mature miRNA: ATGACAGAAGAGAGAGAGCAA species: Cajanus cajan database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|284463297|gb|GW357325.1|GW357325 CCSCRAFL09e02R Pigeonpea Scarabaeoides flood stressed cDNA Library Cajanus cajan cDNA, mRNA ATGACAGAAGAGAGAGAGCAA EST sequence (targeted fragment marked with yellow): ATCCAACGCGTTGGGAGCTCTCCCATATGGTCGACCTGCAGGCGGCCGCGAATTCACTAGTGATTAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTGCCAACTTCATTTTTATTTCTAACAAAATAATTGCATGCTACAAATACAAACATAAGAGATTGTACATAATACTACCAACACACAAGTTCCTACATTATTATCACCTAGGAGAGACACTTATTCACTGCCCTACAAACACAGAACAACACACCAACTTAACATGGGAACAAACGTAGAAAGCAGGCCCTTCAAGATTACACATGATCTTCATCAAGAAGCCTTTGATCAAAGTGCCAAACACCATGACCCTTTCCAACTAATCTCAGTTGAGCCACATACTCTGCAATCTTTTTAATCGATTTAACCTGCTCATACAAAAATTCGCTCTCTATGAAATCTGCCAGTTGAGGATCATTGTTACGGCTTGCCACACTATGAACATGAAGAAGTTTCTCATTTGTCAACTTCTCCAAAGACAAAGCTAATTCCATGGCATACAAGGCATCTCCTTTCTCCGAATGCTCAAATTCTGAGGGAGGACTTGTAATAGGGTGCAGCACCACTCGTCCTCCACGAATGTTCTGATACTTCATAAACTTTTCAGCGTGCTCTCTTTCTTCTTTCACTTGATTCCTTGAAGAATTTGGCGAGCCCTTGAGAGCTATGTTGTCTCTGTCGAAATAGGCAACAGGGCATGCGTCCCATACGAAACTTGTATCCACTTGGATCTGTCATGCTTGCCCTTCGACTCATTGAATATCTGAGAACAGGAACATTGACTATGGACGGCAGGAACTCTTACTCTCGAAGGGTCATTACCCAAAAAGTGGAGCGGACAACGAGTCAAACCCAAAATGTCCACCTGGGAACGGAAAAAAAACTTAGGACCGAACTGGAGT | |||||||||
gi|113075839|gb|EE604924.1|EE604924 CCUPAS120LF04h12F Pigeon pea Leaf cDNA Library Cajanus cajan cDNA clone CCUPAS120LF, mRNA se ATGACAGAAGAGAGAGAGCAA EST sequence (targeted fragment marked with yellow): TAGCCGACAGTACATTGGCAGTGAATCGAGCTCGGCACCATGATAGGGAAAGAATCAACTCAAGAAAATGCACCTTACAAACATTTCCAGATAAGATGAGATATGCTTTCATCTCAACTCGCTCTCTCTCTTCTGTCATCCTGGGGATGTATTTGTCAAACTATTCCTATGTCACATTCAAATGATCAAGATTGCATTTAGATAAATAACTTTTAACATGTTAAACTAAAAAAAACGGCTCACAAATC |