miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: ATGTGCCCGTCTTCTCCACCG
species: Oryza sativa
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|58679708|gb|CK068395.1|CK068395 72906rsicem_5725.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr

ATGTGCCCGTCTTCTCCACCG
||||||||.||.||.| | ||
TACACGGGTAGGAGGGCTTGC

EST sequence (targeted fragment marked with yellow):
GCACGAGGAGATGGGATCATTGGGTTGAGCCATTTCAGGCTGTTGAAGAAGCTAGGCTGTGGGGATATTGGCAGTGTATATCTCTCTGAATTGAGCGGGGCGAAAAGCTATTTCGCGATGAAGGTTATGGATAAGGCTTCATTAGCAAGCCGCAAGAAGTTGCTTCGAGCTCAAACTGAGAAAGAAATTCTGCAATGCCTGGATCACCCCGTTCTTCCTACATTGTACACTCACTTCGAGACTGACAAGTTCTCATGCCTGGTGATGGAGTTCTGCCCAGGAGGAGACCTGCATACCCTTAGGCAGAGGCAGCCGGGCAAATATTTTCCAGAGCAAGCTGTCAAATTCTATGTAGCAGAAATCCTCTTGGCATTAGAGTACCTGCACATGCTCGGCATCATATACCGTGATCTCAAGCCAGAAAACGTCCTCGTTCGGGAGGATGGGCACATCATGCTATCTGACTTTGACCTCTCACTCCGTTGCGCGGTGAGTCCAACACTAATAAAATCATCCAACC



gi|117216843|gb|CT845229.1|CT845229 CT845229 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

ATGTGCCCGTCTTCTCCACCG
|.|||||.|||||||||||
CATACGGGTAGAAGAGGTGGA

EST sequence (targeted fragment marked with yellow):
CACACACACTCATATCCACTACTACTACTAGCTACCGAGCACTGAGCACTGCACTCTGCTGCTCTAGAACTGAAGCTTTGCATTGGTTGGTTAGTGAGAGATTAATTATTCCAAGATGTTGGGCGGGATCATCGGCGGCCTGACGGGCAACAAGAACGCCCGCCTCAAGGGCTCCCTCGTCCTCATGCGCAAGAACGCCCTCGACATCAACGACTTCGGCGCCACCGTCATCGACGGCATCTCCGAGTTCCTCGGCCGCGGCGTCACCTGCCAGCTCGTCAGCTCCTCCCTCGTCGACCCCAACAATGGGAACAGGGGGAGGGTGGGGACGGAGGCGAGCCTGGAGCAGTGGCTGACGAGCCTGCCGTCGCTGACGACGGGAGAGTCCAAGTTCGGGGTGACGTTCGAGTGGGAGGTGGAGAAGATGGGCATACCCGGCGCCATCATCGTCAAGAACAACCACGCCGCCGAGTTCTTCCTCAAGACCATCACCCTCGACAACGTCCCCGGCCACGGCGCCGTCGTCTTCGTCGCCAACTCCTGGATCTACCCCGCCTCCAAGTATCGCTACAACCGCGTCTTCTTCTCCAACGACACTTCACTGCCGAGCAAGATGCCGGCGGCGCTGAAGCCGTACCGCGACGACGAGCTCCGCAACCTGCGCGGCGACGACCAGCAGGGCCCGTACCAGGAGCACGACCGCGTCTACCGCTACGACGTCTACAACGACCTCGGCGAGCCCGACTCCGGCAACCCTCGCCCTGTCCTCGGCGGCTCCCCCGACCGCCCCT



gi|117221435|gb|CT861444.1|CT861444 CT861444 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD

ATGTGCCCGTCTTCTCCACCG
|||||| ||||..|||| |||
TACACGTGCAGGGGAGGCGGC

EST sequence (targeted fragment marked with yellow):
AAACCGTGGCTCTCTCTCTCTCTGCAATAAGAAGTCGTCTTCCACCTCGAGCTCCTACTCTCCCCGGTGATCTCTCGCTTCGATTCGATTCTCTCGTGCAACTGCAAGACACAAGGCCAACTTGATTAGGAGGAGGAGAAAGAAGAAGAAGCGGTGATTGCTAGCTAGCTAGCGAGCTCCGTCGACTCTTGGCTGCAGCCATGATTACGGCGGCGGTGGCAGCCGTGGTGGAGTCCGCGTCGCCATCGCCATCGCCGGCGAGGAAGCGGTGCCGGCTGGGCGGGCCGGTCGTCGCGAACGGCGAGGGTGGTGCTGCTAGTAATACTACCACCAGTAGCGAGTTCCAGCTGCGGCACTGGCGCCCGGCGGCCGCAGGCAAGCGGGCGGGGCTGGGGATGCGGAGGCGGTGGGCGCCGCCGGAGATAGAGATCCCCGGCGGCGGGAGCGGAGTCGGAGTCGGAGCGCGAGGGTACACCAGCCTCCGGGACATCCTCTCGTCGCCGGAGTACGCCGCGTCGAGCAAGTCCAGCTCCCCCGCCGACGGTGGCAGCGGCGGCGGCGGCGGCGGCGGAGGGGACGTGCACATGATACGCCACCCGCTGGTGAAGCACGCGGCGTACGCCTACCTCCAGCTGACGCCGTCGGCGAGGGACGCCGCCGACGCCGCCGGCAGGAGGCGGCGGCGCAGCCGCGGCCCGCTCTGCCGCCTCCTCCTCGGCTGCCTCGGCTTCGTCGGCGCGCTCTTCGGACGGTGACTGACCTCGCCGTCTCCGGCGAGACACGCCCGCACGTCTCTTGACCTTTTGACCGATTTTTCTTGCCTTTTTTTTAATTTTCTGTTTTTTTACAGTGGATTATTAAGAGCAGAAATTGGATTTTTCCTGTCTAAAATGGGTTGTAATTTAGTTTCTGGAAAAAATAGTTTTGTAGGATTTTAGGGTGTGAGACAAAAAGATGATGGCAACAAATCAAAAAAAAAAAAAGATTTGCTTTGTTAACCCCTGATTGGGTAGGCTGGGGGGAAAAAAAAAAAAAAAAAAAAGGAAGCTTGGGCCTCCAGGGGGGGGGCGGGGGCCCAAATCCCCCTTTAGGGGGTCTCTTAATAACCGCGCTCCTCGGCCGCCCTTTTTAAAAGCCGGTGGGGGGGGAGACACAGGCGGGTAACCTCAAATTTATACCCTTTTACCGCAATTCCCCCCTTTCTCCCCCCGGGCGGCGAAAGTAGAAAAAAAGGAAGCGCGCCGCGCCCGGCGCCCTCTCTTCCCTCCCAATCACTCCTCGCTCCATCCTCATAGAT



gi|86505197|gb|CI147830.1|CI147830 CI147830 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa

ATGTGCCCGTCTTCTCCACCG
.||||||||| ||||||||
CGCACGGGCAGCCGAGGTGGC

EST sequence (targeted fragment marked with yellow):
TTACCCGAGCGAACATAAACCAGCGTGAGCTGCGATATGATTCTCATTAGTCATTACAGTTTGAAAATGCAATCTAATTAACCAAACTGAAAATTTAAACACTTCAACCAGACTCTGATGAAGAAGAAGGTCTTCTCATGGATCAAGAAGAAGCTGCCCTTCTGCAACAGCTGCCAGGTTTAAGCTTGATCACAAACTAACCCTAATACTATAAGGCCATCAAATTAAGGCCAGTGTTGTATTGTATCTTAATGATTATATTAACGCGGCGGCGGCGGCGGTGCAGACGCAGCAGGTGGAGAACGCCGTCGGCCTCGGCCCGCTGTCCGGCAAGCTGTATGCGACGGTGGACATCGACAAGGCCCGCGTCGCGCGGACGCGCACGGTGGAGCCGACGGGCACGCCGCGGTGGAAGGAGTCGTTCCACATCTACTGCGCGCACTACGCCGGCGACGTCATCTTCACCGTCAAGGCCGAGAACCCCGTCGGCGCCACGCTCATCGGCCGCGC



gi|88387807|gb|CI587895.1|CI587895 CI587895 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

ATGTGCCCGTCTTCTCCACCG
.|.||||||||.|||||||.
CGCGCGGGCAGAGGAGGTGGT

EST sequence (targeted fragment marked with yellow):
GAGGCAGTTTTACGCAGCGCCAACTCTCGTGTGTCTCTACTCGTTTTCAGATTATCTACAGTGTCGCGTGCGTTGTGTTCATCCGGTGTTCGTTCTCGCCCGCTCGCTGATTCGTTGGGATTTCCTGACAAGATCGGGAGGAGGAGCAGCAGGGGCGGGCAAGGGCGCAACGGCAGCGGAGGTGGCGACAGCGCTGGCCCGGCTCGCAAGACCGACAAGTGCCACAACTGCGGCAAACTCGGCCACTGGGCCAAGGACTGCAGGAGCAAGCCCAAGCAGGAGCAGGCACATGTGGTCCAGGAGGAGGATGAGCCCACGCTCATGCTCATGACGGGTGGCTGCATTGATGTGGTGGAGGAGACGGGCGCGCCGTGCGTGACACCGGCGCCGCCCGCGCCGCGGCCTCGCCTA



gi|38568706|gb|CD670921.1|CD670921 OsMR342 5MT resistant rice mutant cDNA library Oryza sativa Japonica Group cDNA, mRNA sequenc

ATGTGCCCGTCTTCTCCACCG
|||||||||.||.||||||
GCCACGGGCAGGAGGGGTGGC

EST sequence (targeted fragment marked with yellow):
GTGGCGGCCGTTCTAAAACTAGTGGATCCCCCGGGCTGCAGGCCACCATGGCCTCCTCCCTCCTCTCCTCCCCAAAACCCTCCTCCTTCTCCTCCGCAAACCCCACCTCCACTCCACGCCCACGCGCCAAAACTCTCTCCCCCTTCCGCGCCGCCGCCCCACGCTTTTCCCATGGCCTCGCCACCGCCGCCGCCGCCGCAAACCCTAGCGCCTCCCGCCGTTGCTACCACCGCGCCTTCGCCCGCCCCGTCCGGGCGTCCATGGCGCAGCCGGGGCGCCCGGAGTACGTCCCCAACCGCATCGACGACCCCAACTACGTCCGCATCTTCGACACCACCCTTCGCGACGGGGAGCAGTCCCCCGGGGCCACCATGACCAGCGCCGAGAAGCTCGTCGTCGCGCGCCCAGCTCGCCCGCCTTGGGGGTCGAAAATTATCGAGGGCGGGTTCCCGGGCTCCTCCCCCGAAGACCTCGACGCCGCGCGCTCCATTGCATCGAGGTCGGGAACACGCCCGGTGGGGAGGACGGGCACCGTGCCGGTCATTTGGGCCTTTGAGATGCAAAAGCACAATTGATGGTGGCTGGGAGGGCGGGGGCGCGCGGGGGCGGCCTCCCCCTTTATTGCACCACGAAACCAAT



gi|88572894|gb|CI664465.1|CI664465 CI664465 Oryza sativa (japonica cultivar-group) 14 days after transferring callus Oryza sativ

ATGTGCCCGTCTTCTCCACCG
|||| |||||| .|||| |||
TACAGGGGCAGCGGAGGCGGC

EST sequence (targeted fragment marked with yellow):
GGGCGACTCCTCTTCACACCACACGAGCCTTATCGCCTCCTAGATCTCTCTCGCGTTTCTCCCCGCCGNCCCCTCCTCGATCGATTCCATCGACGCGGCGGCGTATGCGCGACCTACGAAGCTTCCGACTCCCTCCCTNACTTCGTCCCGCTCCTCCCCACACATCTCTCCCCGCTCCACACCGCTCCCCATCGCTCCACGCCACTCCCCATCGCTCCCGCATCTACGGTGACGGCGGGAGATAGATGCGGTGGATGGATGCAGCGACAACAACGATGGATGGATGTTGCGGNGACGGCGGGAGATGGATGCATCGTCATCGGCTGAGGTGACGGGGAGATGCGGCGGCGGCGGCGACGACGGCGGTGGAGGAGGACACGAGGAGATACGGTGTCCTCGGCGGCGGCGGAGGCGACGGGGACATGC



gi|88398265|gb|CI588153.1|CI588153 CI588153 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

ATGTGCCCGTCTTCTCCACCG
|||||| ||||||||||| .
TACACGCGCAGAAGAGGTACT

EST sequence (targeted fragment marked with yellow):
TGCGCACTCCTCCCATCTATCAAGTTGTGGGCATGACTTGGTGATAGATAGATCCATGGGGTGGGCGGTCGCGCTGCACGGCGGCGCCGGGGACATCCCGCGCTCGCTGCCGCCCGACCGCAGGGAGCCCCGCCTCGCCACGCTCCGCCGCTGCCTCGACCTCGCCACCGCGCGCTCCGTTCCGGCCGCGCTGCCCTCGACGTCGTAGAGCTCGTCGTGAGTGGAGCTGGAGAACTGCCCGCACTACAACGCGGCGTGGGCTCCGTGCTCACCGCCGACGGCACCGTAGAGATGGATGCCGCCGTCATGGACGGCAACACCTTGCGCTGCGGCGCCGTCTCCGGACTCTCCACCGTCGTCAAGGCCGTCTCCCTCGCCAGGCTCGTCATGGAGAAGACGCGCACATCTACCTTGCC



gi|88356460|gb|CI624880.1|CI624880 CI624880 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J

ATGTGCCCGTCTTCTCCACCG
.|||||||||.||||| |||
GGCACGGGCAGGAGAGGCGGC

EST sequence (targeted fragment marked with yellow):
GGCGCACCGACCCCACTCGGATCCTCTCCTCCCCCTCCTCACTGCCTCTCTCCCGTCCACGAGCGGTTGGTTGATCGATCGATCGATCGGGGCGGTCCTTCGCCAGCCATGGCGGCGGCGGGGATGGCGCCCTCGCCTCCGGAGCCGGCGTTGCCGGGGGAGCTCAGCCTGGGGGAACTCAGGGCGGTGTCCATGCTCGGCCGGGGCGCCAAGGGCGTAGTGTTCCACGTCGTGCCCGCGGCGGCGGGGGAGGAGGAGGCCTCCATGGCGCTCAAGGCGGTCTCGCGGGAGGGGGCGCGGCACAAGAAGAACGGGAGCGGCGGAGAGGACGGGCACGGCGGATCTGGTTCGAGCGGGACGTGCTCATGTGCATGCAGACACCCGCTGCTCCCCTCCATCCGCGGCGTCTGCCACCGACGC



gi|88314969|gb|CI610028.1|CI610028 CI610028 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone

ATGTGCCCGTCTTCTCCACCG
|.|||||.|||||||||||
CATACGGGTAGAAGAGGTGGA

EST sequence (targeted fragment marked with yellow):
GACACACACTCATATCCACTACTACTACTAGCTACCGAGCACTGAGCACTGCACTCTGCTGCTCTAGAACTGAAGCTTTGCATTGGTTGGTTAGTGAGAGATTAATTATTCCAAGATGTTGGGCGGGATCATCGGCGGCCTGACGGGCAACAAGAACGCCCGCCTCAAGGGCTCCCTCGTCCTCATGCGCAAGAACGCCCTCGACATCAACGACTTCGGCGCCACCGTCATCGACGGCATCTCCGAGTTCCTCGGCCGCGGCGTCACCTGCCAGCTCGTCAGCTCCTCCCTCGTCGACCCCAACAATGGGAACAGGGGGAGGGTGGGGACGGAGGCGAGCCTGGAGCAGTGGCTGACGAGCCTGCCGTCGCTGACGACGGGAGAGTCCAAGTTCGGGGTGACGTTCGAGTGGGAGGTGGAGAAGATGGGCATAC



gi|41884214|gb|BX929045.1|BX929045 BX929045 Oryza sativa library (Han B) Oryza sativa cDNA clone y835f09p5, mRNA sequence

ATGTGCCCGTCTTCTCCACCG
||||| ||||||||. ||||.
TACACCGGCAGAAGGTGTGGT

EST sequence (targeted fragment marked with yellow):
TGCATTATGGCGGGGTGTTCGTCCAATCAGGTTCAGCCATGGCGCCCACCTCTCGCTCTCCCGCCGACCTCTTCCTGCTAGTCGCGCTCGCCTGCGCCGCGCCGCCGCTCCTGCGGGCGGCGGACACGCACCTCCACTTCTTCATGCACGACGTCGTCTCCGGCAGCGGCCAGACGGCGGTGCAGGTCATCAATGGCCCGACGTCGGCCAACGGTGGCGTCAGCACCGGCTTCGGAGACACCAACGTCGTCGACGACGCGCTCACGGAGACCTCGTCGGCGACGTCCCCCGGAGGTGGGGCGCGCGCACGGGTTCTACCTGATGTCGCCGCTGTCGAAGCCGAACGCTGATGATGTGCGTGAAACTCTACTTCACCGTCGGCGAGAACAACGGCAAGCACAATCGCGGTGATCCGGCACGACGACACCACGGCCACGGCGAGGGAGCTGTCCGTGCTGGGCGGCACCGGCCACTCCGGATGGCACCGGCTACGTGGTGTGGAAGACGGCCACATGAGCGCCCCCCCGCCGTGTACGCGCTGCCCCAAAAGTACCACGCGCCAAGGCCCAACCTACAAGCCTCCCCCCGTGTCTCCCTTGCACGCCGAGACACCTCGGCCTCCGTCCCGGCAACCCTGCGAGCGTGGCCAAACGTCCGGGGTAATAGTAGAATTGGGGAGCCGAGAAAGGTGGGGTGTGTGGAAGGCAACTTAGATGTCCAACACATTCGTGCCGACAGTAGGTCAGCTACCCTCACATCACCCTACTCGCCAAACCTTCGATGACACTAAACTCCACCCTCGCGCCAATCTCCGTTCCGATTCCCCGATAGCTCTCAACCCGCAACACCACTGCACACCACGTCCAAG



gi|88670276|gb|CI724392.1|CI724392 CI724392 Oryza sativa (japonica cultivar-group) 1 nuclei stage anther Oryza sativa Japonica G

ATGTGCCCGTCTTCTCCACCG
|.|.||||||||.||||| |
TGCGCGGGCAGAGGAGGTAGA

EST sequence (targeted fragment marked with yellow):
GGTGTGTGATCGATCATCTGGTGGTAGTGAACCGTGAACACACGGCGCGACAGGTAAACTACTGAGAGAGCGACTGCGAGATGGAGGAGACGGGCGCGTCTCCCGCGGCGGCGGCGGCGACGAGCGGGGAGCNGGGAGCGGCGGCGGGGACGATGAAGGTGGTGGTGGCCGTGGACGCGAGCGAGGAGAGCCTGAACGCGCTGTCGTGGGCGCTGGACAACCTCATCGGGCGCCGCGCCGGCGCCGTTTCGGTCGTCGTCGTCCACGCGCAGCACGGCCCCGANNACTTCGTCTACCCCGTCGCCGCGCACGGTATCGGATTCATAGCCTANGCCCCCGCCTCGGCGATCGAGTCCATGAGGAAGGCGCAGGAGGAGATCCTCAGCAAGGTCGTGT



gi|88377120|gb|CI597904.1|CI597904 CI597904 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

ATGTGCCCGTCTTCTCCACCG
.|.||||||||.|||||||.
CGCGCGGGCAGAGGAGGTGGT

EST sequence (targeted fragment marked with yellow):
GGCAGGCAGTTTTACCGCAGCGCCAACTCTCGTGTGTCTCTACTCGTTTTCAGATTATCTACAGTGTCGCGTGCGTTGTGTTCATCCGGTGTTCGTTCTCGCCCGCTCGCTGATTCGTTGGGATTTCCTGACAAGATCGGGAGGAGGAGCAGCAGGGGCGGGCAAGGGCGCAACGGCAGCGGAGGTGGCGACAGCGCTGGCCCGGCTCGAAAGACCGACAAGTGCCACAACTGCGGCAAACTCGGCCACTGGGCCAAGGACTGCAGGAGCAAGCCCAAGCAGGAGCAGGCACATGTGGTCCAGGAGGAGGATGAGCCCACGCTCATGCTCATGACGGGTGGCTGCATTGATGTGGTGGAGGAGACGGGCGCGCCGTGCGTGACACCGGCGCCG



gi|88434352|gb|CI589417.1|CI589417 CI589417 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone

ATGTGCCCGTCTTCTCCACCG
.|.||||||||.|||||||.
CGCGCGGGCAGAGGAGGTGGT

EST sequence (targeted fragment marked with yellow):
GAGGCAGTTTTACGCAGCGCCAACTCTCGTGTGTCTCTACTCGTTTTCAGATTATCTACAGTGTCGCGTGCGTTGTGTTCATCCGGTGTTCGTTCTCGCCCGCTCGCTGATTCGTTGGGATTTCCTGACAAGATCGGGAGGAGGAGCAGCAGGGGCGGGCAAGGGCGCAACGGCAGCGGAGGTGGCGACAGCGCTGGCCCGGCTCGCAAGACCGACAAGTGCCACAACTGCAGCAAACTCGGCCACTGGGCCAAGGACTGCAGGAGCAAGCCCAAGCAGGAGCAGGCACATGTGGTCAGGAGGAGGATGAGCCCACGCTCATGCTCATGACGGGTGGCTGGATTGATGTGGTGGAGGAGACGGGCGCGCCGTGCGTGACACGGCGCCGCCCGCGCCGCGGCCTCGC



gi|44665001|gb|CR278435.1|CR278435 CR278435 Oryza sativa library (Han B) Oryza sativa cDNA clone p589h10p5, mRNA sequence

ATGTGCCCGTCTTCTCCACCG
||||||| ||| .|||||||.
TACACGGTCAGCGGAGGTGGT

EST sequence (targeted fragment marked with yellow):
TGGGAGCGCGCATGTGTTGGTACCCGGGAATCGGCCATTATGGCCGGGTTATGCAAGATGACAGGAAATGGATTGAATTTGATGATGACAACCCTAGCATACGCAAGGAGGAAGAGATTTTAAAGTTATCTGGTGGAGGCGACTGGCACATGGCTTACATTTGCCTGTACAAAGCTCGTGTTATCTGAATTGGAATGCCAGACAGGCTGATGAGCTGATTTGTTTACATTTCTCACGTTGCCAGTAGTTTGCTTGCCTTTTGTAATGCATGAGCGAACGTATAATTGATTTTTCCAGTTTGGTTCAAACTGAGAAGTCAGCATGTGACTTGCATTGGTGCTGGTGTCAGGTCGGTGGTCACTGGGACTTTAGACCTGTAATCATGAGATGTTGAACTAGAATATCATACAGTAGTAAACAAATATATCCTGCAACGAAACTGAGCGGAAAATCTACATCATATCATGGCCAAACAAAAACCCACAAAACAACCCACCCAACCTG



gi|88694391|gb|CI738429.1|CI738429 CI738429 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro

ATGTGCCCGTCTTCTCCACCG
|.||.||||||..|||| ||.
TGCATGGGCAGGGGAGGCGGT

EST sequence (targeted fragment marked with yellow):
GGGTGGGCGGAGGGGGCCTGCGGTGGCGCGGGCGAACTGGGATGGCGGCGGCGCGGGCTGAGGGCGTTGGTGACGGCGCGGGCGGAGGGGGCCAGCGGCGGCGCGGGCGGAGGGCGTTGGTGATGGCACGGGCGGAGAGGGTCGGCAGCGGCGCGGGCAGAGGGCGTCGGCGACGGCGCCTACCACGACTACCANGCGACGACCATGACAACCACTGGCCCAGTCGCTGCCCCTCCCCTCGACCCCTCCCCTCTCACATCTGGCGGAGGGGACGGGTACGTGTNGGCGGNGGCTGTGTGGGCTTGCTACCCCAACCCACCCNCTCCACATCCGGACGGAGGGGGCAGGAGGCTGTGGCGGC



gi|88728152|gb|CI751662.1|CI751662 CI751662 Oryza sativa (japonica cultivar-group) 5 days after pollination pistil Oryza sativa

ATGTGCCCGTCTTCTCCACCG
.||||||.|||.|||| |||
GGCACGGGTAGAGGAGGCGGC

EST sequence (targeted fragment marked with yellow):
AAAAAAAAAAGAAAAAAAATCCGCACACAGCAAAAGCCTCTCCACTACCTCTCCCTCCACCTGTCGCCTAAACCCTAGCTCGCATCTCGAGGCATCTCGCTTCACCTCGTCGTCGCGGTCGCCGGAGCCGGAGCCGGAGGCGGCGGAGGAGATGGGCACGGGAGGCGGCGAGGGGGACAAGTCGGCCGTGCTGCCGCGGGAGGCGCTGCTGGCGCTGGGGCTCGACCAGCGCACGGGGGAAAAAGCTCTGGTCAACAGCAAGGTCACCGCCCACCCTCGCCGCCGTCATACCCGAGGCTGGTATAAGTGGATGTGATAAGAAGGTGGGGAACCTCCTGTACACGGTTGCCACTAAATACCCAACCAATGCGCTTGTCNATCGTCCGGTAGTCATT



gi|58663311|gb|CK051997.1|CK051997 54797rsicek_4586.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr

ATGTGCCCGTCTTCTCCACCG
||||||||.||.||.| | ||
TACACGGGTAGGAGGGCTTGC

EST sequence (targeted fragment marked with yellow):
GCACGAGGAGAAAACGTCTCGTTCGGGAGGATGGGCACATCATGCTATCTGACTTTGACCTCTCACTCCGTTGCGCGGTGAGTCCAACACTAATAAAATCATCCAACCCGGACGCTGAAGCACTCAGTGAAGAACAGCCAAGGTTACTGTGTCCAGCCAGCATGCGTCAGAGCCATCCTGCGTGATTCAGCCATCATGTGCA