| mature miRNA: ATTCGTCTCGCGGTTTCCAGA species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|27921098|gb|CB096906.1|CB096906 AF53-Rpf_10_E13_T7_051.ab1 IRRI Drought Stress Panicle Library Oryza sativa Indica Group cDNA ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): GTGTAAAGTTTTGGCGTGTCACATCTGAAGTATTAAACATAGTCTAATATNAAAACAAATTACAGAATCCACCTGTAAACTGCGAGACGAATTTATTAAGCCTAAATAATCCGTTATTAGCAAATGTTTACTGTAGCAACACATTGTTAAATCATGGAGCAATTAGGCTTAAAAGATTCGTCTCACAACTTAGTCACAATATGTGGAATTAGTTTTGTTTTTAGTCTATATTTAATACTTCATACATATGTGTTCAAACGTTCGATGTGATAGGGTAAAAAAATTTGGGGTGGGATTTAAACAGGGCCTTAGTTAATTATAAAATCAGTAGTTATAAGTGTTATAGTTAAACTTGGACATATATTGATCCTATATATCCTGTAAACCCTAGTTAGTTAATTATACCATAAATCTTGCTTCAGCTTTTGCGTTCTAGCTTAAGTAAACTTAACATGGTTGACGACAAGTTTCAAGTTAGCTAATAAAATGAAAAATATAAACTCATGTTTAATTAACACTAAATTAGTTGTCTTATAAGCTAGGTTTAACGTGAACTTCAGCTAGTTGGGTAGTATACAATGTGTGATAGAAAAA | |||||||||
gi|88437014|gb|CI523964.1|CI523964 CI523964 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): AAACAAAACTGAGGTTGTGTTTAGATTAGGGGTGTAAAGTTTTGGCGTGTCACATCGGATATACGGGCACACATTTGAATATTAAACGTAGTCTAATAACAAAACAAATTACAAAATCCGTATGTAAACCGCGAGACGAATTTATTAAGCCTAATTAATCCGTCATTAGCAAATGTTTACTGTAGCACAACATCATCAAATCATGGCGTATNTAGGCTTAAAAGATTCGTCTCATAATTTACACGCAATCCGCGTAATTAATCATTTTTCCGTTTATACTCTCTCTTTCATATAGATGTTAATACTCTGTAAATATGTGACANTGCGCTCGAACCCCCCCTCTCTTCCAGTAGCGCACACCTGTGCGGCGC | |||||||||
gi|58670885|gb|CK059571.1|CK059571 55078rsicek_6038.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): GGATCCCCGGGCTGCAGGAATTCGGCAGAGGGTTGATTGACTGGTATGTTCAAGTGTGTAACCATGTCTTGTATTGTATTCTGATTTCTGACTGGTATGTTCCTTCAAGTTAACTTTGCATAGGCTTCGGTTAGTTCGGTACAAAAGATCCAATTTTCTTTTAAGAGTTGGTTTGAGGTACTCCATCTTATTCATTGGGATGAGTAGGTGATGGACATAAGTCATCGCAATTCATCATCTTTGCCAACATAGGCCGTGTTTGGATCCAGGGTGAAAAGTTTTGGCGTGTCATATTGGATATACAGACATATATATTTGAAGTATTAAACATAGACTAATAACAAAACAAATTACAGATTCTGCCTGTAAACTGCGAGATGAATTTATTAAGCCTAATTAATCCGTTATTAGCAAATGTTTACTGTAGCACCACATTGTCGAATCATGGAGCAATTAGGCTTAAAAGATCTCGCAATTTACACACAATCTGTATTTTTTTCCGTTTATATTTAATACTCTATACATGTGTCCAAACATTCGATGTGAGATGGTGAAAAATTTTGTCAGGGGATCTAAACAGGCCCATAATTGTAGGAAACTGCAAACTAATTAAGGT | |||||||||
gi|117248573|gb|CT862777.1|CT862777 CT862777 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): ATACACTCCTCTTCTCATTAAGCCCACTAGCCGAGTTGCGACCGCCGCCGCCGCGATGGTCGCCGCCGTCGTGCGCCATTGCCGGAGCCACCGCTGCTCTGCGCCCCCAACCTCCAACAGCCACCACCGCCGCCGCTGGCTCCCGTCCGATCTAGCGCATGCCCCCGCACTCTTCGCCGGACCTAGCGAAGGGGGAGAAGTCAAGACTGGATCCATCCCCAATCGTGGCTACGGCTGCTGACGACATCCACGCCGCCGCTGCGTGCCTCGATCCGATCCGCGACAACCAGGTGCTCTCTCTCCGTATGCATCGGTTGAATTAAATCCGGACCCTGGATGGATTCCCTCGATTTCTCCTCGTGGTTTCCTTTTTCTTTTATTGTTCTTTTTGTTGTAGCATTCTTCTCGTGGTTTTCGATCATGCATAGGAAGAATGTTGGTTTTAAAAAAAATTATGTGTTCACTGATTGCAATGCTTCAACATCCCTTGACCCAAAAGTGAAATGATGCTGCAGATGTCGCATGAGGGCAAGTACTATAATGCTAGATGAATTGCCCCTAAACTAAAACATGTCACATCAGACGTTTAACCGGATGTCGGAAGGAGTTTCCGGACGCGAATGAAAAAACTAATTTCATAACTCGTCTGGGAACTGCAAGACGAATTTATTAAGCCTAATTAATCTGTCATTAGCACATGGTGAGTTACTGAAGCCCTTATGGCTAATCCAGGGACTAAATTAGGCTCAAAAGGATTCGTCCTCCCCGATTTCCCAGGCAAAACTGGGGGAATTTAGTTGATCTTTTTCTTCCCTATTTTAATTGGCTCCCTGGCTTGGGTCCCAAATTTTTCCGAATGGGAAAATTTTTTTG | |||||||||
gi|86503740|gb|CI146373.1|CI146373 CI146373 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): GGTAAGATGAAAAAAAGAAGAGAACTTCTAAAGTCAATCTTGGAATGGCAGCACAATCCATTCGCCTCACTCGCACTTGCCATTCCACTCCAACTCTCCTCTACCTGCAGCGAGCTGCCATTCCCCTCCAACTCCCCTCTACCTGTAGCACATTTTTAGCAGCAGATTGGTCATATCATCAAAACATCAATCTATTCATGAACCTGCAAGGCAAATAGCTTAAGGCTGTGTTTAGATCCAGGGGTGAAAATTTTTGTCGTGACACATCGGATATACGGACACACATTTGAAGTACTAAACGTAGTCTAATAATAAAACAAATCATAGATTCCGCCTGTAAACTGCGAGACAAATTTATTAAGCCTAATTAATCCATCATTAGCAAATGTTTACTGTAGCACCACATTGTCAAATCATGGAGCAATTAGGCT | |||||||||
gi|88764810|gb|CI773928.1|CI773928 CI773928 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): TTGTATCATATATATGACAGATAGAGTAAACATTAAAATGCCACTATTGTACTCTCTCTGTCACATGTCAACTCGATATAATCTAATACTCCCTCTGTTCCTAAATATAAAAGATTTTGGTGAGATGTGACATATACTAATACAACGAATCTAAATAGACTTATGTCATATGAAACCAAAATCCCTTATATTTAGGGACGGAGGGAGTACTACATATATGGACAGATCTGTCTACATACATAGGCTATGTTTAGATCCAGGGGTGAAAAGTTTTAGTGTGTCACATCGGATATACGGACACACGTTTGAAGTATTAAACGTATACTAATAACAAAACAAATTACAAATTTGCTGTAAACTGCGAGACGAATTTATTAAGCCTAATT | |||||||||
gi|88464219|gb|CI532154.1|CI532154 CI532154 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): AGGTTAAATTTGTACTTCCATAGGAAAACCTCCACGTTTAGTTCCCAAAAAGTTTTTCTCAAAAACATCACATCGAATCTTTAAACACATGCATGGAACATTAAATGTAGATTAAAAGAAAAACTAATTGCACAGTTAGAGAGGAAATCGCGAGACGAATCTTTTGTGTCTAATTAGTCCATGATTAGCCATAAGTGCTACAGTAATCCACATGTGCTAATGGCGGATTAATTAGACTCAAAAAATTCGTCTCGCGGTTTCCAGGCGAGTTATAAAATTAGTTTCTTCATTCGTGTCCGAAAACCCCTTCCGACATCCGGTCAAACATCCGATGTAATACCCAAAANTTTTCTTTTCGCGAACTAAACAGGG | |||||||||
gi|163917916|gb|EG713968.1|EG713968 Os6CPREST1817 6cm rice panicles Oryza sativa Japonica Group cDNA clone 6CPR-K3B01SA, mRNA se ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): AAAATGGCAGAGCATTTTGCAGGGCAATGTTGCTGACCACTTGGAGAAAAAACACACAAGTTTTTGGCGTCGTACCAGTACCAGTCGACATGTAAATATGGGCCTGTTTAGTTTCCAAACAAAATTTTTCACGCTGTCACATCGAATGTTTGGACACATGCATAGTGTTAAATGTAGACAAAAAAAAAACCAATTACACAGTTCGGCAGGAAATTGCGAGATGAATCTTTTAAGCTTAATTGCGCCAGGATTTGACAATGTGGTGCTACAATAAACATTTGTTGATGACGGATTAATTAGGCTTGATAAATTCGTCTCGAAGTTTTCTGGCAAAATCTGTAATTTGTTTTGTTATTAGACTACGTTTAATACTTTAAATGTGTGTCCGTATATCCGATGTGACATGTAGGGGCAAATTTTTTTGCCAACTAAACAGGCCCTATATATGCCATCAATTTGAATATGAACAGAAAATTTTCTAAGCATATATACATAAATATTGTA | |||||||||
gi|88507790|gb|CI435296.1|CI435296 CI435296 Oryza sativa (japonica cultivar-group) callus suspension-cultured cells treated with ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): AAAACAAATTACAGATTATGCCTGTAAACCGCGAGACGAATTTATTAAGCCTAATTAATCCATCATTAGCAAATGTTTACTGTAGCATCATATTGTAAAATCATGGCGTAATTAGGCTCAAAAGATTCGTCTCACAATTTACATGCAAACTGTGCAATTGATTTTTTTCGTTCACATTTAATGCTCTATACATATGTCCAAACATTTAATGTGACGGAATTTTTAGAAGTTTGAAGGGAACAACATTTAATGCGACGGAATTTTTAGAAGTTTGAAGGGAACTTAAAAACTGCCTAAATCAATAAGAACAATGGTGTTACAATAAAAAATAATAGGTATACAGTGACTAGACTAGAGGGCAATTGGGATTTGGGATTGCTTCATTTATGATGTATCCAAGGCCAACT | |||||||||
gi|88692738|gb|CI736313.1|CI736313 CI736313 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): TGGCTTTATATTGTTTGTTCAGATCCCTCTACTATTTCTTTCTGCATCCGCCANTGGGTCCGTGGGCAGTCGTGCCATGCTAGACTACAAGTTGAGGCACAGGCCCAAGTTTGGCATGGGCCAGCCAACATGCGGTGCCGTGCCTAGGTCAGGCTGCCAGCATGCCTCGGGCCGATCCAATCCATTTGGTCACTGGGCCTGTTTAGTTCCAAAAAGTTTTTCCCTAAAACCATCACATCGAATATTTGAAGATATGTATGGAGCATTAAATGTAGATGGAAAAAACTAATTGTACAGTTATGATGGAAATCGCGAGATGAATCTTTTGAGCTTAATTAGTCCATTATTAGCCATAAGTGCTACAGTAATCCAC | |||||||||
gi|88257044|gb|CI359432.1|CI359432 CI359432 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): CGGTATTTTTTTTCGCTAGCACTCAGGCCTTATTTAATTCGCGAAAAGAAAATTTTTGTGTGTCATATCGAACATTTGACCGGATGTCAGACGGGGTTTTGGGACATGAATGAAAAAACTAATTTCATAACTCGCTTGGAAACCGCGAGACGAATTTATTAAGCCTAATTAATCTGTCATTAGCACATGTGGGTTACTATAGCACTTATGGCTAATCATGGACTAATTAGGCTCAAAATATTCGTCTCGCGATTTCCAAGCAAAATGTGCAATTAGTTTTTCATTTTATCTATATTTAATATTCTATGTATATATCCGAAGATTCGATGTGATATTTATGGGAAGAAAATTTTGGGAACTAAACAATGCCTCGATATGCCGGGAAATGTCCTGTCACAGTGTCTACTGGTGAAAATTCTGTGGTAGTAGTTGTTTG | |||||||||
gi|29630842|gb|CB635851.1|CB635851 OSIIEb16K13.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb16K13 3', mRNA sequence ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): GTTCAAAAAAGCTCTGTCTCATGTGGATTCCCAAGTTAAAAGTATTCCAGCAACAGCTCAGGTTGCAGCACAACAAGGACACTATCTTGCTGAATGTTTTAACAAGATGGACCAATGCAAAGAACATCCAGAAGGTCCGTTGCGCATGACAGGAACAGGATCAGGACGGCACAATTTCCGCCCATTCCGGTACAAGCATCTTGGGCAATTTGCACCCTTGGGTGGAGAGCAAGCTGCTGCAGAGCTCCCAGGCGACTGGGTTTCCATGGGCCATAGCACTCAGTGGCTCTGGTACTCTGTATATGCAAGCAAACAAGTGAGTTGGCGCACACGGATGCTGGTGGTATCCGACTGGACTCGGAGGTTCATATTTGGGAGGGATTCAAGCCGAATTTAGCACTGCCAAATGCTGCATCATTTCTTGTAGAGATAACATTGCTGAATAATTTTGTTGAGTTTGGCTGTGTTTAGTTCGTGTGCCAAAATAAAATTTTTGAAGTATACGGACACATTTGAAGTATTAAACGTAGACTAATAACAAAACAGATTACAGATTTCGCCTGTAAACTGCGAGACGAATCTATTAAGCCTAATTAATTCGTCATTAGCAAATGTTTACTGTAGCACCACATTGTCAAATCAAGACGTAATTAGGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTGTAATTGGTTTTTTTCGTCCATATTTAATGCTCCATATATGTATTCAAACATTTGATGTGACGGAAAAGTTGAAAGTTTGAAGAAAAAAGTTTAAATATAAACCATGCCTTTGTAACAAAAAAAG | |||||||||
gi|38565821|gb|CK085274.1|CK085274 OsSM01005E11c Oryza sativa leaf cDNA library Oryza sativa cDNA clone OsSM01005E11, mRNA seque ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): GCACGAGGTTTTTCCCTAAAAATATCACATCGAATCTTTAATACATGCATGAAACATTAAATATAAATAAAATAAAAAACCAATTGCACAGTTCGCATGTAAATCGCGAGACGAATCTTTGAGCCTAATTAGTCCATGATTAGCCATAAGTGCTACAGTAACCCACATGTGCTAATGACAGATTAATTAGGCTCAAAAGATTCCACATGTGCTAATGACAGATTAATTAGGCTCAAAAGATTCGTCTCACGGTTTCCAGGTGAGTTATGAAATTAGTTTTTTCATTCGTGTCCAAAAACCCCTTTCCGACATCCGATCAAACATCCGATGTGATATTTAAAAATTTTGATTTCACCAACTAAACAGGGCCTATGTTGACATATTCTAGGATGATGAATCTGGACATATGTATGTCCAGATTCGTAGCTCCCCATCGGATGGCCTAATCAGCTAAAGAAAAAGGTAAATTTTAAATTTTCAAACTTAATTTTTAGATTGATTTTGAGATATTTTCAACGTATTTTCTTTTTCAGCATTGGTTTTAAGTCACCAAGAACACATATATAAAAGTTTTATCTATAAATTAATTTTTATTCCCTAATAAGCCGTTTTGGCTTATC | |||||||||
gi|44673568|gb|CR287002.1|CR287002 CR287002 Oryza sativa library (Han B) Oryza sativa cDNA clone p751h10p3, mRNA sequence ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): TCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTGAACAAATGAAAATGATTCTGATTTTGCTATTCATTTGTCAAATATAAATACAGTATAATTGCAGTGTAATCGCATTGTAACTTGCACAAATGAAAATGATTCTACAATCCAGAATCCACAATATCCCTTAAGCCATAGGGACTTCATACATCATAAAGCTTCCGTTGGTCAATGGGAATGTGATGCTCATTAAGGGGGTGTTTAGATCCATGGGTGTAAAATTTTGGCGTGTCACATCGGATATACGGACACACATTTGAAGTACTAAACGTAGACTAATAACAAAACAAATTACAGATTCCGCCTGTAAACCGCGAGACGAATTTATTAAGCCTAATTA | |||||||||
gi|88738976|gb|CI762484.1|CI762484 CI762484 Oryza sativa (japonica cultivar-group) root of seedling gamma-irradiated(45Gy), immi ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): GAATTACAGAATCCGTCAATAAACCGCGAGACGAATTTATTCAGCCTAATTAATCCGTCATTAGCAAATGTTACTATAGTCTGTAGCACCACATTGTCAAATCATAGAGTAATTAGGCTTAAAAGATTCGTCTTGTAAATTAGTTGCAATCTGCAATTAGTTATTTTTTAGCCTATATTTAATACTTCATGCAGGTGTTCAAACGTTCGATGTGACAGGGCGAAACATTTTGAGATGGGATCTAAACATGGCTATAGTTTCAATTGTGTTGCATTGCAATATGGGACATTTTGGAATTAGGGCCAAAATGAGTTTGAGCCCTTCAATTTTTTAACATCATATAAATATTGTGAAAGTTGGTTCAGTGACATATAA | |||||||||
gi|86901156|gb|CI306345.1|CI306345 CI306345 Oryza sativa (japonica cultivar-group) heat treated callus Oryza sativa Japonica Gro ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): AACGCGTTATTAATACGTAATCAGCAAGTCTTAGGGCATGTTTAGATGGCAAACAAAAATTACCCCAACATATCGTATCGGATGTACAAACACACATTTAAAATATTAAACGTAGTGTAATAATAAAATTTTGCCTATAAACTGCGAGACGAATTTATTAAGCCTAATTAACTTGTCATTAGTAAATGTTTACGGTAGCACCACATTTTTTATCAAATAATGACGCAATTAGGCTTAAAAGATTCGTCTTGCAATTTACTGGCGAACTATGTAATTATTTTTTTCTACATTTAATACTTCATGCATGTATCTGAACATTCAATGTGACAGCGTGAAAAATTTTATTTGGGAATTAAACATATCCTTAATCATCAGCACTTC | |||||||||
gi|88243810|gb|CI242932.1|CI242932 CI242932 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): TTTTTTTTGCAATCAACAGTAAAAGAAATTCATTAGAATGAAAATTACAGTGTTACTTAGGGCCCGTTTAGTTCCCAAAATTTTTTCTCAAAAACATCACATTGAATCTTTTGACACATGTATGAAGTATTAAATATAAATTAAAAGAAAAAACTAATTGCACAGTTATGGAGGAAATCGCGAGACGAATCTTTGAAGCCTAATTAGTCCGTGATTAGCCATAAGTACTACCGTAACCCACATGTGCTAATGATGGCTTAATTAGTCTCAAAAGATTCGTCTCGCAGTTTTCAGGCGAGTTCTGAAATTAGTTTTTTCATTCGTGTTCGAAAACCCCTTCCGACATCCGGTCAAACGTTCGACATGACACCTAAAAATTTTCTTTTCCCCAACTAAACATAGAGGAAAGAAAGAGCAACCTCCATTACATTACATGATTACAATGAATTAAACATACTAACGAGTCAGTGATCAGCAGTGGAGTTAGGATTAGTAAGGTAGTGCAAGCATGGCAGGCGAT | |||||||||
gi|117211619|gb|CT851670.1|CT851670 CT851670 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): ATGAAAAGCAAAGCGAGCAGCTGAGCCCCGACGAGGTGGGGGAGAGATGAGGGCGGTGGTGATCGCGCGCGCCGGCGGGCCGGAGGTGCTGGAGGAGCGGGACGTCGGGGAGGGCCTCCCGCCGCCGGGGGAAGGCGAGGTGCTCGTCGGGGTGTCCGCCGCCGGCGTCAACCGCGCCGACACCGTCCAGCGCCAGGGCCGGTACCCCGCGCCGCCCGGCGCGTCCCCTTACCCGGGCCTCGAGTGCTCCGGCACCATCCTCGCCCTCGGCCCTAACGTCCCCTCCCGCTGGGCCGTCGGTGACCAGGTGAATCGGTGATTGCCGCCGCCGCTGCCGTTTGGATTAGGACGTTAGGTTAGGGCGTGTTTAGATCTAGGGTTTAAAGTTTTAGCATGTTACATCGGATATTATATAGGGTGTCGCATGAGGTGTTCAGGCACTAATAAAAAAATTAATTACAAAATCCGTCGCACTAATAAAAAAACTAATTACAGAATCCGTCGGTAGACTGCGAGACGAATTTATTAAGCCTAATGAATCCATCATTAGCAAATGTTTACGGTAGTACCACATTGTCAAATCATGGAGAAATTAGGCTCAAAAGATTTGTCTCGCAAATTAGTCGCAATCTGTGTAATTAGTTATTCTTTTAGCATATATTTAATACTTCATGCAGATGTTCAAACGTTCTATGTGATAGGATGTAAAATTTTGGGAGATTTGTTTTTTCCCTTGCAGGTGTGCGCGCTGCTCAGCGGCGGCGGGTATGCGGAGAAGGTGGGTGGTGCCGGCGGGGCAGCTGCTCCCGGTGCCGGAGGGGGTGTCTCTGACGGGCGCCCGCCGGCTTGCCCCGGGTGGGCTGCACCGTTTGGTCGACCGTTTTCTGACAGCCCCCTCTTCCCAGCGATCGTTCTTATCCTTGGGGGGTTAGTGGAATTGGGTCCTTTGCTTTTCAGATTGAAAAGCCCTTTGGATTTAAGGTTTTTTTTTTTGCGGGTGTTGGGGAAAAATTAATTTCCCTCAAAGGTTTGGGGGGCGTTTTTTTTTTACCATCAAAAATTGAAAATTTTCTTTTCCCGTTGTAAAAAAAAAAACAAATTGAAAGGGGGGGTTTTTTTTTCTTTTTTGGCAAAACCTTCGGGGGGTTTTTTTTTTTCTTTGCGGGCCCCCTTAAAACGTTTTTTTTGTTTTGGTTTGTGGAAGATTTTTTTTTTTATTTTTTTTTTTTTTTTTTCAAGAAAGGAGGGGGCCTCTTTTTTTATTTGTATGTAATATAGGAACCTCTCCCGCCACCACCCCCCCCCCCTTTCCTTTG | |||||||||
gi|88483338|gb|CI420609.1|CI420609 CI420609 Oryza sativa (japonica cultivar-group) leaf of seedling 50ppm CuSO4 for 3 days Oryza ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): ACTAATATCTGCAAATATATTTACTTCAANATTATTTTTATATGGGCTTATAGCAGTAGTTAGCTCAAANTTACCTCTGAGCGAAATCTTAAGCTTGGAAGTGTGCCCAATATCACCACCATCCAACCCCTAACACCTGCTTTAGTTCGCGAAAAGAAAATTTTTGGGTGTCACATCGGACGTTTGAACGGATATCGGAAGGGGTTTTCGGACACAAATGAAAAAACTAATTTCATACCTCGCCTGCAAACCGCGAGACAAATTTATTAAGCCCAATTAATCCGTNATTAGCAAT | |||||||||
gi|89164775|gb|CI101863.1|CI101863 CI101863 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): TTTTTTTTTCGGACACAAATGAAAAAACTAATTTCATAACTCGCCTGGAAACCGCGAGACAAATTTATTAAGCCCAATTAATCCGTCATTAGCACATGTGGGTACTATAGCACTTATGGCTAATCATGGACTAATTAGTCTTAAAAGATTCATCTCGTGATTTCCATGCAAACTGTGCAATTAGTTTTTTATTTTTATCTATATTTAATACACCATGTATGTGTACAAATATTTGATGTGATGTTTTTGAGAAAAAAAATTTAGGAACTAAACAAGGCCTAAACAAAAAAAAAAGTCCAAAATATAGTCTCTGGTCTCTCCCACCACCTTCATGGCATTAAAGCCTCACCTACTGGCGGCTGCTGGAAACGGATCATCGGCAGTGGAGGATAAAATGCGGATAACCGGCAAGATCGTCTGGGCAGAGCAGGCCGAGCAGATCGCGGAACCAGTTCATCTCCATGTCGAGGTGCACGGTGTCGCGCACGTGCACGCCTCTCTCCCGGTAGAAATCCGGGCTGAGCGCCGTGGCGCCGCCCACCGCGAAGTTGGCCC | |||||||||
gi|86826706|gb|CI364236.1|CI364236 CI364236 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): GCAATACAACAGTAAAAGAAATTCATTAGAATGAAAATTACAGTGTTACTTAGGGCCCGTTTAGTTCCCAAAATTTTTTCTCAAAAACATCACATTGAATCTTTTGACACATGTATGAAGTATTAAATATAAATAAAAAGAAAAAACTAATTGCACAGTTATGGAGGAAATCGCGAGACGAATCTTTGAAGCCTAATTAGTCCGTGATTAGCCATAAGTACTACCGTAACCCACATGTGCTAATGATGGCTTAATTAGTCTCAAAAGATTCGTCTCGCAGTTTTCAGGCGAGTTCTGAAATTAGTTTTTTCATTCGTGTTCGAAAACCCCTTCCGACATCCGGTCAAACGTTCGACATGACACCTAAAAATTTTCTTTTCCCCAACTAAACATAGAGGAAAGAAAGAGCAACCTCCATTACATTACATGATTACAATGAATTAC | |||||||||
gi|44676617|gb|CR290051.1|CR290051 CR290051 Oryza sativa library (Han B) Oryza sativa cDNA clone y765b01p5, mRNA sequence ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): TTTCGTATTTACTCAATCATGTAGTGTGGAGTAGCTAACTTCATTTGCCAATCGGCAGACTAAGACCTCGTTTAGTTGGAAAAAAATTTTAGGTTTAGTTATCACATCGAATATACGGATACATATTTAAAGTATTAAAAGTACTCTAATAATAAAATAAATTAAAATAAATTACAGATTCGGCCAGGAAACTGCGAGACGAATTTATTAAGCCTAATTAATCTGTCATTAGCAAATGTTTATTGTAGCACCATATTATCAAATTATGGCGTAATTAGACTTAAAAGATTCGTCTCGCAATTTACACGCAAACTGTGTAATATATATATTTTTTCACATTTAGTACTTCATGTATGTGTCCGAACATTCGATTAGATGAAGGAAAGACTTTTTTTTTTAACTAAACGAGGCCCAAACAAAGATGCAAAAGGAACATAGGTGGAGCCAGTAGCACAAAGCATGACACACACGGTGATGTCGTTCTGAAAAATATCAACAATTGAACACGCTTGGGAGAGCTTGTACTGCCACTATATACCATATCTCTGTCCCGTAAAATCTCGAACGAAAATTGATGCTATGGTAGGTTCAATTGGTATGGATACTTAAGGGGGTTAAGTCTAATGGGTTTCCAAAAAATTTGGCAAATCTTTTTTATACAGACAT | |||||||||
gi|86487912|gb|CI130545.1|CI130545 CI130545 Oryza sativa (japonica cultivar-group) Panicles less than 5cm stage and Panicles two ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): GAACGTATTAACGTAGACTAATAATAAAACAAATTACAGATTATGCCTGTAAACCGCGAGACGAATTTATTAAGCCTAATTAATCCATCATTAGCAAATGTTTACTGTAGCATCATATTGTAAAATCATAGCGTAATTAGGCTCAAAAGATTCGTCTCACAATTTACATGCAAACTGTGCAATTGATTTTTTTCGTTCACATTTAATGCTCTATACATATGTCCAAACATTTAATGTGACGGAATTTTTAGAAGTTTGAAGGGAACAACATTTAATGCGACGGAATTTTTAGAAGTTTGAAGGGAACTTAAAAACTGCCTAAATCAATAAGAACAATGGTGTTACAATAAAAAATAATAGGTATACAGTGACTAGACTAGAGGGCAATTGGGATTTGGGATTGCTTCATTTATGATGTATCCAAGGCCAACTATGTTGAACGACCCCATGAATGAGTAAAACCCCACAGCTCAACATTCTTCAGTTCAAAATCTGGACTATGAGCCAAGCATGAGTTCCCAAATGTCTGACATGATCCACTGGTTCCATGTAACA | |||||||||
gi|117244357|gb|CT849703.1|CT849703 CT849703 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): ATGACATACGACGGGTTCCTTAATTAGGGCTTACTCGGAGTACGCCTTAGCAGCCTGAAGCCAATAAATATATGTCCTTCCAATCATAACTATTAACGTTTAGAATTAAAACTTCTACTGTCAATTTTCTATTAAAACAAGTTTGCAAAATCTAATATCTAATAATTTTATGATATCATGACAGTATTATTTTACAAATATACTCTTACGATATTTTTAATTTTAAACTAAGCATTCACAAAGTTAATAATGGTCAAAGTTTCGAATTTTGGCCATTTTTTTGTCATAAATTATTAAATATGTATGAGCGGATTGCGGATCCAGTAATTAATTGTAACTTCAGTTTTCTTAACATGTGCCCGAAGTGGTATTAAGCCAAAATGCCATTAGAAATGCTTCATAGTAGTGATAGCAAATTAGGGCATGTTTAGTTGGCAAAAAATTTTGCCCCTACATATCATATCAAATATACGGACACACATTTAAAGTATTAAACGTAGTCTTCGCCAGGAAACTGCGGGACGAATTTATTAAGCCTAATTAATACGTCATTAGTAATGTTTACTGTAGCACCACATTGTCAATTCATGGCACAAAGTAGGCTTAAAAGATTCGTCTCATAATTTCCTAGCGAACTGTGTAATTGGTTTTTTCTACATTTAATACTCTATACATGTGCCCAAACATTCGATGTGATAGCGTGAAAATTTTTATTTGAAAACTAAGCATGCCCTTAGAAACGAATATAGTAAAATAAATATTTTAACTAGTCTTATCCAAGTCAATCGAGACAAAGTTAGTTTGCGTTATTCATTGTAAGGTCAAGTCTATCCTAGAATAAGATAAAAAAAAAAAAAA | |||||||||
gi|88663252|gb|CI479716.1|CI479716 CI479716 Oryza sativa (japonica cultivar-group) 4.5 leaf-stage leaf Oryza sativa Japonica Gro ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): AAATTTGAAGTATTAAACGTAGATTTAATAACAAAACAAATTACATATTCTGCTTGTAAACTGCGAGATGAATTTATTAAGCCTAATTAATCCGTCATTAGCAAATATTTACTGTAGCGCCACATTGTCAAATCATGGAGTAATTAGGCTTAAAAGATTCTGTTGATGTGAAAAACACACACTGGCCTGGAGATCTGCTTAACTCATATGTAGGTCCAAAATCTTGCTTTTAGGTTCGTGAGCGTGCCAGTTGATTTGATCCTTGCTCAAAGTCTTGCGGGTCTTGGCCTTCGCTTGGATCCGCAACTCCCTCGGGCTCTGTTAGTAGCAGAATGGCAGAGCCACCATAGTACTGGAATGAGACACAAGGGGCCGCACAGCCGCAGTACTCAAAGAGGCATGTAGCCAGCGAGTTGCCTGCTAA | |||||||||
gi|58664295|gb|CK052981.1|CK052981 54979rsicek_5818.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): GCACGAGGTCGGAATCGAATTATCCGATATACTAGTAGCAATATATTTCCATTTTGTTCCTCTTCTTCAGTTAATTAGTCTAGAATGGTAAGCTGTAATTTCTTGTGGGTAATACTAGTAGTATTATTATTCCTCATGCCTGTGCCAAAAAATTCCTTGTATAAATCAAGTTTACCTGAGTATGCTGTAAATTTGCACAAGGTGGAGTAGCACTAAGAGCTTGTTTAGTTCAAAAAAACATTATATCGAATCTTTAAATACATGCATAGAGCATTAAATATAGACAAATTAAAAAACTAATTGCACAATTTGTATGAAAATCGCGAGACGAATCTTTTAAGCATAATTAATCTATGATTAGCCATAATTGCTATATTAACTAATTAATTAGGCTTAATAAATTCGTTTTGTGGTTTTTAGGCGAGTTATGAAATTAGTTTTCTCATTCGTGTCCGAAAACCCCTTCCGACATCCGGTCAAACGTTCGATGTGATACCTTTAAACTTTTTTTTTCGCGAACTAAACACACCCTAAGTACCAA | |||||||||
gi|29664777|gb|CB661052.1|CB661052 OSJNEd03G21.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd03G21 3', mRNA sequence ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): CCAAAGAAAGGGGAAACAGTAGTGGTTGATTGGGATGGCTACACAATTGGATACTATGGTCGCATTTTTGAAGCTCGAAACAAGACCAAAGGTGGTTCCTTTGAGGGTGGTGATAAAGACTTCTTTAAATTTAAGATTGGATCAGGACAGGTCATACCAGCTTTTGAGGAGGCTATATCAGACATGGCTCCAGGTGGAGTTAGGAGGATAATAGTACCACCAGATCTTGGATACCCAGACAATGACTACAACAAGTTGGGTCCAAAACCAACGACATTTTCGGGACAAAGGGCTTTGGATTTTGTTTTGAGGAATCAAGGGTTGATAGATAAAACTCTCCTGTTTGACATTGAGCTTTTGAAGATTATACCAAGTCAATAGTACATGTATATGATGTTCATTTGTTCCTTTGAAAGGCAATGTTGCTGACCCCTTGGAGAAAAAACACACAAGTTTTTGGCGTCGTACCAGTACCAGTCGACATGTAAATATGGGCCTGTTTAGTTTTCAAACAAAATTTTTCACGCTGTCACATCGAATGTTTGGACCCATGCATAGTGTTAAATGTAGAAAAAAAAACCAATTACATAGTTCGACAGGAAATTGCGAGATGAATCTTTTAAGCTTAATTGCGCCAGGATTTGATAATGTGGTGCTACAATAAACATTTGTTGATGACGGATTAATTAGGCTTGATAAATTCGTCTCGAAGTTTTCTGGCAGAATCGTGTAATTTATTGGGTTATTAGACTAGCGTTTAAT | |||||||||
gi|66932230|gb|CX119078.1|CX119078 POLLNM01 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): TTTTATGATTTAGGGTCACGGATTAGATTTTGATCGCTTTTGAGGGTCACAAAGTGAACTTATTCCTTTGACATTTGCTGAGACCTACAGGTTGGTATGTTGCGCGGTAGTTCGTGCACCGCAAATAGAAAATGACAAAAGAAACACCACCACCGTGAATGCCAGAAAACAATGAGTGTGATGAGTAAGGACGAGACGAGGGAATCTGAAGTTGGGCCGCCCCTTCTCATTCTAGCTTAAGGCCTTGTTTACTCGGAGAAAATTTTTGGGTTTGGTTGTCACATCGGATATACAGACACACATTTAAAGTATCAAACGTAGTATAATAATAAAACAAATTACAGATTCTGTCAGAAAACTGCGAGACGAATTTATTAAGCCTAATTAATCCGTCTTATTAAGCCTAATTAATCCATCATTAGCAAATGTTTACTGTANNACCACATTGTCAAATCATGGCGTAATTAGGCTTAAAAGATTTGTCTCGCCCCCTACACACAAACTGTATAATTGGTTTTTTTCTTATCCACATTTAATACTCTATACATATTTCTAAACATTTTGATTGATGGGTGAAATGTTTTTGATTTGGGAACT | |||||||||
gi|112786886|gb|EE591632.1|EE591632 FU_RAH01b-1-H08.seq Rice mixture of leaf, root, panicle Oryza sativa Japonica Group cDNA, mR ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): TCTCCTGTTTGACATTGAGCTTTTGAAGATTATACCAAGTCAATAGTACATGTATATGATGTTCATTTGTTCCTTTGAAAGGCAATGTTGCTGACCACTTGGAGAAAAAACACACAAGTTTTTGGCGTCGTACCAGTACCAGTCGACATGTAAATATGGGCCTGTTTAGTTTCCAAACAAAATTTTTCACGCTGTCACATCGAATGTTTGGACACATGCATAGTGTTAAATGTAAACAAAAAAAAACCAATTACACAGTTCGACAGGAAATTGCGAGATGAATCTTTCAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|88555296|gb|CI485544.1|CI485544 CI485544 Oryza sativa (japonica cultivar-group) 1 week after flowering ear Oryza sativa Japon ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): GTTAAACATAGACTAATAACAAAACAAATTACAGATTCCCGCCTGTAAACTGCGAGACGAATTTATTGCCTAATTAATTCATCATTAGCAAATGTTTACTGTAGCATCACATTGTCAAATGTAATCAGACACAAAAGAATTGTCTCGCAATTTACATGCAAATTGTACAATTGTTTTTTTTCCAACATTTAATGCTCCATGCATGTGTCCAAACATTAGATGTGGCATTTTTGGCCAAAATTTTTTTGGAATCTGATAAGGCCAAAGAAGAGTAAGTTGTGCGAAAAGATTCTAGAATTATGAAAATTTGGTAATGGAGGCAACTTTTGGCATTGTTTAGATTGTTACCTTGCCAAAACTTGGTAAGGTTAGTTTCGGCAACAAAG | |||||||||
gi|88246675|gb|CI246524.1|CI246524 CI246524 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): AATTGACTACATGCATGCATGCCTTATATTATGAAACATCTAAAAAAATGGTTGTGCCTTATATTATGGAATGGAGGGAGTATTTGATATTAGGTCCTTCCCTAATATTCACGTTTTTTTATAATGAGCCGAGAGAGTTTGAACCTGGCAACAAAGGGCCTGTTTAGTTCGCGAAAAAAAAAAAATTTTGGATGTCACATCGGATGTTTGACCGGATATTGGAAAGAATTTTTGGACACGAATAAAAAAACTAATTTCATAACTCGTCTGGAAACCGCGAGACGAATCTTTTGAGCCTAATTAATCCGTCATTAGCACATGTGGGTTACTGTAGCACTTATGGCTAATCATGGACTAATTAGGCTTAAAAGATTCGTCTCGTGATTTCCTGCCTAATTGTGCAATTAGTTTTTTTATTTACCTATATTTAATACTTCATGCATATTTTCAAAGATTCGATGTGATGTTTTTGGAAAAAAAATTTGGGGAACTAAACGGGGCCCAAATTATGCAGGAGCATGTTTAATCATCCCA | |||||||||
gi|87009828|gb|CI310931.1|CI310931 CI310931 Oryza sativa (japonica cultivar-group) NAA treated callus Oryza sativa Japonica Grou ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): ACATTTGAAGTATTAAACGTATACTAATAACACAAACAAATTACAGATTTCATCTGTAAACTGCGATACGAATTTATTAAGCCTAATTAATCTATCATTAGCAAATGTTTAATGCAGCATCACATTGTCAAATCATGACGTAATTAGGCTCAAAGGATTTGTCTCACAATTTACATGCAAACTGTGCAATTGTTTTTCCTCACATTTATTGTTCCATGTGTCCGAACATTTGATGTGATGTTTTTGATCAAAAATTTTTAAATCTAAATAAGGCCATAAGGCTTAAAACCAAATACTCCTGAAATTTAACATTGTTNAATTTCAGTGGGGGTTCAAAAGTGGCAGCAATCTCTAAACATTGGATAGAACTTTTCTCCTTCGGCTATAGTGTCACTGTCCTCGCCTTCTCCGGCGAGCTCTCCTCCGCCGTCTCGTCCCTTCTCCGATGATCTCGCTGG | |||||||||
gi|86498740|gb|CI141373.1|CI141373 CI141373 Oryza sativa (japonica cultivar-group) mixed shoot (Normalized Library) Oryza sativa ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): AAAACAAATTACAGATTATGACTGTAAACCGCGAGACGAATTTATTAAGCCTAATTAATCCATCATTAGCAAATGTTTACTGTAGCATCATATTGTAAAATCATGGCGTAATTAGGCTCAAAAGATTCGTCTCACAATTTACATGCAAACTGTGCAATTGATTTTTTTCGTTCACATTTAATGCTCTATACATATGTCCAAACATTTAATGTGACGGAATTTTTAGAAGTTTGAAGGGAACAACATTTAATGCGACGGAATTTTTAGAAGTTTGAAGGGAACTTAAAAACTGCCTAAATCAATAAGAACAATGGTGTTACAATAAAAAATAATAGGTATACAGTGACTAGACTAGAGGGCAATTGGGATTTGGGATTGCTTCATTTATGATGTATCCAAGGCCAACTATGTTGAACGACCCCATGAATGAGTAAAACCCCACAGCTCAACATTCTTCAGTTCAAAATCTGGACTATGAGCCAAGCATGAGTTCCCAAATGTCTGACATGATCCACTGGTTCCATGTAACAAATCTTCATCGAGGCACAACGCGAAACTCCCACCTCCTCCAAATGCCAAAGCATCATTCAAGCATAAGTAGTAGTACCTGTTGGCACCGGTTGGTCTGAAAAGCCTAGGTTCACCATAAA | |||||||||
gi|88264753|gb|CI368527.1|CI368527 CI368527 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): CCTCAAAAACATCACATCAAATCTTTGAACACATGTATAAAACATTAAATATAGATAAAAACAAAAACCTAACTCGTATAGTTTGCATGGAAATCGCGAGACGAATCTTTTAAGCTTACAGTAACCCAGGTGTGTTAATGATGGCTTAATTAAGCTCAAAAGATCCGTCTCACGGTTTCCAGACGAGTTATGAAATTAGTTTTTTTATTTGTGTTCGGAAACCCCTTCTGACATCCGATCAAACATCTAGCGTGACACCGAAAAATTTTCTTTTCACGAACTAAACACATCCATAAACCAGGTTGCAGAACATTGACAGCGGCGATAAGGTTAGCTCGGTTAGGTTCAACCGTACCTGGACTGGAACAGCATCGTCCTCCTCCTCTCCTTCTGTGTCTCTCCTCGCGCGGTCGCCTTCGCTTACGCCTTACTCCAGGAGC | |||||||||
gi|88222215|gb|CI222171.1|CI222171 CI222171 Oryza sativa (japonica cultivar-group) mixed callus (Normalized Library) and mixed s ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): TTTTTAAAGAAATAAGCAATTGTCAAGCTTCGAAATCCACACGGCAATCGGCAACCACCAGACATTTGGTGTTAACTCAAAAGATAAACATATGGTAGCACAATCTTGAATTATCGGTAAGATGAAAAAAAGAAGAGAACTTCTAAAGTCAATCTTGAATGGCAGCACAATCCATTCGCCTCACTCGCACTTGCCATTCCACTCCAACTCTCCTCTACCTGCAGCGAGCTGCCATTCCCCTCCAACTCCCCTCTACCTGTAGCACATTTTTAGCAGCAGATTGGTCATATCATCAAAACATCAATCTATTCATGAACCTGCAAGGCAAATTGCTTTAGGCTGTGTTTAGATCCAGGGGTGAAAATTTTTGTCGTGACACATCGGATATACGGACACACATTTGAAGTACTAAACGTAGTCTAATAAATAAAACAAATCATAGATTCCGCCTGTAAACTGCGAGACAAATTTATTAAGCCTAATTAATCCATCATTAGCAAATGTTTACT | |||||||||
gi|88692081|gb|CI735656.1|CI735656 CI735656 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): GGTCGCATTCTACAGGTACCTGTAGACGGAAGAACTCTGCTTTCGGAACCAAAATAAGGGCATGTCTAGTTCCAAACAACATTCTTCACGCTGTCACATCAAATTTGGACACATGCATGAACTACTAAATGTAGAAAAAAACTACTTACACAGTTTGTCAGGAAGTTGCGACACGAATCTTTCAAGGCTAATTGCGCTATGATTTGATAATGTAGTGCTACCGTAAACATTTGCTAATGACGGATCAATTACGTTCAATAAATTCGTCTCGCACTCTCCTGGCGGAATTTTCAATTTGTTTTGTTATTAAACAACGTCCAATAGTTAAAATGTGTGTCTGTCTATCCAATGTGACATNG | |||||||||
gi|300215881|gb|HO088507.1|HO088507 S302-T7promoter Subtracted cDNA library from Indica rice variety Suraksha Oryza sativa Indic ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): ATCAATGAACCCTGGCTATTTTTAGTTCGTGTGTCAAAATTTTTTGAAGTATATGGACACATATTTGAAGTATTAAACGTAGACTAATAACAAAACAAATTACAGATTCCGCCTATAAACTGCGAGACGAATCTATTAAGTCTAATTAATATGTCATTAGCAAATATTTACTGTAGCACCACATTGTCAAATCATGGTGTAATTAGGCTCAAAAGATTCGTCTCACGATTTACATGCAAACTGTGCAATTGGTTCTTCCATATTGAATGCTTCATGGATGTGTCCAAACATTTGATGTGACGGAAAAGTTGTAGGTTTAAAGAAAAAAATTTGAATCTAAACACGGCCGCTGTCTGTTATTGTGCGCTGCCACTCAGGCCCTGTTTCTTTCAGCTTGGGATTATTATAATCTAGATTATTGAGTCAGACTACAATAAACTAGATTGTTATAATCTGTAGTAGAATAAGTGGTTAGTTGTTTCTTTTCTAGATTATTAGAGTCTAGATTATTGGGTTTGCAAGTCTAAAGAGGGAGTGGGGTGGCATGGTGGGTAATTTTTTTTCCCAATAATTTGGAAAAAGCTCATCTAAATGAGCTTATCAGATTATAATAAGCTGGGCTCTAAATTATAATAAGCTAATTCAATAAGTTGTCTGTTTCTTTCAGCTTACTTCTAATAATCTGGATTATAATTATCCCAAGCTAAAAGAAACAGGGCCTTAATAACGTTGTTTCCGTGTGTTTTTTTTTTGCTTATTCCCAAGTATTAGTTTCTAG | |||||||||
gi|88345448|gb|CI656106.1|CI656106 CI656106 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): TTTAGATCTAGGGGTGTAAAGTTTTGACATGTCACATCGGATATACAGACACACATCTGAAGTATTAAACATAGACTAATAACAAAATAAATTATATAATCCACCTGTAAACCGCGAGACGAATTTATTAAGCCTAATTAATCCATCATTAGTAAATGTTTACTATAGCACCACATTGTTAAACCTATGGCGTAATTAGGCTTAAAAGATTCGCCTCATAATTTACATTCAATCTGTGTAATCAGTTATTTTTTCGTCTATATTTAATACTCCAATACTCTATACATATCACGTGTCCAATCATTCGATGTGATATGGTGTAAAATTTTACTATGAGATCTGAACAGGGCCATACTATCTGCGTACGTTGATGGCAGTCTTGACATGAGGTATCATGCAGATG | |||||||||
gi|66922917|gb|CX109765.1|CX109765 EI002M13 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): TGAAAAAAAAACCAATTACACTTGTTGTGTGTAAATTGCGAGACGAATCTTTTAAGGCTAATTGCGCCATGATTTGACAATGTGTTGCTACAGTAAACATTTGCTAATGACGGATTAATTAAGCTTAATAAATTTGTCTCGCAGTTTACAGGCGGATTATGTAATTTGTTTTGTTATTAGACTATGTTTAATACTTCAAATGTGTCTCCGTATATCCGATGTGACACGCCAAAACTTTACACCCTGAATCTAAACACCCCCTAAGTCAGTCATTTTGGTTCTGAGACTAATTTTGTCATGAAACCTGTCCTGTTAAGCTTATAGTTGTTGGGTCAGCTATTCAATGTTGCCTATTTCAATCTTTGCACCTCCTCTCAAGTTATAACTGTACTGTAAGTTTATATGGTTCACTGTAAATCTTGCCTTCTCGACCACCTCTTAAGAATGGTAAATTTCTATATGTATGTAATTCCTGTGAAAAGAACAGAAATTTTCATCTTAGTCATAGGCTCATATTGTCATTGTAGTGTGGTACTGGATGGTTATTCAAGTCCCAATACTTGTATTGGAAGTTTGAT | |||||||||
gi|88724537|gb|CI747796.1|CI747796 CI747796 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): GTGGCTTTATATTGTTTGTTCAGATCCCTCTACTATTTCTTTCTGCATCCGCCANTGGGTCCGTGGGCAGTCGTGCCATGCTAGACTACAAGTTGAGGCACAGGCCCAAGTTTGGCATGGGCCAGCCAACATGCGGTGCCGTGCCTAGGTCAGGCTGCCAGCATGCCTCGGGCCGATCCAATCCATTTGGTCACTGGGCCTGTTTAGTTCCAAAAAGTTTTTCCCTAAAACATCACATCGAATATTTGAAGATATGTATGGAGCATTAAATGTAGATGGAAAAAACTAATTGTACAGTTATGATGGAAATCGCGAGATGAATCTTTTGAGCTTAATTAGTCCATTATTAGC | |||||||||
gi|89161443|gb|CI099415.1|CI099415 CI099415 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): TCTCAAAAACATCACATCAAATCTTTGAACACATGTATAAACATTAAATATAGATAAAACAAAAACTAATCGTATAGTTTGCATGGAAATCGCGAGACGAATCTTTTAAGCTTACAGTAACCCACGTGTGTTAATGATGGCTTAATTAAGCTCAAAAGATCCGTCTCACGGTTTCCAGACGAGTTATGAAATTAGTTTTTTTATTTGTGTTCGGAAACCCCTTCTGACATCCGATCAAACATCTAGCGTGACACCGAAAAATTTTCTTTTCACGAACTAAACACATCCATAAACCAGGTTGCAGAACATTGACAGCGGCGATAAGGTTAGCTCGGTTAGGTTCAACCGTACCTGGACTGGAACAGCATCGTCCTCCTCCTCTCCTTCTGTGTCTCTCCTCGCGCGGTCGCCTTCGCTTACGCCTTACTCCAGGAGCTGTAAATAATCCTGAACAGGGAAAAATCGGGCTCATCCGTCGAGCAGCTGCCTTCCTGCCTGCTCCGATCAGTCCACCTCTCT | |||||||||
gi|88507094|gb|CI434600.1|CI434600 CI434600 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated (9.5min), a ATTCGTCTCGCGGTTTCCAGA EST sequence (targeted fragment marked with yellow): GTCCACCTGTAAACCGCGAGACGAATTTATTAAGGCTAATTAATCCGCCATTAACAAATATTTACTGTAGCACCACATTGTCAAATCATGGCGTATTAGGCTCAAAAGATTCGTCTCGCAATTTACATGCAAACTGTGCAACTGGTTTTTTTTCGTCCACATTAATACTCTATGCATGTGTCCAAACATTTGATGTGACGGAATTTNTGAAAGTTCGAAGGGAACTAATCACAGCCATAGATTACATTTACCATGCTGCTAGGATTAATCATGTCATGGTTTTTGCTCTCAACAAATCAGTGATGGTGGTGGATAGCAGTCAAAATTGGGGGATCAGCATAAGGACCATAGAGCCACCCCTTGGCAACGAACCGGTTGATGGCCTCCGTGTAGTGAATCCCATCCCAGGATATTGAG | |||||||||