| mature miRNA: ATTGGGACTTGTGCTGGGAC species: Physcomitrella patens database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|208387869|gb|DC929213.1|DC929213 DC929213 ppgs full-length cDNA library; green sporophytes Physcomitrella patens subsp. paten ATTGGGACTTGTGCTGGGAC EST sequence (targeted fragment marked with yellow): GACTGTTTCGTTGATGAGACTTATTGAGCGGTTTCAAGAGCTTGCGGGTGACGGCGGTCGAGAAAGTGTTGAGGGCGACGGAGGAAGGGAGACGTGTGGGGTTAGTTGTAGTCTTTGGGGCTGGGAAGAGTTGTTGGACCATTGCTGTTACATGCCGCTTCTCCTTTGTCACTATCATGCACGGATTTGGTGGTGGGCACCTCGATCATCGGCTCACGTTTGAACTTCGTATACCGCCGATGGCTGGCTAGACTCCAGATATGTCAGATTGAGCAACCCTGCTGAGAGGATGAGTAGAGATCACGAGTCNGTGCGAGATAGGTGTACGATCCAAATTCTGTTTCCGCGAANGGTGTCAACCCTGTTTGAAGAGCTGCTTTGAGTGNAAGGCAGCGTGAGGTTCTGTTGGATTGTANTGTCCTGTATCCATGGCTACTANAGCTATGGTGTCNTTGGTGATCCTACTCTTCCTGTCGTGTGCACCGCTCGTCCCGGCTCAAGTGCCAAGTCCAGCTCCTGCCGTGTTCACCCCTGTTGCACCGCCACCCGCCAAGGTCACGCCACCCATCGTCTGTACACTTCCGAACACCACAATGATCTCCCCCAACTACTGTAATGCCCATGACGAGCAGAGCATGGAGAATCACACAGCAGTCTGTGACGGTTTCCTGACAATGTCCGNGGACATTCCTAATGCAAAGTGTTGCACAGGTCTGAACAATGTCGCTTAC | |||||||||