| mature miRNA: ATGCACTGCCTCTTCCCTGGC species: Arachis hypogaea database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|225595833|gb|GO323218.1|GO323218 VBL6_10_O20_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga ATGCACTGCCTCTTCCCTGGC EST sequence (targeted fragment marked with yellow): AACCTTACAAAAACATACAAAGAATCTTTCACCTTCAGTGTGCTACTTATATTGTTAATTATAGCCAAGATCTGCATCACTTTGGAGAGTACATACAAAAATGTCTAAGGGAAGAGGCAGCGCATCTTTACTTATGGTTATGGCCACCTTGATCCCTCTTATGTGTCTGCTGTTTCTAGTGAAACCTTCAAATGCAGCCACTTACACTGTTGGAGGACCTGGTGGATGGTCCTTCAACACAAATTCTTGGCCCAATGGAAAAACCTTTAGAGCTGGTGACGTGCTAGTTTTCAACTATGATTCAAGCACACACAACGTGGTTGCTGTGGATAGAATTGGATACAGCAGTTGCAGGACCCCAAGAGGTGCAAGAGTGTTCGGATCAGGGAAGGACCAAATCAAGATCGCAAGAGGTGCAAATTACTTCATATGTAACGTCCCTGGTCACTGTGAATCTGGCATGAAAATTGCCATCAATGCAGCTTGAATGGGATGGCCACTAGTAGCATGACTACAAGTGATGTTAATTAATTAATGTATGCTTATTAGCGTCATCATTGCATGTTGATAATAAATTAAGAGATGCCAAAATCCGATCAGAATTTATTATTTTTGACGTGTGAATTAGAAGTATGCTATTATATTATACTAAAAAAATTAGTTATGAAAAAAATTTATATGCAGTTATTTTTATATGAAATTAATGTTTAAAAATTATTATATAATTGCAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|300517584|gb|HO115836.1|HO115836 P2032 Peanut (Luhua14) seeds full length cDNA Library Arachis hypogaea cDNA 5', mRNA sequenc ATGCACTGCCTCTTCCCTGGC EST sequence (targeted fragment marked with yellow): ACCAAACCACACACAAAACCTTCCACCTTCAATCTGCTACTTTTTTTGTTAATAATAGCCAAAATCTGCCTCACTTTGGAAAGTACATACAAAAATGTCTAAGGGAAAAGGCAGTGCATCTTTACTTTTGGTTATGGCCACCTGGCTCCCTCTAATGTGTCTGCTGTTTTTAGTGAAACCTTCAAATGCAGCCACTTACACTGTTGGAGGACCTGGTGGATGGTCCTTCAACACAAATTCTTGGCCCAAAGGAAAAACCTTTAAAGCTGGGGACGTGCTAGTTTTCAACTATGATTCACGCACCCACAACTGGGTTGCTGTGGATAAAATTGGATACAGCAGTTGCAGGACCCCCAAAGGTGCTAAAGTGTTCAGATCAGGGAAGGACCAATTCAAAATCGCAAAAGGTGCAATTTACTTCATATGTAACGACCCTGGTCACTGTGAATCGGATTCGAAAATTGCCTTCTATGCATTTGGATTGGATTGGCCACAAATGATTGTTTCCAAGTGATGTTAATTAATTATTGTAGGCTTATTAGGGTCATCATTGCATGTTGATTATAAATTCAAAGATGCCAAAATCCTATCAAAATTTATTATTTTTGACCAATAATTAGCTCATATAAAAGTGTGAACT | |||||||||
gi|110815548|gb|EE126890.1|EE126890 B94 Peanut (Luhua14) seeds full length cDNA Library Arachis hypogaea cDNA 5' similar to basi ATGCACTGCCTCTTCCCTGGC EST sequence (targeted fragment marked with yellow): ACAAAAACACACACAGAATCTTTCACCTTCAATCTGCTACTTATATTGTTAATTATAGCCAAGATCTGCATCACTTTGGAGAGTACATACAAAAATGTCTAAGGGAAGAGGCAGTGCATCTTTACTTATGGTTATGGCCACCTTGATCTCTCTTATGTGTCTGCTGTTTCTAGTGAAACCTTCAAATGCAGCCACTTACACTGTTGGAGGACCTGGTGGATGGTCCTTCAACACAAATTCTTGGCCCAAAGGAAAAACCTTTAAAGCTGGTGACGTGCTAGTTTTCAACTATGATTCAAGCACACACAACGTGGTTGCTGTGGATAGAAGTGGATACAGCAGTTGCAGGACCCC | |||||||||
gi|116489043|gb|EG530006.1|EG530006 B94T7 Peanut (Luhua14) seeds full length cDNA Library Arachis hypogaea cDNA 3', mRNA sequenc ATGCACTGCCTCTTCCCTGGC EST sequence (targeted fragment marked with yellow): TAAGGGAAGAGGCAGTGCATCTTTACTTATGGTTATGGCCACCTTGATCTCTCTTATGTGTCTGCTGTTTCTAGTGAAACCTTCAAATGCAGCCACTTACACTGTTGGAGGACCTGGTGGATGGTCCTTCAACACAAATTCTTGGCCCAAAGGAAAAACCTTTAAAGCTGGTGACGTGCTAGTTTTCAACTATGATTCAAGCACACACAACGTGGTTGCTGTGGATAGAAGTGGATACAGCAGTTGCAGGACCCCAAGAGGTGCTAAAGTGTTCAGATCAGGGAAGGACCAAATCAAGATCGCAAGAGGTGCAAATTACTTCATATGTAACGTCCCTGGTCACTGTGAATCTGGCATGAAAATTGCCGTCAATGCAGCTTGAATGGGATGGCCACTAGTAGCATGAGTACAAGTGATGTTAATTAATTAATGTATGCTTATTAGGGTCATCATTGCATGTTGATAATAAATTCAGAGATGCCAAAATCCGATCAGAATTTATTATTTTTGACCAATAATTAGCTCATATAAAAGTGTGAACTAGAAGTTATATGTAGTTATTTTTATGTGAAATTAATAATTAAAAAGTTTTTTACCAT | |||||||||
gi|149650155|gb|ES761138.1|ES761138 ISBL_5_D07_E003.g1 USDA-Tifton Peanut Library ISBL Arachis hypogaea cDNA clone ISBL005_D07_0 ATGCACTGCCTCTTCCCTGGC EST sequence (targeted fragment marked with yellow): ATCAAGTGGGTCCTCACCCAAGTCCCCAAGTGGGTCCCCTTCACCTCCCTCAACTACACCAGCTACTCCTTCTTCACCTGCACCCAAGGATAACGCTGCAGTTGGTGTTTCTAGTGGCGTTACCCAATTCATTGGGGCTTTGCTTGCTTCTGCCCTTGTTTTGGGATTTATGTTCTAGGGAAGAGGCAGTGCTACTTGGATTATTTTCTTTATGTATTTGAGTTTTCATTTTTAAGTATATGTAATCATCACTTCTTCTTGGTTTGTTGGATTATTGTGTGGATTTTTATTAAATTTGATCTTAGATGTATATTTATTTGATCTANAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|225611238|gb|GO337885.1|GO337885 VBL6_55_H01_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga ATGCACTGCCTCTTCCCTGGC EST sequence (targeted fragment marked with yellow): CTCGCTGTCATTGTTCTCTGCCGCGCAATCAAGCAAAAAAGCACGTTAGGGTTTCCCAATCTCGCAGTTGCAGAGACAGCTTCGCAGCGACAATGGCCACTCTCGTCCCTACCTCCGAGGAAGATGCCGCTCTCTCTGTCGTCCGTTTCGCCTCCGAGCTCGCCTGGGCCGACGCCGGTCCCGAGGTTGCTGAGCCACAAGTTAGTAGACTATGCATGGAGGCTGAAGAGTTCATTGCTATGGGGAAGTGGTTGGAGCTAGCATCATTGATGATTACGTCTGCTGAGTTGATCTTCTCAAAGGTTACTGAAAAAGATGTGGAGTCCATCTTCACTGTTATCTGCAATCTTGTTACGAAGACTGAGAATCCAGATGAAGTAATGGAGATCATCAAAGTTATATCAGCAAAATTAATTCAACAACCTAATGAAAAGCCTGCGGTGCGCTTGAAGATTTTGATCAATCTGTACAATCTTGTGGAGACTCCATACTGCCGCTTTTACATCTACATGAAAGCGTTGAATTTAGCAGCTGAAGGGAAAGTCACTGAATACATTATCCCTTCATTAAAAAATATTGACAATTTTTTGAAAGACTGGAAAATTGGGATATCAGAACAGAGAGAACTCTTTCTTACTATCTCCAAGATTTTGAAAGAAAATAAAAGCATGGCTAAAGACTCTTTTAAGTTCTTGACAAATTATTTGGCAACTTTTAATGGAGAAGATGCACATGAATTGAGTGAAGCAAAGGAGGAGGCTGTGCATGCAATCATTGATTTTGTGAAATCACCTGATATATTCCA | |||||||||
gi|225601019|gb|GO331794.1|GO331794 VBL6_37_B01_E001.g1 Normalized cDNA library from developing embryos of peanut Arachis hypoga ATGCACTGCCTCTTCCCTGGC EST sequence (targeted fragment marked with yellow): CATTGTTCTCTGCCGCGCAATCAAGCAAAGAAGCACGTTAGGGTTTCCCAATCTCGCAGTTGCAGAGACAGCTTCGCAGCGACAATGGCCACTCTCGTCCCTACCTCCGAGGAAGATGCCGCTCTCTCCGTCGTCCGTTTCGCGTCCGAGCTCGCCTGGGCCGACGCCGGTCCCGAGGTTGCTGAGCCACAAGTTAATAGACTATGCATGGAGGCTGAAGAGTTCATTGCTATGGGGAAGTGGTTGGAACTAGCATCATTGATGATTACGTCTGCTGAGTTGATCTTCTCAAAGGTTACTGAAAAAGATGTGGAGTCCATCTTCACTGTTATCTGCAATCTTGTTACGAAGACTGAGAATCCAGATGAAGTAATGGAGATCATCAAAGTTATATCAGCAAAATTAATTCAACAACCTAATGAAAAGCCTGCGGTGCGCTTGAAGATTTTGATCAATCTGTACAATCTTGTGGAGACTCCATACTGCCGCTTTTACATCTACATGAAAGCGTTGAATTTAGCAGCTGAAGGGAAAGTCACTGAATACATTATCCCTTCATTAAAAAATATTGACAATTTTTTGAAAGACTGGAAAATTGGGATATCAGAACAGAGAGAGCTCTTTCTTACTATCTCTAAGATTTTGAAAGAAAATAAAAGCATGGCTAAAGACTCTTTTAAGTTCTTGACAAATTATTTGGCAACTTTTAATGGAGAAGATGCACATGAATTGAGTGAAGCAAAGGAGGAGGCTGTGCATGCAATCATTGATTTTGTG | |||||||||