miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: CAACAACAACAAGAAGAAGAAGAT
species: Triticum aestivum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|239862329|gb|GR304714.1|GR304714 WRIS_5329 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis

CAACAACAACAAGAAGAAGAAGAT
|||||||||||||| . ||||||
GTTGTTGTTGTTCTGTCTCTTCTT

EST sequence (targeted fragment marked with yellow):
GAGAGATAGAGATTGAAGATGATGCTCCAAAACGGAAGCCATCATTGGAGGAAATTGATGCATTGGAGGAGGCCCGGCTGGCAATTGAGTACATTGTAATCCCAGGCGGGGAGCCCGTCGAACTCCTCCCAAGGTGTTCAGAGATTGTTGCTCGTCAGCTGGAGCTTGTAGAGAGCTACCAGCTCCTCGCCGAGACCTTCGGAACCGACCCCAATTCGAGGCTGCAGATTCTTCCAGTGAAAATAGCAAAGAAGAGCTCGGGTCAGGGCGCTCAGGGGCCGACGTCCACCAAGAAGAACGGCTCGGATCTGATTGTCAGCGAGAATGGTGGAGGCTTCAGCTCCCCCCGGCTGCCATTTCTGCCGAAGTGACACCTTAGTTTGACACTCTGATCACCGTTGCCGAAATGTAAAACACCATTCTTCTCCCTTCTTCTCTGTCTTGTTGTTGTTGTTGTACAGCGCTGTGCACAGTGGTGTAAATAGTGTTTTAATGTCCAAGAATCGAAAGAGCAAAGCTAATTGTAATTGCCTTCCATTCTTTTACTAAAATAAAGCTCCTCACATCCTGTAATCTGTAGTTGTATATAGCTCAGCTGGATTTGGTCTGTTGACT