mature miRNA: CAAAAGTTGTTGGGTTTGACC species: Helianthus ciliaris database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|125419618|gb|EL431590.1|EL431590 CHCS6056.b1_P02.ab1 CHC(LMS) Texas blueweed Helianthus ciliaris cDNA clone CHCS6056, mRNA se CAAAAGTTGTTGGGTTTGACC EST sequence (targeted fragment marked with yellow): GGGCATGGGAGGAAATAAAGACTTGTCACATGTTTCTTGACGTACCATACCCTCTCGTCGTCATTTCAAGATATGGATATTGAAGACCAAAACGGATTTACAAAGATGAAGAGAAAGGAAGGAGAAGGAATCAGTCTCCCACCATTTGGATTGGTTACTTACAAGATGCAAGGCGACATTTGGACCGCAAATAGGAATACAAATGACCAAGAGAAGCTAGTTTCACTTGCGAGCGTGGCTGATTCCTGGTTGAGACAATTAGGCGTCCAACATCATGATTTTAACCACTTTGTGGGGAATCGTCGTGGTTAAAACTAACAACATTTGACATTGAAAGAGATATGTTCAAACCCGTACCAGAGATTCGACTTATCATCGTCACATCCCTTGTGGGCTTTTCGACTTTTTTACACATGGAGAGAGGCTGTTATGTTTAGATGGAACAGGGTTTTGCCATTGTTGAGCTTGTGTGTTAGACTTTCTTTTTCCTAGTTCTAGTCTTGCTTATTTGGCCAACCTTATCCTTTGGGTTTATTTGCAAAATGTTTTAGGTTTTGAAGAACCTTGAATGGAGAAAGGGGGAATTGTGTACATTGAGGAATCTAATGAATGGGAGAGAGACACTTATGAGAAAAAA |