGGGATTTAGGGTTTGATTTGATTTGGGGATTTGGGGTATGATTTAGGGATATGCATGCCACTTGATTCGGGAGAAAATAAAAAAAGAAAAAAAAGAAAAGGGGATCATCTGGTACTGCCGCTATTCTTTCTTTACTCTCGGTTGATAACATCAACCGGGACTAAAGATCCCTCTCTTTAGTCCGGTTGGTCCATCTTTAGTCTTGGATTCCTATTCCGGTTGGAAAACCGAGACTAAAAGGGTTACTAACCGGGAGTAAAAATAGTTTCCACCTATATATAAAGTAAAATATATGACTGATTCAATATGTCATCTGAGGTCCAACGTGTAACGATCGATCGAATCGCCATCGTAGCACCCACTGTGGCGAGAAATTTGTATTTAGACCCCTCGTGCTATATAATATGCCTTCAAGTCAACTTCCAAACACTCCCAGACCTTTTGAGAAAAAAAATTCAAAAATATACTTTTTTTTTCATTGGG



gi|29624641|gb|CB629652.1|CB629652 OSIIEb06B02.f OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb06B02 5', mRNA sequence

ATCTTTAGTCCCGCTTGGTGAGA
||||||||||||| |||||. |
TAGAAATCAGGGCCAACCATAAT

EST sequence (targeted fragment marked with yellow):
TGGAGGAAGAGGCGTAGAGATAAGGCTGCCCGTTTCCTCCTCCTCCTCGATCTCGTAGATGGCAGATGCCTCGTACTCTCCGCCACGATCTTTTGTTCTGGTTGGTAATACCAACCGGGACTAAAGATAGTAGGCATCTTTTTTCCCGGTTGGTGTTACCAACCGGGACTAAAAATAGCCAACGGGGACTAAAGATTAAAAAGCAGCTCTAAACTTTTGAACTGGGGCTAAAGATAATCTTTAATCCCGGTTTTTATTGCAACCGGGACTATCGTGGATTTTGGCCGACTGAGCAAATATGGTTTCTCCACCAGTGTAAATTCGGAACGTAACTTTTAATTTAGAAGTGAAGATATTATTAGCTTTACAGCACGGCATCAGCGAAATGACAGCAATATTAGTTTTATCAAGGCGAAATCGTACAAGTTATTGGGGTATCTATTTGTAAACTGGATTATCTTTTATATATTATCTACCAGTCACTTTTTAACTTCTAAATAACAATATTTACGTGCCAAACTTTTTTTTCGGATGAGACACATATACTGTGTTATAACTTTTTATTTTTTTAAAAAAAATACACTTCAGTGTAGATCTTACGAACATTAACAACTTATAATATATTTAGATTAATCCAGTAGAAGTATGGTAATGAAAATTAAAAGTCATACTAAATGTGTAGTTTTTCGGATTGTACAGTTCAGTTGAGTCGGTTAAGAAAAAAATTGAAGCAATTAATTGATAGATATATAGAGTGATTGCCATGTGCTTTGCCATCTCAGTGCATGCTGATTCATACGCCAATATCTAACTGATCGTCGGCATGCTGGACCAAT



gi|88724251|gb|CI747510.1|CI747510 CI747510 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

ATCTTTAGTCCCGCTTGGTGAGA
||||||||||||| |||||| |
TAGAAATCAGGGCCAACCACGGT

EST sequence (targeted fragment marked with yellow):
TAAATTATTTTATACCAAATGCTTACAAGAGACAGCAAAAACAGTTTAAATCTATATTTCTAATCACTGGTGGAGAAACCAATCTTTGGTCGGTCGGCCGAAATCCACAATAGTCCCGATTCCACTAAAAACCGGGACTAAAGATGATCTTTAGTCCTGGTTGGTGGCTACAGTGGGCATATTTGATCTTTAGTCCCGGTTGGCACCAACCGGGACTAAAGATGATCTTTAGTCTCGGTTCTAAACCTGTTAGTCCTTGTCAGGCCCCCAACTTTACTCCCGGTTGGTGTTATAAACCTGGACTAAAGATCTAGAAGATTTTTAATCCCAGTTGGTATTACCAACCGGGACTAAAATTCAANGCTTA



gi|89186254|gb|CI262086.1|CI262086 CI262086 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat

ATCTTTAGTCCCGCTTGGTGAGA
|||| |||||| | .||||||||
TAGATATCAGGACAGACCACTCT

EST sequence (targeted fragment marked with yellow):
AAACTGAATCAGACATCTCACCAGACAGGACTATAGATTAAATTATGCAAGTACTTGAAACTCCATTCCAGAGGACCAAATGGTACCAAGTTGCAATAGTAACATTGAGGTCTCAACAAGATCACTACTAAAGCATGACAAAAATAGGTCGAATCACATCGTCTCGTAAGGTACATAAGCAGCATTTTGGAACAAATGATCACTTCAGTAGCACGAGATGGTAATGTCCTCAAATATCAAGCCTTTTAAGCCGAAGGGATCTCGACCTCGCCATCGGAGATCTCCTGCTGCAGATCCTTGGGGTCCTTGCCGTCGACGGTGCACCCAACGCTGACGCAGGTCCCAAGGATCTCCTTGACGGTCCCGGCCATCTCCTTGGCCATGGACCTGTTCCTCATGATCCTGGCGATCTCGATGACGTCGTCGAGGCTGATGTTACCACTGTGCTTG



gi|29629679|gb|CB634688.1|CB634688 OSIIEb14F22.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb14F22 3', mRNA sequence

ATCTTTAGTCCCGCTTGGTGAGA
||||||||||||| |||||| |
TAGAAATCAGGGCCAACCACAAT

EST sequence (targeted fragment marked with yellow):
ACAAAGTTTGATAATCCTATAGTCAGATATTACCCAAGAAACCTAATGAATTATGCTCACTTGGCTGGTTGTAAACAAATTATGTTCAATAGTACGCTGGTTGTAAACAAATAATTCTGGTCCCTAGGAGAAACAAAAGAATATTAATTTGCAGAATAAACCTATAATAACGTTGAAATATAATCGCTGGAGTAAGAGTATCAATTTGCAGAAGGTGCTGCTACATATGCATCTCTTGGTACGATTAATTCGGCGATTTCTCATAGGTAAGTATTGATTAGAGAAGCGGATAAAAAATTTCTCAATATGAATTAATGGTACTTCGATCACTATTAATTACTCCAGCCTCAAGTTACTAATTAAGGGGGGAGATCTACGCACAGCAGCCGATGTGTACTATTCATGTGATCATTAACACAGGGGGAGAAAGGGGTTTTACTCCCGGTTCGTAACCCCCTGTAGTCCCGGTTTCAACCAGGACTAGACTAAAGATCACTATCTTTAGTCCCTGATCTTTAGTCCCGGGTGAAAAAACCAGAAGTAAAAATCCATAAGATAGAGCCTTTTTAGTCCCGGTTGGTAACACCAACCGGGACTAAAGATAGAGCTAGCCTAGCTAGATCGGTTGCTTTATTTTCTTTTCTTCATTGTGTTTTTAATAATTTGATTTCGCTCCATCCCTATCCCAAAATCCCAAATAAATTATCCCCAAATCCTCAAATCCCCAAATCGGCCATATTCAAATAGATCACAAAATCTTAAAACAAAATTACATCACAACTTCTACAAAATTCATCACAAATACATCACATATTCACGCACATCACACACAAATCAAATACACATATCCAAATCACAAATTCT



gi|88724795|gb|CI748054.1|CI748054 CI748054 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

ATCTTTAGTCCCGCTTGGTGAGA
||||||||||||| |||||| |
TAGAAATCAGGGCCAACCACAAT

EST sequence (targeted fragment marked with yellow):
GTTAAAAAGGGTAACGGACATATTTGATCTTTACTCGGGCATATTTGATCTTTAGTCCCGGTTGGTAACACCAACCGGGACTAAAGATCATCTTCAGCCCCGGTTTTCATTGCAACCAGGACTATTGTGGAATTCGGCCGACCGACCAAAGATGGTCTCTCCACCAGTGGTTATGATTCTCCTGTCTGGAAAGAAAATATAAAAAAGATTATACGAAGGTTCAAAAAAAACTCGTTATTAATCCGATGCTAGATAAACCTTAGGTCAGTGTCCCGTATACGAAGAGGGTGAAATGCGATGAGCCTCATCAATTTTATGCCTACAAGAATAATGCATGTGTATGTGCA



gi|88694009|gb|CI738047.1|CI738047 CI738047 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

ATCTTTAGTCCCGCTTGGTGAGA
||||||||||||| |||||.|
TAGAAATCAGGGCCAACCATTGA

EST sequence (targeted fragment marked with yellow):
GGTGGATTTGGGATGTTAATTTGATTTGGGATTTGGGGATATGCATGCCACTTAATTCGGGAGAAAATAAAAAAGAAAAAAAAGAAAGATGACCATCTGTACTGCTGTTATTCCCTCTTTAGTCTCGGTTGGTAGACCTTATCTTTAGTTCCGGTTGGAGTTACCAACCGGGACTAAAGATCGATCTTTTGTCCCGGTTATTTCACCCGGGACTAAAGATAGCGATCTTTAGTCCCGGATTCGTAGTCCCGGTTGTCCGGGGTTACGAACCGGGACTAAAAAGCATTTCTCCACCAGTGATGGAAAAGTTAAAGTTCGGAGAACTGGGCCAAGCAGCATATGGAGGCGTCGTC



gi|66929560|gb|CX116408.1|CX116408 EI104D17 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl

ATCTTTAGTCCCGCTTGGTGAGA
||||||||||||| |||||.| |
TAGAAATCAGGGC-AACCATTGT

EST sequence (targeted fragment marked with yellow):
AAACAACTGTCTCAAAATCAGTTAATTAGTAGCTTAGATAGCAAAGATCATCGGAGGATCGGCGATGGCGGCGGCGCTCAGGACCACCGGCGGCCGGCGGCTGGCGGCGGTGCTCGTCATGATGCTGTTCGTCTTGGCGGCAGCGCTGCTGGAGGCGCCAGCGATGGCCTCCGCCGCGAGGGTGTTGCTTCAAAGTGGACAGCTTCCGACTCCGTATCCGACCTGCAATCCAGGCCAATATCCATGCCCATCGCGTACTACTGTGCCATGATTCACTGGTGGAGAAATCGTTTGTAGTCCCGGTTCGTAATCCCCCTTTAGTCCCGGTTGTCTAATCGGGACTACGAATCCGAGACTAAAAATAGCGATTTTTAGTCCCGTGTGAAATAACCGGGACTAAAGATCGATTTTTAGTCCCGGTTGGTAACACGAACCGGGACTAAAGATCGGTCAGCCACGTGGCTGGCTGATCCATCTTTAGTCTCGGTTGGTGTTACCAACGGGACTAAAGATCTATGTACCATTTTTTTTTATTTGCATTGCCATGTTTGCTGCATGGTTGATTATACACACCATATATATATATATATATATATATATATATATATATATATATATATATATATACATACATATATACATATATACCTATATATATATACCTATATATATGCGCATGTTATATGTCACACAACAATTTACCCGCTTTTCATGTTAAAGGCTCAACTTAATGACACATTTGTTGCCAAATATTAAACCAAGAGAAGAGCCCAATAAAAGAATTATAACGCACATAACAAACGAGACCACATGGAGGCGAAAAAGAACTAAGAGACTG



gi|86498997|gb|CI141630.1|CI141630 CI141630 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa

ATCTTTAGTCCCGCTTGGTGAGA
||||||||||| | ||||||| |
TAGAAATCAGGACCAACCACTGT

EST sequence (targeted fragment marked with yellow):
GTTGGTGTCACCAACCAGGACTAAAGATGGATCTTTAGTCCCGGTTATTTCATCCAGGACTAAAGATAGCGATCTTTAGTCCCGGATTGCTACTCCCGGTTGGAAAACCGGGACTAAAGGGGTTACCAACCGAGAGGAAATATGGTTTCTCTACCAGTAATACAATGTTACCTATCATTTGCATGCGACTTAAATAGTTATAAAAAAATTAAAAAACTTTAGTAGCATCGATTGTGATGATATAAGTCTATACGCAAATATGCATGACTAAATTTGATCTACAATTAGAGAAAAAAATAATAAAATTAAATAGTGAAAAGTACCCTTACAACGCAGATAAAATTTGTTATTTTGGTTACTTCATATGTTGATCGAATTTGGACTTGCATGTTTGTATAGTGTCTTATATCTTTATAATCTATCTTATCAAATTTTATAAAATTTTTATATAACTGTTTAAATTACATGCCTACACCTATGTGTAAAATATACTTACCCGTAATAAGGTTTCGCTCTATTTTCAGTTACTTGATCAAGTTCGTCCATTTTTTTGCTTTAAAAGAACCAGCACAACAGTACATGCTAATTAAACACCTTCATTAGTACGTACAGCGC